RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 AVPI1Q5T686 147 aa13.4□□□□□ -0.26
APP-208ENST00000439274 HIST2H3PS2Q5TEC6 136 aa13.4□□□□□ -0.26
APP-208ENST00000439274 HIST2H3AQ71DI3 136 aa13.4□□□□□ -0.26
APP-208ENST00000439274 PPP1R3BQ86XI6 285 aa13.4□□□□□ -0.26
APP-208ENST00000439274 SECTM1Q8WVN6 248 aa13.4□□□□□ -0.26
APP-208ENST00000439274 KIRREL1Q96J84 757 aa13.4□□□□□ -0.26
APP-208ENST00000439274 ULBP2Q9BZM5 246 aa13.4□□□□□ -0.26
APP-208ENST00000439274 WNT16Q9UBV4 365 aa13.4□□□□□ -0.26
APP-208ENST00000439274 NXT1Q9UKK6 140 aaKnown RBP13.4□□□□□ -0.26
APP-208ENST00000439274 FREM2Q5SZK8 3169 aa13.39□□□□□ -0.27
APP-208ENST00000439274 TNFSF11O14788 317 aa13.39□□□□□ -0.27
APP-208ENST00000439274 XRCC2O43543 280 aa13.39□□□□□ -0.27
APP-208ENST00000439274 DIRAS3O95661 229 aa13.39□□□□□ -0.27
APP-208ENST00000439274 IFNA21P01568 189 aa13.39□□□□□ -0.27
APP-208ENST00000439274 OR5AC1P0C628 307 aa13.39□□□□□ -0.27
APP-208ENST00000439274 PATE4P0C8F1 98 aa13.39□□□□□ -0.27
APP-208ENST00000439274 EIF3IQ13347 325 aaKnown RBP13.39□□□□□ -0.27
APP-208ENST00000439274 RSU1Q15404 277 aa13.39□□□□□ -0.27
APP-208ENST00000439274 FAM76BQ5HYJ3 339 aa13.39□□□□□ -0.27
APP-208ENST00000439274 ZIC4Q8N9L1 334 aa13.39□□□□□ -0.27
APP-208ENST00000439274 PARP11Q9NR21 331 aa13.39□□□□□ -0.27
APP-208ENST00000439274 MBPP02686 304 aaPredicted RBP13.39□□□□□ -0.27
APP-208ENST00000439274 PDCD1Q15116 288 aa13.39□□□□□ -0.27
APP-208ENST00000439274 PEA15Q15121 130 aa13.39□□□□□ -0.27
APP-208ENST00000439274 PHLDA2Q53GA4 152 aa13.39□□□□□ -0.27
APP-208ENST00000439274 MRPL14Q6P1L8 145 aaKnown RBP13.39□□□□□ -0.27
APP-208ENST00000439274 FOXL2NBQ6ZUU3 175 aa13.39□□□□□ -0.27
APP-208ENST00000439274 DEFB123Q8N688 67 aa13.39□□□□□ -0.27
APP-208ENST00000439274 BIN3Q9NQY0 253 aa13.39□□□□□ -0.27
APP-208ENST00000439274 COLCA2A8K830 154 aa13.38□□□□□ -0.27
APP-208ENST00000439274 NME2P1O60361 137 aa13.38□□□□□ -0.27
APP-208ENST00000439274 ZIC3O60481 467 aa13.38□□□□□ -0.27
APP-208ENST00000439274 CA11O75493 328 aa13.38□□□□□ -0.27
APP-208ENST00000439274 JTBO76095 146 aa13.38□□□□□ -0.27
APP-208ENST00000439274 HEXAP06865 529 aa13.38□□□□□ -0.27
APP-208ENST00000439274 NR2C1P13056 603 aa13.38□□□□□ -0.27
APP-208ENST00000439274 PPT1P50897 306 aa13.38□□□□□ -0.27
APP-208ENST00000439274 ZNF133P52736 654 aaPredicted RBP13.38□□□□□ -0.27
APP-208ENST00000439274 ARL6IP1Q15041 203 aa13.38□□□□□ -0.27
APP-208ENST00000439274 PIGYQ3MUY2 71 aa13.38□□□□□ -0.27
APP-208ENST00000439274 ZNF774Q6NX45 483 aa13.38□□□□□ -0.27
APP-208ENST00000439274 LYZL2Q7Z4W2 148 aa13.38□□□□□ -0.27
APP-208ENST00000439274 SPTSSAQ969W0 71 aa13.38□□□□□ -0.27
APP-208ENST00000439274 REEP6Q96HR9 211 aa13.38□□□□□ -0.27
APP-208ENST00000439274 SRXN1Q9BYN0 137 aa13.38□□□□□ -0.27
APP-208ENST00000439274 METTL9Q9H1A3 318 aa13.38□□□□□ -0.27
APP-208ENST00000439274 PROK2Q9HC23 129 aa13.38□□□□□ -0.27
APP-208ENST00000439274 COA4Q9NYJ1 87 aa13.38□□□□□ -0.27
APP-208ENST00000439274 MRPS17Q9Y2R5 130 aaKnown RBP13.38□□□□□ -0.27
APP-208ENST00000439274 FHITP49789 147 aa13.38□□□□□ -0.27
APP-208ENST00000439274 SWI5Q1ZZU3 235 aa13.38□□□□□ -0.27
APP-208ENST00000439274 PLXDC2Q6UX71 529 aa13.38□□□□□ -0.27
APP-208ENST00000439274 CLCC1Q96S66 551 aa13.38□□□□□ -0.27
APP-208ENST00000439274 WFDC1Q9HC57 220 aa13.38□□□□□ -0.27
APP-208ENST00000439274 FOXD3Q9UJU5 478 aaPredicted RBP13.38□□□□□ -0.27
APP-208ENST00000439274 A0A0J9YW62 118 aa13.37□□□□□ -0.27
APP-208ENST00000439274 MED19A0JLT2 244 aaPredicted RBP13.37□□□□□ -0.27
APP-208ENST00000439274 GEMIN2O14893 280 aaKnown RBP13.37□□□□□ -0.27
APP-208ENST00000439274 GAPDHP04406 335 aaKnown RBP13.37□□□□□ -0.27
APP-208ENST00000439274 ZNF728P0DKX0 622 aa13.37□□□□□ -0.27
APP-208ENST00000439274 DVL1P1P54792 670 aaPredicted RBP13.37□□□□□ -0.27
APP-208ENST00000439274 PPA1Q15181 289 aa13.37□□□□□ -0.27
APP-208ENST00000439274 RTL6Q6ICC9 239 aa13.37□□□□□ -0.27
APP-208ENST00000439274 OPN5Q6U736 354 aa13.37□□□□□ -0.27
APP-208ENST00000439274 Q6ZSR3 168 aa13.37□□□□□ -0.27
APP-208ENST00000439274 MAML2Q8IZL2 1156 aaPredicted RBP13.37□□□□□ -0.27
APP-208ENST00000439274 BATF2Q8N1L9 274 aa13.37□□□□□ -0.27
APP-208ENST00000439274 DECR2Q9NUI1 292 aa13.37□□□□□ -0.27
APP-208ENST00000439274 CACFD1Q9UGQ2 172 aa13.37□□□□□ -0.27
APP-208ENST00000439274 DKKL1Q9UK85 242 aa13.37□□□□□ -0.27
APP-208ENST00000439274 C1QL1O75973 258 aa13.37□□□□□ -0.27
APP-208ENST00000439274 LIFP15018 202 aa13.37□□□□□ -0.27
APP-208ENST00000439274 NTF4P34130 210 aa13.37□□□□□ -0.27
APP-208ENST00000439274 ECI1P42126 302 aa13.37□□□□□ -0.27
APP-208ENST00000439274 NOVA1P51513 510 aaKnown RBP13.37□□□□□ -0.27
APP-208ENST00000439274 TMEM187Q14656 261 aa13.37□□□□□ -0.27
APP-208ENST00000439274 ABCA11PQ4W5N1 156 aa13.37□□□□□ -0.27
APP-208ENST00000439274 MIDNQ504T8 468 aa13.37□□□□□ -0.27
APP-208ENST00000439274 DMBX1Q8NFW5 382 aa13.37□□□□□ -0.27
APP-208ENST00000439274 OR5L1Q8NGL2 311 aa13.37□□□□□ -0.27
APP-208ENST00000439274 OR11L1Q8NGX0 322 aa13.37□□□□□ -0.27
APP-208ENST00000439274 RTN4IP1Q8WWV3 396 aaPredicted RBP13.37□□□□□ -0.27
APP-208ENST00000439274 C14orf79Q96F83 325 aa13.37□□□□□ -0.27
APP-208ENST00000439274 NAA60Q9H7X0 242 aa13.37□□□□□ -0.27
APP-208ENST00000439274 NECAP2Q9NVZ3 263 aa13.37□□□□□ -0.27
APP-208ENST00000439274 IGKV1-12A0A0C4DH73 117 aa13.36□□□□□ -0.27
APP-208ENST00000439274 SGCEO43556 437 aa13.36□□□□□ -0.27
APP-208ENST00000439274 IGKV1D-12P01611 117 aa13.36□□□□□ -0.27
APP-208ENST00000439274 CRYGSP22914 178 aa13.36□□□□□ -0.27
APP-208ENST00000439274 FKBP2P26885 142 aaKnown RBP13.36□□□□□ -0.27
APP-208ENST00000439274 EPHA8P29322 1005 aaPredicted RBP13.36□□□□□ -0.27
APP-208ENST00000439274 ZNF616Q08AN1 781 aa13.36□□□□□ -0.27
APP-208ENST00000439274 SLC22A25Q6T423 547 aa13.36□□□□□ -0.27
APP-208ENST00000439274 AKR7LQ8NHP1 331 aa13.36□□□□□ -0.27
APP-208ENST00000439274 SLC39A7Q92504 469 aa13.36□□□□□ -0.27
APP-208ENST00000439274 A0A087WZY1 265 aa13.36□□□□□ -0.27
APP-208ENST00000439274 EIF1BO60739 113 aaKnown RBP13.36□□□□□ -0.27
APP-208ENST00000439274 LCATP04180 440 aa13.36□□□□□ -0.27
APP-208ENST00000439274 CHATP28329 748 aa13.36□□□□□ -0.27
APP-208ENST00000439274 TGIF1Q15583 401 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms