RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 NDUFS8O00217 210 aa11.39□□□□□ -0.59
TM9SF4-204ENST00000442842 IGKV1D-12P01611 117 aa11.39□□□□□ -0.59
TM9SF4-204ENST00000442842 ROS1P08922 2347 aa11.39□□□□□ -0.59
TM9SF4-204ENST00000442842 PTGFRP43088 359 aa11.39□□□□□ -0.59
TM9SF4-204ENST00000442842 NPBWR2P48146 333 aa11.39□□□□□ -0.59
TM9SF4-204ENST00000442842 RIN1Q13671 783 aa11.39□□□□□ -0.59
TM9SF4-204ENST00000442842 ZMYND11Q15326 602 aa11.39□□□□□ -0.59
TM9SF4-204ENST00000442842 P2RY14Q15391 338 aa11.39□□□□□ -0.59
TM9SF4-204ENST00000442842 RSU1Q15404 277 aa11.39□□□□□ -0.59
TM9SF4-204ENST00000442842 RAB11BQ15907 218 aa11.39□□□□□ -0.59
TM9SF4-204ENST00000442842 SHEQ5VZ18 495 aa11.39□□□□□ -0.59
TM9SF4-204ENST00000442842 GLIPR1L1Q6UWM5 242 aa11.39□□□□□ -0.59
TM9SF4-204ENST00000442842 C1QL2Q7Z5L3 287 aa11.39□□□□□ -0.59
TM9SF4-204ENST00000442842 OR6M1Q8NGM8 313 aa11.39□□□□□ -0.59
TM9SF4-204ENST00000442842 NDNFQ8TB73 568 aa11.39□□□□□ -0.59
TM9SF4-204ENST00000442842 FOXRED1Q96CU9 486 aaPredicted RBP11.39□□□□□ -0.59
TM9SF4-204ENST00000442842 GAL3ST1Q99999 423 aa11.39□□□□□ -0.59
TM9SF4-204ENST00000442842 NRIP2Q9BQI9 281 aa11.39□□□□□ -0.59
TM9SF4-204ENST00000442842 UQCC2Q9BRT2 126 aa11.39□□□□□ -0.59
TM9SF4-204ENST00000442842 METTL9Q9H1A3 318 aa11.39□□□□□ -0.59
TM9SF4-204ENST00000442842 KCNK15Q9H427 330 aa11.39□□□□□ -0.59
TM9SF4-204ENST00000442842 V9GY05 133 aa11.39□□□□□ -0.59
TM9SF4-204ENST00000442842 ABCA12Q86UK0 2595 aa11.39□□□□□ -0.59
TM9SF4-204ENST00000442842 PDZD2O15018 2839 aa11.38□□□□□ -0.59
TM9SF4-204ENST00000442842 F8VVB4 439 aa11.38□□□□□ -0.59
TM9SF4-204ENST00000442842 F8VWA3 439 aa11.38□□□□□ -0.59
TM9SF4-204ENST00000442842 IGHV2-70P01814 119 aa11.38□□□□□ -0.59
TM9SF4-204ENST00000442842 TFF1P04155 84 aa11.38□□□□□ -0.59
TM9SF4-204ENST00000442842 PRKACAP17612 351 aa11.38□□□□□ -0.59
TM9SF4-204ENST00000442842 SERPINA2P20848 420 aa11.38□□□□□ -0.59
TM9SF4-204ENST00000442842 HTR2CP28335 458 aa11.38□□□□□ -0.59
TM9SF4-204ENST00000442842 NR4A2P43354 598 aa11.38□□□□□ -0.59
TM9SF4-204ENST00000442842 CLDN12P56749 244 aa11.38□□□□□ -0.59
TM9SF4-204ENST00000442842 TMEM33P57088 247 aa11.38□□□□□ -0.59
TM9SF4-204ENST00000442842 BLMHQ13867 455 aa11.38□□□□□ -0.59
TM9SF4-204ENST00000442842 CTF1Q16619 201 aa11.38□□□□□ -0.59
TM9SF4-204ENST00000442842 CDH26Q8IXH8 852 aa11.38□□□□□ -0.59
TM9SF4-204ENST00000442842 ZSCAN4Q8NAM6 433 aaPredicted RBP11.38□□□□□ -0.59
TM9SF4-204ENST00000442842 WFDC11Q8NEX6 87 aa11.38□□□□□ -0.59
TM9SF4-204ENST00000442842 NLKQ9UBE8 527 aa11.38□□□□□ -0.59
TM9SF4-204ENST00000442842 IL36RNQ9UBH0 155 aa11.38□□□□□ -0.59
TM9SF4-204ENST00000442842 OR14J1Q9UGF5 321 aa11.38□□□□□ -0.59
TM9SF4-204ENST00000442842 TRAV38-1A0A0B4J264 116 aa11.37□□□□□ -0.59
TM9SF4-204ENST00000442842 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.37□□□□□ -0.59
TM9SF4-204ENST00000442842 LGALS8O00214 317 aa11.37□□□□□ -0.59
TM9SF4-204ENST00000442842 SLC17A2O00624 439 aa11.37□□□□□ -0.59
TM9SF4-204ENST00000442842 CRTAPO75718 401 aaPredicted RBP11.37□□□□□ -0.59
TM9SF4-204ENST00000442842 KDM4BO94953 1096 aa11.37□□□□□ -0.59
TM9SF4-204ENST00000442842 HTR3BO95264 441 aa11.37□□□□□ -0.59
TM9SF4-204ENST00000442842 LHBP01229 141 aa11.37□□□□□ -0.59
TM9SF4-204ENST00000442842 GYPAP02724 150 aa11.37□□□□□ -0.59
TM9SF4-204ENST00000442842 SFTPBP07988 381 aa11.37□□□□□ -0.59
TM9SF4-204ENST00000442842 SLC25A16P16260 332 aa11.37□□□□□ -0.59
TM9SF4-204ENST00000442842 GIFP27352 417 aa11.37□□□□□ -0.59
TM9SF4-204ENST00000442842 MDH2P40926 338 aaKnown RBP11.37□□□□□ -0.59
TM9SF4-204ENST00000442842 CEBPDP49716 269 aaPredicted RBP11.37□□□□□ -0.59
TM9SF4-204ENST00000442842 MICBQ29980 383 aa11.37□□□□□ -0.59
TM9SF4-204ENST00000442842 SMIM21Q3B7S5 101 aa11.37□□□□□ -0.59
TM9SF4-204ENST00000442842 SLC22A6Q4U2R8 563 aa11.37□□□□□ -0.59
TM9SF4-204ENST00000442842 SFXN4Q6P4A7 337 aa11.37□□□□□ -0.59
TM9SF4-204ENST00000442842 FIP1L1Q6UN15 594 aaKnown RBP11.37□□□□□ -0.59
TM9SF4-204ENST00000442842 PRSS57Q6UWY2 283 aa11.37□□□□□ -0.59
TM9SF4-204ENST00000442842 ACP7Q6ZNF0 438 aa11.37□□□□□ -0.59
TM9SF4-204ENST00000442842 DNM1P46Q6ZS02 220 aa11.37□□□□□ -0.59
TM9SF4-204ENST00000442842 TPRA1Q86W33 373 aa11.37□□□□□ -0.59
TM9SF4-204ENST00000442842 NR2C2APQ86WQ0 139 aa11.37□□□□□ -0.59
TM9SF4-204ENST00000442842 LYPD6Q86Y78 171 aa11.37□□□□□ -0.59
TM9SF4-204ENST00000442842 Q8IYB0 196 aa11.37□□□□□ -0.59
TM9SF4-204ENST00000442842 SAXO1Q8IYX7 474 aa11.37□□□□□ -0.59
TM9SF4-204ENST00000442842 PXT1Q8NFP0 134 aa11.37□□□□□ -0.59
TM9SF4-204ENST00000442842 OR5T2Q8NGG2 359 aa11.37□□□□□ -0.59
TM9SF4-204ENST00000442842 RAB2BQ8WUD1 216 aa11.37□□□□□ -0.59
TM9SF4-204ENST00000442842 FAM46BQ96A09 425 aa11.37□□□□□ -0.59
TM9SF4-204ENST00000442842 DAPK2Q9UIK4 370 aa11.37□□□□□ -0.59
TM9SF4-204ENST00000442842 ARFGEF3Q5TH69 2177 aa11.37□□□□□ -0.59
TM9SF4-204ENST00000442842 TANC2Q9HCD6 1990 aa11.36□□□□□ -0.59
TM9SF4-204ENST00000442842 A0A0B4J203 849 aa11.36□□□□□ -0.59
TM9SF4-204ENST00000442842 A0A0G2JK05 382 aa11.36□□□□□ -0.59
TM9SF4-204ENST00000442842 A0A1W2PP11 408 aa11.36□□□□□ -0.59
TM9SF4-204ENST00000442842 NKX6-3A6NJ46 265 aa11.36□□□□□ -0.59
TM9SF4-204ENST00000442842 NOTOA8MTQ0 251 aa11.36□□□□□ -0.59
TM9SF4-204ENST00000442842 RNF223E7ERA6 249 aa11.36□□□□□ -0.59
TM9SF4-204ENST00000442842 SLC22A1O15245 554 aa11.36□□□□□ -0.59
TM9SF4-204ENST00000442842 NOS1APO75052 506 aaPredicted RBP11.36□□□□□ -0.59
TM9SF4-204ENST00000442842 CSTBP04080 98 aaKnown RBP11.36□□□□□ -0.59
TM9SF4-204ENST00000442842 SLC2A2P11168 524 aaPredicted RBP11.36□□□□□ -0.59
TM9SF4-204ENST00000442842 CFHR2P36980 270 aa11.36□□□□□ -0.59
TM9SF4-204ENST00000442842 GABRA2P47869 451 aa11.36□□□□□ -0.59
TM9SF4-204ENST00000442842 PSMD7P51665 324 aa11.36□□□□□ -0.59
TM9SF4-204ENST00000442842 ERVK11-1P61568 191 aa11.36□□□□□ -0.59
TM9SF4-204ENST00000442842 KCNJ8Q15842 424 aa11.36□□□□□ -0.59
TM9SF4-204ENST00000442842 ZNF404Q494X3 552 aa11.36□□□□□ -0.59
TM9SF4-204ENST00000442842 TEX36Q5VZQ5 186 aa11.36□□□□□ -0.59
TM9SF4-204ENST00000442842 USP43Q70EL4 1123 aa11.36□□□□□ -0.59
TM9SF4-204ENST00000442842 FAM90A1Q86YD7 464 aa11.36□□□□□ -0.59
TM9SF4-204ENST00000442842 FAM58AQ8N1B3 248 aa11.36□□□□□ -0.59
TM9SF4-204ENST00000442842 MUC20Q8N307 709 aaPredicted RBP11.36□□□□□ -0.59
TM9SF4-204ENST00000442842 SPICQ8N5J4 248 aa11.36□□□□□ -0.59
TM9SF4-204ENST00000442842 TBC1D15Q8TC07 691 aa11.36□□□□□ -0.59
TM9SF4-204ENST00000442842 ISOC1Q96CN7 298 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms