RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 SCN2AQ99250 2005 aa16.89■□□□□ 0.29
HMGA1-205ENST00000447654 HPRT1P00492 218 aa16.88■□□□□ 0.29
HMGA1-205ENST00000447654 CSNK1A1P48729 337 aa16.88■□□□□ 0.29
HMGA1-205ENST00000447654 KLF3P57682 345 aaPredicted RBP16.88■□□□□ 0.29
HMGA1-205ENST00000447654 TRMT12Q53H54 448 aaKnown RBP16.88■□□□□ 0.29
HMGA1-205ENST00000447654 VN1R4Q7Z5H5 301 aa16.88■□□□□ 0.29
HMGA1-205ENST00000447654 SLC22A24Q8N4F4 322 aa16.88■□□□□ 0.29
HMGA1-205ENST00000447654 MRGPRDQ8TDS7 321 aa16.88■□□□□ 0.29
HMGA1-205ENST00000447654 NKX3-1Q99801 234 aaPredicted RBP16.88■□□□□ 0.29
HMGA1-205ENST00000447654 RAB11FIP5Q9BXF6 653 aa16.88■□□□□ 0.29
HMGA1-205ENST00000447654 KIR3DX1Q9H7L2 352 aa16.88■□□□□ 0.29
HMGA1-205ENST00000447654 GPR84Q9NQS5 396 aa16.88■□□□□ 0.29
HMGA1-205ENST00000447654 FANCMQ8IYD8 2048 aa16.88■□□□□ 0.29
HMGA1-205ENST00000447654 SHISA7A6NL88 538 aa16.88■□□□□ 0.29
HMGA1-205ENST00000447654 A8MVM7 634 aa16.88■□□□□ 0.29
HMGA1-205ENST00000447654 PNPP00491 289 aa16.88■□□□□ 0.29
HMGA1-205ENST00000447654 TMEM225BP0DP42 221 aa16.88■□□□□ 0.29
HMGA1-205ENST00000447654 ALDH3B1P43353 468 aa16.88■□□□□ 0.29
HMGA1-205ENST00000447654 FAM3BP58499 235 aaPredicted RBP16.88■□□□□ 0.29
HMGA1-205ENST00000447654 CTXN1P60606 82 aa16.88■□□□□ 0.29
HMGA1-205ENST00000447654 PMS2P11Q13670 270 aa16.88■□□□□ 0.29
HMGA1-205ENST00000447654 NKAIN1Q4KMZ8 207 aa16.88■□□□□ 0.29
HMGA1-205ENST00000447654 ALG10Q5BKT4 473 aa16.88■□□□□ 0.29
HMGA1-205ENST00000447654 ARMC6Q6NXE6 501 aa16.88■□□□□ 0.29
HMGA1-205ENST00000447654 ARHGEF39Q8N4T4 335 aa16.88■□□□□ 0.29
HMGA1-205ENST00000447654 CLDND2Q8NHS1 167 aa16.88■□□□□ 0.29
HMGA1-205ENST00000447654 FLVCR1-AS1Q8TAF5 88 aa16.88■□□□□ 0.29
HMGA1-205ENST00000447654 CNTD2Q9H8S5 307 aa16.88■□□□□ 0.29
HMGA1-205ENST00000447654 GRHPRQ9UBQ7 328 aa16.88■□□□□ 0.29
HMGA1-205ENST00000447654 COL4A2P08572 1712 aa16.88■□□□□ 0.29
HMGA1-205ENST00000447654 TMEM14DPA8MWL7 114 aa16.87■□□□□ 0.29
HMGA1-205ENST00000447654 CA11O75493 328 aa16.87■□□□□ 0.29
HMGA1-205ENST00000447654 UMODP07911 640 aa16.87■□□□□ 0.29
HMGA1-205ENST00000447654 VSIG8P0DPA2 414 aa16.87■□□□□ 0.29
HMGA1-205ENST00000447654 CPMP14384 443 aa16.87■□□□□ 0.29
HMGA1-205ENST00000447654 GLRA1P23415 457 aa16.87■□□□□ 0.29
HMGA1-205ENST00000447654 OR3A2P47893 321 aa16.87■□□□□ 0.29
HMGA1-205ENST00000447654 OR5I1Q13606 314 aa16.87■□□□□ 0.29
HMGA1-205ENST00000447654 NFATC4Q14934 902 aa16.87■□□□□ 0.29
HMGA1-205ENST00000447654 PATE1Q8WXA2 126 aa16.87■□□□□ 0.29
HMGA1-205ENST00000447654 IMMP2LQ96T52 175 aa16.87■□□□□ 0.29
HMGA1-205ENST00000447654 AMELYQ99218 206 aa16.87■□□□□ 0.29
HMGA1-205ENST00000447654 OR2J1Q9GZK6 312 aa16.87■□□□□ 0.29
HMGA1-205ENST00000447654 TMEM74BQ9NUR3 256 aa16.87■□□□□ 0.29
HMGA1-205ENST00000447654 PADI1Q9ULC6 663 aa16.87■□□□□ 0.29
HMGA1-205ENST00000447654 SCGB1D1O95968 90 aa16.87■□□□□ 0.29
HMGA1-205ENST00000447654 MBPP02686 304 aaPredicted RBP16.87■□□□□ 0.29
HMGA1-205ENST00000447654 TMEM11P17152 192 aa16.87■□□□□ 0.29
HMGA1-205ENST00000447654 HNF1AP20823 631 aa16.87■□□□□ 0.29
HMGA1-205ENST00000447654 EMDP50402 254 aa16.87■□□□□ 0.29
HMGA1-205ENST00000447654 FBXW12Q6X9E4 464 aa16.87■□□□□ 0.29
HMGA1-205ENST00000447654 LPAR4Q99677 370 aa16.87■□□□□ 0.29
HMGA1-205ENST00000447654 AK3Q9UIJ7 227 aa16.87■□□□□ 0.29
HMGA1-205ENST00000447654 HEATR5AQ86XA9 2040 aa16.86■□□□□ 0.29
HMGA1-205ENST00000447654 NSG1A0A0A6YYJ2 146 aa16.86■□□□□ 0.29
HMGA1-205ENST00000447654 TRAV1-1A0A0B4J248 108 aa16.86■□□□□ 0.29
HMGA1-205ENST00000447654 C20orf202A1L168 122 aa16.86■□□□□ 0.29
HMGA1-205ENST00000447654 A6NCN8 305 aa16.86■□□□□ 0.29
HMGA1-205ENST00000447654 B4E171 279 aa16.86■□□□□ 0.29
HMGA1-205ENST00000447654 TNFSF13O75888 250 aa16.86■□□□□ 0.29
HMGA1-205ENST00000447654 NKX2-2O95096 273 aa16.86■□□□□ 0.29
HMGA1-205ENST00000447654 MMP7P09237 267 aaPredicted RBP16.86■□□□□ 0.29
HMGA1-205ENST00000447654 PI3P19957 117 aa16.86■□□□□ 0.29
HMGA1-205ENST00000447654 GALNSP34059 522 aa16.86■□□□□ 0.29
HMGA1-205ENST00000447654 PTGER4P35408 488 aa16.86■□□□□ 0.29
HMGA1-205ENST00000447654 CEBPGP53567 150 aa16.86■□□□□ 0.29
HMGA1-205ENST00000447654 HIST1H3AP68431 136 aa16.86■□□□□ 0.29
HMGA1-205ENST00000447654 GBGT1Q8N5D6 347 aa16.86■□□□□ 0.29
HMGA1-205ENST00000447654 OR2G3Q8NGZ4 309 aa16.86■□□□□ 0.29
HMGA1-205ENST00000447654 RNASE8Q8TDE3 154 aaKnown RBP16.86■□□□□ 0.29
HMGA1-205ENST00000447654 HOXB13Q92826 284 aaPredicted RBP16.86■□□□□ 0.29
HMGA1-205ENST00000447654 ZNF2Q9BSG1 426 aaPredicted RBP16.86■□□□□ 0.29
HMGA1-205ENST00000447654 SLC5A6Q9Y289 635 aa16.86■□□□□ 0.29
HMGA1-205ENST00000447654 NKX6-3A6NJ46 265 aa16.85■□□□□ 0.29
HMGA1-205ENST00000447654 HIST1H1DP16402 221 aaKnown RBP16.85■□□□□ 0.29
HMGA1-205ENST00000447654 ZNF43P17038 809 aa16.85■□□□□ 0.29
HMGA1-205ENST00000447654 C1QL3Q5VWW1 255 aa16.85■□□□□ 0.29
HMGA1-205ENST00000447654 LRRC69Q6ZNQ3 347 aa16.85■□□□□ 0.29
HMGA1-205ENST00000447654 SMIM15Q7Z3B0 74 aa16.85■□□□□ 0.29
HMGA1-205ENST00000447654 NUP54Q7Z3B4 507 aa16.85■□□□□ 0.29
HMGA1-205ENST00000447654 OR14L1PQ8NHC6 308 aa16.85■□□□□ 0.29
HMGA1-205ENST00000447654 HAS2Q92819 552 aa16.85■□□□□ 0.29
HMGA1-205ENST00000447654 EXTL1Q92935 676 aa16.85■□□□□ 0.29
HMGA1-205ENST00000447654 PRO3102Q9H379 93 aa16.85■□□□□ 0.29
HMGA1-205ENST00000447654 SDF2L1Q9HCN8 221 aa16.85■□□□□ 0.29
HMGA1-205ENST00000447654 LOC102723971A0A1B0GUV8 181 aa16.85■□□□□ 0.29
HMGA1-205ENST00000447654 CBR3O75828 277 aa16.85■□□□□ 0.29
HMGA1-205ENST00000447654 AMY2BP19961 511 aa16.85■□□□□ 0.29
HMGA1-205ENST00000447654 CMPK1P30085 196 aa16.85■□□□□ 0.29
HMGA1-205ENST00000447654 GABRA3P34903 492 aa16.85■□□□□ 0.29
HMGA1-205ENST00000447654 RAB38P57729 211 aa16.85■□□□□ 0.29
HMGA1-205ENST00000447654 VAMP2P63027 116 aa16.85■□□□□ 0.29
HMGA1-205ENST00000447654 FBXO42Q6P3S6 717 aa16.85■□□□□ 0.29
HMGA1-205ENST00000447654 P4HA3Q7Z4N8 544 aa16.85■□□□□ 0.29
HMGA1-205ENST00000447654 FAM160A2Q8N612 972 aaPredicted RBP16.85■□□□□ 0.29
HMGA1-205ENST00000447654 ORAOV1Q8WV07 137 aa16.85■□□□□ 0.29
HMGA1-205ENST00000447654 TBL1XR1Q9BZK7 514 aa16.85■□□□□ 0.29
HMGA1-205ENST00000447654 AURKAIP1Q9NWT8 199 aaPredicted RBP16.85■□□□□ 0.29
HMGA1-205ENST00000447654 TMEM238LA0A1B0GVL6 79 aa16.84■□□□□ 0.29
HMGA1-205ENST00000447654 HCRTR2O43614 444 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms