RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 NOXA1Q86UR1 476 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 TINAGL1Q9GZM7 467 aaPredicted RBP5.18□□□□□ -1.58
VPS50-205ENST00000441602 CXXC4Q9H2H0 198 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 MGAT4CQ9UBM8 478 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 PAIP2BQ9ULR5 123 aaKnown RBP5.18□□□□□ -1.58
VPS50-205ENST00000441602 WASF3Q9UPY6 502 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 C14orf166Q9Y224 244 aaKnown RBP5.18□□□□□ -1.58
VPS50-205ENST00000441602 UNC80Q8N2C7 3258 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 ZNF503-AS2A6NEH8 195 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 MCRIP1C9JLW8 97 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 OR7C1O76099 320 aaPredicted RBP5.18□□□□□ -1.58
VPS50-205ENST00000441602 IGKV3-15P01624 115 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 C1QBP02746 253 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 GLI4P10075 376 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 PGAM2P15259 253 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 IL24Q13007 206 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 CDK10Q15131 360 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 NKPD1Q17RQ9 610 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 NHLRC3Q5JS37 347 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 FAHD2BQ6P2I3 314 aaPredicted RBP5.18□□□□□ -1.58
VPS50-205ENST00000441602 HAGHLQ6PII5 290 aaPredicted RBP5.18□□□□□ -1.58
VPS50-205ENST00000441602 C1QL2Q7Z5L3 287 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 TMED4Q7Z7H5 227 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 ZNF431Q8TF32 576 aaPredicted RBP5.18□□□□□ -1.58
VPS50-205ENST00000441602 ST8SIA4Q92187 359 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 EMG1Q92979 244 aaKnown RBP5.18□□□□□ -1.58
VPS50-205ENST00000441602 FAHD2AQ96GK7 314 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 ST6GAL2Q96JF0 529 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 HYLS1Q96M11 299 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 DMRTB1Q96MA1 342 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 ST6GALNAC5Q9BVH7 336 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 BEX2Q9BXY8 128 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 BEX1Q9HBH7 125 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 C12orf4Q9NQ89 552 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 ZNF629Q9UEG4 869 aaPredicted RBP5.18□□□□□ -1.58
VPS50-205ENST00000441602 PURGQ9UJV8 347 aaKnown RBP5.18□□□□□ -1.58
VPS50-205ENST00000441602 MGAT4AQ9UM21 535 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 RAXQ9Y2V3 346 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 FAM215AQ9Y5M1 114 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 A0A0A6YYD4 124 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 A0A1W2PP11 408 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 A0A1W2PR80 420 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 PYCARD-AS1I3L0S3 204 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 PPP3CBP16298 524 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 CA6P23280 308 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 CHATP28329 748 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 HRH1P35367 487 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 ID4P47928 161 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 TMEM50BP56557 158 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 RAP2BP61225 183 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 SURF2Q15527 256 aaPredicted RBP5.18□□□□□ -1.58
VPS50-205ENST00000441602 ZNF626Q68DY1 528 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 FAAP20Q6NZ36 180 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 C12orf45Q8N5I9 185 aaPredicted RBP5.18□□□□□ -1.58
VPS50-205ENST00000441602 SPICQ8N5J4 248 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 NAXEQ8NCW5 288 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 BHLHE23Q8NDY6 225 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 OR13G1Q8NGZ3 307 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 SLAMF9Q96A28 289 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 ZNF75AQ96N20 296 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 SLX1AQ9BQ83 275 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 OR2J1Q9GZK6 312 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 CLEC4MQ9H2X3 399 aaPredicted RBP5.18□□□□□ -1.58
VPS50-205ENST00000441602 NECAP2Q9NVZ3 263 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 EHFQ9NZC4 300 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 KCNK7Q9Y2U2 307 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 SLC25A15Q9Y619 301 aa5.18□□□□□ -1.58
VPS50-205ENST00000441602 GVINP1Q7Z2Y8 2422 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 A0A0B4J293 547 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 POM121CA8CG34 1229 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 A8MV72 311 aaPredicted RBP5.17□□□□□ -1.58
VPS50-205ENST00000441602 K7EM74 188 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 M0R1B8 84 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 SSX5O60225 188 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 AGFG2O95081 481 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 IGLV1-44P01699 117 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 PMP2P02689 132 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 CTXN2P0C2S0 81 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 CECR9P0C854 216 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 SULT1A3P0DMM9 295 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 SULT1A4P0DMN0 295 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 ANOS1P23352 680 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 PRSS12P56730 875 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 IKZF1Q13422 519 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 ST3GAL2Q16842 350 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 PLAC9Q5JTB6 97 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 SPATA46Q5T0L3 261 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 LPCAT3Q6P1A2 487 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 FAM58AQ8N1B3 248 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 ZBTB8BQ8NAP8 495 aaPredicted RBP5.17□□□□□ -1.58
VPS50-205ENST00000441602 Q8NFD4 153 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 OR8G5Q8NG78 346 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 TERB2Q8NHR7 220 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 ZFAND1Q8TCF1 268 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 RND1Q92730 232 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 CCDC120Q96HB5 630 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 SLC6A7Q99884 636 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 C1QTNF6Q9BXI9 259 aa5.17□□□□□ -1.58
VPS50-205ENST00000441602 RANGRFQ9HD47 186 aaPredicted RBP5.17□□□□□ -1.58
VPS50-205ENST00000441602 FLVCR2Q9UPI3 526 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms