RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 ELL3Q9HB65 397 aaPredicted RBP19.82■□□□□ 0.76
CPNE1-217ENST00000439669 MAB21L2Q9Y586 359 aa19.82■□□□□ 0.76
CPNE1-217ENST00000439669 KPTNQ9Y664 436 aa19.82■□□□□ 0.76
CPNE1-217ENST00000439669 IGKV1-27A0A075B6S5 117 aa19.81■□□□□ 0.76
CPNE1-217ENST00000439669 A0A1W2PQ09 198 aa19.81■□□□□ 0.76
CPNE1-217ENST00000439669 DNAJC9-AS1A6NH13 148 aa19.81■□□□□ 0.76
CPNE1-217ENST00000439669 OCM2P0CE71 109 aa19.81■□□□□ 0.76
CPNE1-217ENST00000439669 OCMP0CE72 109 aaPredicted RBP19.81■□□□□ 0.76
CPNE1-217ENST00000439669 CEBPDP49716 269 aaPredicted RBP19.81■□□□□ 0.76
CPNE1-217ENST00000439669 GBX2P52951 348 aaPredicted RBP19.81■□□□□ 0.76
CPNE1-217ENST00000439669 MRPL28Q13084 256 aaKnown RBP19.81■□□□□ 0.76
CPNE1-217ENST00000439669 OR51A4Q8NGJ6 313 aa19.81■□□□□ 0.76
CPNE1-217ENST00000439669 SDSLQ96GA7 329 aa19.81■□□□□ 0.76
CPNE1-217ENST00000439669 ZNF649Q9BS31 505 aa19.81■□□□□ 0.76
CPNE1-217ENST00000439669 OR14J1Q9UGF5 321 aa19.81■□□□□ 0.76
CPNE1-217ENST00000439669 CENPVL3A0A0U1RRI6 287 aa19.8■□□□□ 0.76
CPNE1-217ENST00000439669 MDFIC2A0A1B0GVS7 189 aa19.8■□□□□ 0.76
CPNE1-217ENST00000439669 SLC1A7O00341 560 aa19.8■□□□□ 0.76
CPNE1-217ENST00000439669 ATF1P18846 271 aa19.8■□□□□ 0.76
CPNE1-217ENST00000439669 PRDX2P32119 198 aa19.8■□□□□ 0.76
CPNE1-217ENST00000439669 BPIFB3P59826 476 aa19.8■□□□□ 0.76
CPNE1-217ENST00000439669 OGFRL1Q5TC84 451 aaPredicted RBP19.8■□□□□ 0.76
CPNE1-217ENST00000439669 VMO1Q7Z5L0 202 aa19.8■□□□□ 0.76
CPNE1-217ENST00000439669 EGFL6Q8IUX8 553 aa19.8■□□□□ 0.76
CPNE1-217ENST00000439669 CD177Q8N6Q3 437 aa19.8■□□□□ 0.76
CPNE1-217ENST00000439669 C8orf46Q8TAG6 207 aa19.8■□□□□ 0.76
CPNE1-217ENST00000439669 GATAD2BQ8WXI9 593 aa19.8■□□□□ 0.76
CPNE1-217ENST00000439669 SLAMF9Q96A28 289 aa19.8■□□□□ 0.76
CPNE1-217ENST00000439669 CEP19Q96LK0 163 aa19.8■□□□□ 0.76
CPNE1-217ENST00000439669 COMMD4Q9H0A8 199 aa19.8■□□□□ 0.76
CPNE1-217ENST00000439669 FGF20Q9NP95 211 aaPredicted RBP19.8■□□□□ 0.76
CPNE1-217ENST00000439669 IRGMA1A4Y4 181 aa19.79■□□□□ 0.76
CPNE1-217ENST00000439669 E9PI62 339 aa19.79■□□□□ 0.76
CPNE1-217ENST00000439669 CASQ2O14958 399 aaPredicted RBP19.79■□□□□ 0.76
CPNE1-217ENST00000439669 INMTO95050 263 aa19.79■□□□□ 0.76
CPNE1-217ENST00000439669 CCDC159P0C7I6 412 aa19.79■□□□□ 0.76
CPNE1-217ENST00000439669 PRKACBP22694 351 aa19.79■□□□□ 0.76
CPNE1-217ENST00000439669 AZGP1P25311 298 aaKnown RBP19.79■□□□□ 0.76
CPNE1-217ENST00000439669 POU3F4P49335 361 aa19.79■□□□□ 0.76
CPNE1-217ENST00000439669 RBP2P50120 134 aa19.79■□□□□ 0.76
CPNE1-217ENST00000439669 ATP1B3P54709 279 aa19.79■□□□□ 0.76
CPNE1-217ENST00000439669 ADARB1P78563 741 aaKnown RBP19.79■□□□□ 0.76
CPNE1-217ENST00000439669 SLC25A26Q70HW3 274 aa19.79■□□□□ 0.76
CPNE1-217ENST00000439669 UTS2BQ765I0 119 aa19.79■□□□□ 0.76
CPNE1-217ENST00000439669 PDZD9Q8IXQ8 264 aa19.79■□□□□ 0.76
CPNE1-217ENST00000439669 KIR3DL3Q8N743 410 aa19.79■□□□□ 0.76
CPNE1-217ENST00000439669 DNAAF1Q8NEP3 725 aa19.79■□□□□ 0.76
CPNE1-217ENST00000439669 ZDHHC16Q969W1 377 aa19.79■□□□□ 0.76
CPNE1-217ENST00000439669 DMRTB1Q96MA1 342 aa19.79■□□□□ 0.76
CPNE1-217ENST00000439669 HES4Q9HCC6 221 aa19.79■□□□□ 0.76
CPNE1-217ENST00000439669 IGHV1-69DA0A0B4J2H0 117 aa19.78■□□□□ 0.76
CPNE1-217ENST00000439669 IGKV1-9A0A0C4DH69 117 aa19.78■□□□□ 0.76
CPNE1-217ENST00000439669 TMEM212A6NML5 194 aa19.78■□□□□ 0.76
CPNE1-217ENST00000439669 KNG1P01042 644 aa19.78■□□□□ 0.76
CPNE1-217ENST00000439669 IGHV1-69P01742 117 aa19.78■□□□□ 0.76
CPNE1-217ENST00000439669 LIMS3P0CW19 117 aa19.78■□□□□ 0.76
CPNE1-217ENST00000439669 LIMS4P0CW20 117 aa19.78■□□□□ 0.76
CPNE1-217ENST00000439669 PRTN3P24158 256 aa19.78■□□□□ 0.76
CPNE1-217ENST00000439669 DCKP27707 260 aa19.78■□□□□ 0.76
CPNE1-217ENST00000439669 MTCP1P56278 107 aa19.78■□□□□ 0.76
CPNE1-217ENST00000439669 ERVK11-1P61568 191 aa19.78■□□□□ 0.76
CPNE1-217ENST00000439669 IL18R1Q13478 541 aa19.78■□□□□ 0.76
CPNE1-217ENST00000439669 DEFB112Q30KQ8 113 aa19.78■□□□□ 0.76
CPNE1-217ENST00000439669 FAM185AQ8N0U4 392 aa19.78■□□□□ 0.76
CPNE1-217ENST00000439669 ZNF561Q8N587 486 aa19.78■□□□□ 0.76
CPNE1-217ENST00000439669 OR5AK2Q8NH90 309 aa19.78■□□□□ 0.76
CPNE1-217ENST00000439669 GCDHQ92947 438 aaPredicted RBP19.78■□□□□ 0.76
CPNE1-217ENST00000439669 JAM3Q9BX67 310 aa19.78■□□□□ 0.76
CPNE1-217ENST00000439669 VCXQ9H320 206 aa19.78■□□□□ 0.76
CPNE1-217ENST00000439669 ZMAT3Q9HA38 289 aaKnown RBP19.78■□□□□ 0.76
CPNE1-217ENST00000439669 SIRT7Q9NRC8 400 aa19.78■□□□□ 0.76
CPNE1-217ENST00000439669 STAB1Q9NY15 2570 aa19.77■□□□□ 0.76
CPNE1-217ENST00000439669 ZFPL1O95159 310 aa19.77■□□□□ 0.76
CPNE1-217ENST00000439669 CAPGP40121 348 aa19.77■□□□□ 0.76
CPNE1-217ENST00000439669 ETV1P50549 477 aa19.77■□□□□ 0.76
CPNE1-217ENST00000439669 GABPB1Q06547 395 aaPredicted RBP19.77■□□□□ 0.76
CPNE1-217ENST00000439669 C12orf54Q6X4T0 127 aa19.77■□□□□ 0.76
CPNE1-217ENST00000439669 LHFPL2Q6ZUX7 228 aa19.77■□□□□ 0.76
CPNE1-217ENST00000439669 OR13C9Q8NGT0 318 aa19.77■□□□□ 0.76
CPNE1-217ENST00000439669 HAVCR2Q8TDQ0 301 aa19.77■□□□□ 0.76
CPNE1-217ENST00000439669 TSEN15Q8WW01 171 aaKnown RBP19.77■□□□□ 0.76
CPNE1-217ENST00000439669 SPSB1Q96BD6 273 aa19.77■□□□□ 0.76
CPNE1-217ENST00000439669 C1orf147Q96MC9 270 aaPredicted RBP19.77■□□□□ 0.76
CPNE1-217ENST00000439669 OPALINQ96PE5 141 aa19.77■□□□□ 0.76
CPNE1-217ENST00000439669 PDCD1LG2Q9BQ51 273 aa19.77■□□□□ 0.76
CPNE1-217ENST00000439669 MTCH1Q9NZJ7 389 aa19.77■□□□□ 0.76
CPNE1-217ENST00000439669 TRBV23-1A0A0A0MS06 115 aa19.76■□□□□ 0.75
CPNE1-217ENST00000439669 TRBV2A0A0J9YWF9 115 aa19.76■□□□□ 0.75
CPNE1-217ENST00000439669 CYB5AP00167 134 aa19.76■□□□□ 0.75
CPNE1-217ENST00000439669 RPSAP08865 295 aaKnown RBP19.76■□□□□ 0.75
CPNE1-217ENST00000439669 MYL12AP19105 171 aa19.76■□□□□ 0.75
CPNE1-217ENST00000439669 TMPRSS11AQ6ZMR5 421 aa19.76■□□□□ 0.75
CPNE1-217ENST00000439669 C8orf59Q8N0T1 100 aaPredicted RBP19.76■□□□□ 0.75
CPNE1-217ENST00000439669 DCLRE1BQ9H816 532 aa19.76■□□□□ 0.75
CPNE1-217ENST00000439669 DHDHQ9UQ10 334 aa19.76■□□□□ 0.75
CPNE1-217ENST00000439669 F8VVB4 439 aa19.75■□□□□ 0.75
CPNE1-217ENST00000439669 F8VWA3 439 aa19.75■□□□□ 0.75
CPNE1-217ENST00000439669 H0YAE9 185 aa19.75■□□□□ 0.75
CPNE1-217ENST00000439669 GTF2A1P52655 376 aaPredicted RBP19.75■□□□□ 0.75
CPNE1-217ENST00000439669 PRB3Q04118 309 aaPredicted RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms