RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 BTBD17A6NE02 478 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 SIGLEC16A6NMB1 481 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 GOLGA8JA6NMD2 632 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 IQCF5A8MTL0 148 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 E9PLD3 99 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 H3BMH7 237 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 H3BQF6 201 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 GOLGA8MH3BSY2 632 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 LGALS9O00182 355 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 EIF3HO15372 352 aaKnown RBP eCLIP1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 RAD51CO43502 376 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 PSTPIP1O43586 416 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 OR1F1O43749 312 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 LYPLA1O75608 230 aaPredicted RBP1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 ZNF189O75820 626 aaPredicted RBP1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 CDK14O94921 469 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 KLHL2O95198 593 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 CST1P01037 141 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 FGGP02679 453 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 SEMG1P04279 462 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 CALB1P05937 261 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 STAG3L2P0CL84 134 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 COX6A1P12074 109 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 CCL2P13500 99 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 TNNI1P19237 187 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 PGCP20142 388 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 UQCRC2P22695 453 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 NTSP30990 170 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 S100A5P33763 92 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 PCK1P35558 622 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 FDFT1P37268 417 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 COILP38432 576 aaPredicted RBP1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 HTR2BP41595 481 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 MAGEA6P43360 314 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 MAGEA8P43361 318 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 GPR4P46093 362 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 KCNJ3P48549 501 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 ACOT2P49753 483 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 EFNB2P52799 333 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 PLK1P53350 603 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 RGS8P57771 180 aaPredicted RBP1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 CHRNB3Q05901 458 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 C2orf54Q08AI8 447 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 INCA1Q0VD86 236 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 PJVKQ0ZLH3 352 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 XRCC4Q13426 336 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 GRB7Q14451 532 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 KCNJ11Q14654 390 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 VAMP3Q15836 100 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 UAP1Q16222 522 aaPredicted RBP1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 SYPL1Q16563 259 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 DEFB112Q30KQ8 113 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 KRTAP19-6Q3LI70 58 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 SFT2D3Q587I9 215 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 PVRIGQ6DKI7 326 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 FAM71F2Q6NXP2 309 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 H3F3CQ6NXT2 135 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 PNCKQ6P2M8 343 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 RNASEKQ6P5S7 137 aaKnown RBP1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 C4orf22Q6V702 233 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 STAC2Q6ZMT1 411 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 CYS1Q717R9 158 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 ZNF767PQ75MW2 155 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 TRMT10CQ7L0Y3 403 aaKnown RBP1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 DPY19L4Q7Z388 723 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 UNC93AQ86WB7 457 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 PPP1R27Q86WC6 154 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 ZBTB8OSQ8IWT0 167 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 MICU2Q8IYU8 434 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 FAM9CQ8IZT9 166 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 TMEM86BQ8N661 226 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 CSNK1A1LQ8N752 337 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 PQLC3Q8N755 202 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 ZFP62Q8NB50 900 aaPredicted RBP1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 TMEM35BQ8NCS4 154 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 OR7G2Q8NG99 324 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 OR5B17Q8NGF7 314 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 CLDND2Q8NHS1 167 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 FAM81AQ8TBF8 368 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 DTX3LQ8TDB6 740 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 CD300LFQ8TDQ1 290 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 ST8SIA1Q92185 356 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 UCN3Q969E3 161 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 POP5Q969H6 163 aaKnown RBP1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 MAGOHBQ96A72 148 aaKnown RBP1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 TLCD1Q96CP7 247 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 TMA16Q96EY4 203 aaKnown RBP1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 SH3YL1Q96HL8 342 aaPredicted RBP1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 TSNARE1Q96NA8 513 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 SERPINB12Q96P63 405 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 PANX1Q96RD7 426 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 FAM107BQ9H098 131 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 PPDPFQ9H3Y8 114 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 TMBIM4Q9HC24 238 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 TREM1Q9NP99 234 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 CHRAC1Q9NRG0 131 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 CISHQ9NSE2 258 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 RBAKQ9NYW8 714 aaPredicted RBP1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 SIGLEC8Q9NYZ4 499 aa1.48□□□□□ -2.17
HMGB1P18-201ENST00000438801 STX18Q9P2W9 335 aaKnown RBP1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms