RNA–Protein interactions for RNA: ENST00000447578.6

VPS29-202, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 996 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-202ENST00000447578 RGS5O15539 181 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 CDRT1O95170 752 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 SLC2A10O95528 541 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 TNFP01375 233 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 IGHG4P01861 327 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 APOA1P02647 267 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 P04436 131 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 CRYGBP07316 175 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 MELTFP08582 738 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 HOXC4P09017 264 aaPredicted RBP3.22□□□□□ -1.89
VPS29-202ENST00000447578 SLC35G6P0C7Q6 338 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 SMIM10L1P0DMW3 83 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 SPNP16150 400 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 UGT2B7P16662 529 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 PTNP21246 168 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 ETV5P41161 510 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 MAP3K8P41279 467 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 CRYBB2P43320 205 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 GPR4P46093 362 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 OMPP47874 163 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 TGM4P49221 684 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 STARP49675 285 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 ETV1P50549 477 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 PRKXP51817 358 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 DEFA1P59665 94 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 DEFA3P59666 94 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 RPS25P62851 125 aaKnown RBP3.22□□□□□ -1.89
VPS29-202ENST00000447578 MRPS11P82912 194 aaKnown RBP3.22□□□□□ -1.89
VPS29-202ENST00000447578 HOXC5Q00444 222 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 MXD1Q05195 221 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 PRKCDQ05655 676 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 CDC20Q12834 499 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 TSPAN31Q12999 210 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 DEFB134Q4QY38 66 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 TMEM31Q5JXX7 168 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 CCNJQ5T5M9 372 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 OR2G6Q5TZ20 316 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 RNLSQ5VYX0 342 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 ZNF613Q6PF04 617 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 ZNF836Q6ZNA1 936 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 RASSF6Q6ZTQ3 369 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 TIPARPQ7Z3E1 657 aaKnown RBP3.22□□□□□ -1.89
VPS29-202ENST00000447578 VN1R4Q7Z5H5 301 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 BIVMQ86UB2 503 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 NKAIN4Q8IVV8 208 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 ZFP41Q8N8Y5 198 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 CSNK1G2-AS1Q8NCQ2 148 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 PROKR2Q8NFJ6 384 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 OR7G2Q8NG99 324 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 OR4K14Q8NGD5 310 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 OR52H1Q8NGJ2 320 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 OR8D4Q8NGM9 314 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 UFD1Q92890 307 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 TMEM203Q969S6 136 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 RERGQ96A58 199 aaPredicted RBP3.22□□□□□ -1.89
VPS29-202ENST00000447578 FAM131CQ96AQ9 280 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 SMIM10Q96HG1 83 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 C18orf12Q96KH6 178 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 BMFQ96LC9 184 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 MS4A4EQ96PG1 132 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 TAPBPLQ9BX59 468 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 PRRG3Q9BZD7 231 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 PLA2G12AQ9BZM1 189 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 SLC38A1Q9H2H9 487 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 PPA2Q9H2U2 334 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 ANKRD19PQ9H560 264 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 RERGLQ9H628 205 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 TMEM185BQ9H7F4 350 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 ADAP2Q9NPF8 381 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 RPRD1BQ9NQG5 326 aaKnown RBP3.22□□□□□ -1.89
VPS29-202ENST00000447578 CUTCQ9NTM9 273 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 QPCTLQ9NXS2 382 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 SCML1Q9UN30 329 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 COPS3Q9UNS2 423 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 ZNF443Q9Y2A4 671 aaPredicted RBP3.22□□□□□ -1.89
VPS29-202ENST00000447578 LSM2Q9Y333 95 aaKnown RBP3.22□□□□□ -1.89
VPS29-202ENST00000447578 UGT2A1Q9Y4X1 527 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 CSDC2Q9Y534 153 aaKnown RBP3.22□□□□□ -1.89
VPS29-202ENST00000447578 DENND4CQ5VZ89 1909 aa3.22□□□□□ -1.89
VPS29-202ENST00000447578 IGHV3OR16-10A0A075B7F0 116 aa3.21□□□□□ -1.9
VPS29-202ENST00000447578 A0A1B0GUS0 222 aa3.21□□□□□ -1.9
VPS29-202ENST00000447578 LINC00854A0A1B0GVQ3 168 aa3.21□□□□□ -1.9
VPS29-202ENST00000447578 CCDC182A6NF36 153 aa3.21□□□□□ -1.9
VPS29-202ENST00000447578 VSTM2BA6NLU5 285 aa3.21□□□□□ -1.9
VPS29-202ENST00000447578 C2orf74A8MZ97 194 aa3.21□□□□□ -1.9
VPS29-202ENST00000447578 EPM2AB3EWF7 344 aa3.21□□□□□ -1.9
VPS29-202ENST00000447578 IDSB3KWA1 339 aa3.21□□□□□ -1.9
VPS29-202ENST00000447578 B4DXG7 233 aa3.21□□□□□ -1.9
VPS29-202ENST00000447578 TRDCB7Z8K6 153 aa3.21□□□□□ -1.9
VPS29-202ENST00000447578 ZNF670-ZNF695F2Z2N8 137 aa3.21□□□□□ -1.9
VPS29-202ENST00000447578 H0YGG7 62 aa3.21□□□□□ -1.9
VPS29-202ENST00000447578 H7C423 109 aa3.21□□□□□ -1.9
VPS29-202ENST00000447578 L7N2F9 121 aa3.21□□□□□ -1.9
VPS29-202ENST00000447578 SLC17A2O00624 439 aa3.21□□□□□ -1.9
VPS29-202ENST00000447578 AQP9O43315 295 aa3.21□□□□□ -1.9
VPS29-202ENST00000447578 HCN1O60741 890 aa3.21□□□□□ -1.9
VPS29-202ENST00000447578 CTAG2O75638 210 aa3.21□□□□□ -1.9
VPS29-202ENST00000447578 KCNK2O95069 426 aa3.21□□□□□ -1.9
VPS29-202ENST00000447578 OR5F1O95221 314 aa3.21□□□□□ -1.9
VPS29-202ENST00000447578 PTTG1O95997 202 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms