RNA–Protein interactions for RNA: ENST00000443785.5

PAXBP1-204, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-204ENST00000443785 RAB11FIP2Q7L804 512 aa16.52■□□□□ 0.24
PAXBP1-204ENST00000443785 GJC3Q8NFK1 279 aa16.52■□□□□ 0.24
PAXBP1-204ENST00000443785 NAA11Q9BSU3 229 aaPredicted RBP16.52■□□□□ 0.24
PAXBP1-204ENST00000443785 SMOC1Q9H4F8 434 aa16.52■□□□□ 0.24
PAXBP1-204ENST00000443785 ZNF175Q9Y473 711 aa16.52■□□□□ 0.24
PAXBP1-204ENST00000443785 CCDC187A0A096LP49 1063 aa16.52■□□□□ 0.24
PAXBP1-204ENST00000443785 DHHO43323 396 aa16.52■□□□□ 0.24
PAXBP1-204ENST00000443785 SNAPINO95295 136 aa16.52■□□□□ 0.24
PAXBP1-204ENST00000443785 TLE1Q04724 770 aa16.52■□□□□ 0.24
PAXBP1-204ENST00000443785 UBALD1Q8TB05 177 aa16.52■□□□□ 0.24
PAXBP1-204ENST00000443785 hCG_1809904A0A1W2PP81 198 aa16.52■□□□□ 0.23
PAXBP1-204ENST00000443785 A0A1W2PR64 198 aa16.52■□□□□ 0.23
PAXBP1-204ENST00000443785 A0A1W2PRV1 198 aa16.52■□□□□ 0.23
PAXBP1-204ENST00000443785 OR7C1O76099 320 aaPredicted RBP16.52■□□□□ 0.23
PAXBP1-204ENST00000443785 SMCO1Q147U7 214 aa16.52■□□□□ 0.23
PAXBP1-204ENST00000443785 RPUSD3Q6P087 351 aaKnown RBP16.52■□□□□ 0.23
PAXBP1-204ENST00000443785 LHFPL1Q86WI0 220 aa16.52■□□□□ 0.23
PAXBP1-204ENST00000443785 ADAMTS17Q8TE56 1095 aa16.52■□□□□ 0.23
PAXBP1-204ENST00000443785 ASB13Q8WXK3 278 aa16.52■□□□□ 0.23
PAXBP1-204ENST00000443785 ABHD14AQ9BUJ0 271 aa16.52■□□□□ 0.23
PAXBP1-204ENST00000443785 CNTNAP3Q9BZ76 1288 aa16.52■□□□□ 0.23
PAXBP1-204ENST00000443785 WFDC1Q9HC57 220 aa16.52■□□□□ 0.23
PAXBP1-204ENST00000443785 CACNA1DQ01668 2161 aa16.51■□□□□ 0.23
PAXBP1-204ENST00000443785 A0A096LPE4 126 aa16.51■□□□□ 0.23
PAXBP1-204ENST00000443785 A0A1W2PPZ6 126 aa16.51■□□□□ 0.23
PAXBP1-204ENST00000443785 GPR37O15354 613 aa16.51■□□□□ 0.23
PAXBP1-204ENST00000443785 TAS2R46P59540 309 aa16.51■□□□□ 0.23
PAXBP1-204ENST00000443785 SPIN3Q5JUX0 258 aa16.51■□□□□ 0.23
PAXBP1-204ENST00000443785 RTN4IP1Q8WWV3 396 aaPredicted RBP16.51■□□□□ 0.23
PAXBP1-204ENST00000443785 CHRDQ9H2X0 955 aa16.51■□□□□ 0.23
PAXBP1-204ENST00000443785 KIAA2026Q5HYC2 2103 aa16.51■□□□□ 0.23
PAXBP1-204ENST00000443785 DCHS1Q96JQ0 3298 aa16.51■□□□□ 0.23
PAXBP1-204ENST00000443785 SVILO95425 2214 aa16.51■□□□□ 0.23
PAXBP1-204ENST00000443785 A0A1W2PPE3 182 aa16.51■□□□□ 0.23
PAXBP1-204ENST00000443785 A6NLC8 198 aa16.51■□□□□ 0.23
PAXBP1-204ENST00000443785 PHF1O43189 567 aaPredicted RBP16.51■□□□□ 0.23
PAXBP1-204ENST00000443785 MBPP02686 304 aaPredicted RBP16.51■□□□□ 0.23
PAXBP1-204ENST00000443785 TMEM217Q8N7C4 229 aa16.51■□□□□ 0.23
PAXBP1-204ENST00000443785 OIT3Q8WWZ8 545 aa16.51■□□□□ 0.23
PAXBP1-204ENST00000443785 EMG1Q92979 244 aaKnown RBP16.51■□□□□ 0.23
PAXBP1-204ENST00000443785 PRRX2Q99811 253 aa16.51■□□□□ 0.23
PAXBP1-204ENST00000443785 NELFAQ9H3P2 528 aa16.51■□□□□ 0.23
PAXBP1-204ENST00000443785 TMEM100Q9NV29 134 aa16.51■□□□□ 0.23
PAXBP1-204ENST00000443785 COL4A2P08572 1712 aa16.51■□□□□ 0.23
PAXBP1-204ENST00000443785 PRR14LQ5THK1 2151 aa16.5■□□□□ 0.23
PAXBP1-204ENST00000443785 IGKV1-12A0A0C4DH73 117 aa16.5■□□□□ 0.23
PAXBP1-204ENST00000443785 TSPAN15O95858 294 aa16.5■□□□□ 0.23
PAXBP1-204ENST00000443785 IGKV1D-12P01611 117 aa16.5■□□□□ 0.23
PAXBP1-204ENST00000443785 HTR5AP47898 357 aa16.5■□□□□ 0.23
PAXBP1-204ENST00000443785 GRB2P62993 217 aaKnown RBP16.5■□□□□ 0.23
PAXBP1-204ENST00000443785 IGSF11Q5DX21 431 aa16.5■□□□□ 0.23
PAXBP1-204ENST00000443785 SHEQ5VZ18 495 aa16.5■□□□□ 0.23
PAXBP1-204ENST00000443785 WDR74Q6RFH5 385 aaPredicted RBP16.5■□□□□ 0.23
PAXBP1-204ENST00000443785 KIRREL1Q96J84 757 aa16.5■□□□□ 0.23
PAXBP1-204ENST00000443785 PAPOLGQ9BWT3 736 aaKnown RBP16.5■□□□□ 0.23
PAXBP1-204ENST00000443785 SPACA1Q9HBV2 294 aa16.5■□□□□ 0.23
PAXBP1-204ENST00000443785 ZFP57Q9NU63 452 aa16.5■□□□□ 0.23
PAXBP1-204ENST00000443785 C1orf123Q9NWV4 160 aa16.5■□□□□ 0.23
PAXBP1-204ENST00000443785 IL36RNQ9UBH0 155 aa16.5■□□□□ 0.23
PAXBP1-204ENST00000443785 FIGNL2A6NMB9 653 aa16.5■□□□□ 0.23
PAXBP1-204ENST00000443785 IFNA21P01568 189 aa16.5■□□□□ 0.23
PAXBP1-204ENST00000443785 CD63P08962 238 aa16.5■□□□□ 0.23
PAXBP1-204ENST00000443785 TBPP20226 339 aa16.5■□□□□ 0.23
PAXBP1-204ENST00000443785 PLA2G5P39877 138 aa16.5■□□□□ 0.23
PAXBP1-204ENST00000443785 NPBWR2P48146 333 aa16.5■□□□□ 0.23
PAXBP1-204ENST00000443785 CAV2P51636 162 aa16.5■□□□□ 0.23
PAXBP1-204ENST00000443785 SLC35A1P78382 337 aa16.5■□□□□ 0.23
PAXBP1-204ENST00000443785 CADM4Q8NFZ8 388 aa16.5■□□□□ 0.23
PAXBP1-204ENST00000443785 OR9K2Q8NGE7 335 aa16.5■□□□□ 0.23
PAXBP1-204ENST00000443785 NANPQ8TBE9 248 aa16.5■□□□□ 0.23
PAXBP1-204ENST00000443785 HS3ST6Q96QI5 342 aa16.5■□□□□ 0.23
PAXBP1-204ENST00000443785 PHF7Q9BWX1 381 aaPredicted RBP16.5■□□□□ 0.23
PAXBP1-204ENST00000443785 ZNF442Q9H7R0 627 aa16.5■□□□□ 0.23
PAXBP1-204ENST00000443785 ANXA10Q9UJ72 324 aa16.5■□□□□ 0.23
PAXBP1-204ENST00000443785 TRBV6-7A0A0A0MS04 114 aa16.49■□□□□ 0.23
PAXBP1-204ENST00000443785 CDRT15L2A8MXV6 281 aa16.49■□□□□ 0.23
PAXBP1-204ENST00000443785 RFPL3SP0C7P2 107 aa16.49■□□□□ 0.23
PAXBP1-204ENST00000443785 ZNF32P17041 273 aa16.49■□□□□ 0.23
PAXBP1-204ENST00000443785 UQCC3Q6UW78 93 aa16.49■□□□□ 0.23
PAXBP1-204ENST00000443785 TMEM182Q6ZP80 229 aaPredicted RBP16.49■□□□□ 0.23
PAXBP1-204ENST00000443785 RABEPKQ7Z6M1 372 aa16.49■□□□□ 0.23
PAXBP1-204ENST00000443785 AQP10Q96PS8 301 aa16.49■□□□□ 0.23
PAXBP1-204ENST00000443785 CHRNA10Q9GZZ6 450 aa16.49■□□□□ 0.23
PAXBP1-204ENST00000443785 NDRG3Q9UGV2 375 aa16.49■□□□□ 0.23
PAXBP1-204ENST00000443785 LAMA5O15230 3695 aa16.49■□□□□ 0.23
PAXBP1-204ENST00000443785 SGCEO43556 437 aa16.49■□□□□ 0.23
PAXBP1-204ENST00000443785 CXCL13O43927 109 aa16.49■□□□□ 0.23
PAXBP1-204ENST00000443785 SCGNO76038 276 aa16.49■□□□□ 0.23
PAXBP1-204ENST00000443785 RGS19P49795 217 aa16.49■□□□□ 0.23
PAXBP1-204ENST00000443785 SUMO3P55854 103 aaPredicted RBP16.49■□□□□ 0.23
PAXBP1-204ENST00000443785 ZNF528Q3MIS6 628 aa16.49■□□□□ 0.23
PAXBP1-204ENST00000443785 NSUN5P2Q63ZY6 315 aa16.49■□□□□ 0.23
PAXBP1-204ENST00000443785 OR14L1PQ8NHC6 308 aa16.49■□□□□ 0.23
PAXBP1-204ENST00000443785 HAS2Q92819 552 aa16.49■□□□□ 0.23
PAXBP1-204ENST00000443785 NABP1Q96AH0 204 aa16.49■□□□□ 0.23
PAXBP1-204ENST00000443785 MOB1AQ9H8S9 216 aa16.49■□□□□ 0.23
PAXBP1-204ENST00000443785 NDUFA2O43678 99 aa16.49■□□□□ 0.23
PAXBP1-204ENST00000443785 ZNF728P0DKX0 622 aa16.49■□□□□ 0.23
PAXBP1-204ENST00000443785 OTX2P32243 289 aa16.49■□□□□ 0.23
PAXBP1-204ENST00000443785 CBX5P45973 191 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms