RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 ADAT3Q96EY9 351 aaPredicted RBP20.42■□□□□ 0.86
RAPGEF1-206ENST00000438647 ZNF649Q9BS31 505 aa20.42■□□□□ 0.86
RAPGEF1-206ENST00000438647 ZMAT3Q9HA38 289 aaKnown RBP20.42■□□□□ 0.86
RAPGEF1-206ENST00000438647 FGF20Q9NP95 211 aaPredicted RBP20.42■□□□□ 0.86
RAPGEF1-206ENST00000438647 ONECUT1Q9UBC0 465 aa20.42■□□□□ 0.86
RAPGEF1-206ENST00000438647 RFPL4AA6NLU0 287 aa20.41■□□□□ 0.86
RAPGEF1-206ENST00000438647 TMEM212A6NML5 194 aa20.41■□□□□ 0.86
RAPGEF1-206ENST00000438647 RFPL4AL1F8VTS6 287 aa20.41■□□□□ 0.86
RAPGEF1-206ENST00000438647 SLC1A7O00341 560 aa20.41■□□□□ 0.86
RAPGEF1-206ENST00000438647 OCM2P0CE71 109 aa20.41■□□□□ 0.86
RAPGEF1-206ENST00000438647 OCMP0CE72 109 aaPredicted RBP20.41■□□□□ 0.86
RAPGEF1-206ENST00000438647 PRKACBP22694 351 aa20.41■□□□□ 0.86
RAPGEF1-206ENST00000438647 RBP2P50120 134 aa20.41■□□□□ 0.86
RAPGEF1-206ENST00000438647 ACTG1P63261 375 aa20.41■□□□□ 0.86
RAPGEF1-206ENST00000438647 ADARB1P78563 741 aaKnown RBP20.41■□□□□ 0.86
RAPGEF1-206ENST00000438647 GABPB1Q06547 395 aaPredicted RBP20.41■□□□□ 0.86
RAPGEF1-206ENST00000438647 KIR3DL3Q8N743 410 aa20.41■□□□□ 0.86
RAPGEF1-206ENST00000438647 OR13C3Q8NGS6 347 aa20.41■□□□□ 0.86
RAPGEF1-206ENST00000438647 CNIH3Q8TBE1 160 aa20.41■□□□□ 0.86
RAPGEF1-206ENST00000438647 GATAD2BQ8WXI9 593 aa20.41■□□□□ 0.86
RAPGEF1-206ENST00000438647 SPSB1Q96BD6 273 aa20.41■□□□□ 0.86
RAPGEF1-206ENST00000438647 COMMD4Q9H0A8 199 aa20.41■□□□□ 0.86
RAPGEF1-206ENST00000438647 DCLRE1BQ9H816 532 aa20.41■□□□□ 0.86
RAPGEF1-206ENST00000438647 HES4Q9HCC6 221 aa20.41■□□□□ 0.86
RAPGEF1-206ENST00000438647 ESM1Q9NQ30 184 aa20.41■□□□□ 0.86
RAPGEF1-206ENST00000438647 MAB21L2Q9Y586 359 aa20.41■□□□□ 0.86
RAPGEF1-206ENST00000438647 HSPE1-MOB4S4R3N1 261 aa20.41■□□□□ 0.86
RAPGEF1-206ENST00000438647 TFF1P04155 84 aa20.4■□□□□ 0.86
RAPGEF1-206ENST00000438647 CAPZA1P52907 286 aa20.4■□□□□ 0.86
RAPGEF1-206ENST00000438647 ATP1B3P54709 279 aa20.4■□□□□ 0.86
RAPGEF1-206ENST00000438647 UBA52P62987 128 aaKnown RBP20.4■□□□□ 0.86
RAPGEF1-206ENST00000438647 BAMBIQ13145 260 aa20.4■□□□□ 0.86
RAPGEF1-206ENST00000438647 BRD3OSQ6XYD6 125 aa20.4■□□□□ 0.86
RAPGEF1-206ENST00000438647 ZNF561Q8N587 486 aa20.4■□□□□ 0.86
RAPGEF1-206ENST00000438647 ZNRF1Q8ND25 227 aa20.4■□□□□ 0.86
RAPGEF1-206ENST00000438647 ZNF48Q96MX3 618 aaPredicted RBP20.4■□□□□ 0.86
RAPGEF1-206ENST00000438647 NEK6Q9HC98 313 aa20.4■□□□□ 0.86
RAPGEF1-206ENST00000438647 TRBV23-1A0A0A0MS06 115 aa20.39■□□□□ 0.85
RAPGEF1-206ENST00000438647 H0YAE9 185 aa20.39■□□□□ 0.85
RAPGEF1-206ENST00000438647 CYB5AP00167 134 aa20.39■□□□□ 0.85
RAPGEF1-206ENST00000438647 KNG1P01042 644 aa20.39■□□□□ 0.85
RAPGEF1-206ENST00000438647 LIMS3P0CW19 117 aa20.39■□□□□ 0.85
RAPGEF1-206ENST00000438647 LIMS4P0CW20 117 aa20.39■□□□□ 0.85
RAPGEF1-206ENST00000438647 ATF1P18846 271 aa20.39■□□□□ 0.85
RAPGEF1-206ENST00000438647 PRDX2P32119 198 aa20.39■□□□□ 0.85
RAPGEF1-206ENST00000438647 CAPGP40121 348 aa20.39■□□□□ 0.85
RAPGEF1-206ENST00000438647 ERVK11-1P61568 191 aa20.39■□□□□ 0.85
RAPGEF1-206ENST00000438647 TMPRSS11AQ6ZMR5 421 aa20.39■□□□□ 0.85
RAPGEF1-206ENST00000438647 LHFPL2Q6ZUX7 228 aa20.39■□□□□ 0.85
RAPGEF1-206ENST00000438647 CEP19Q96LK0 163 aa20.39■□□□□ 0.85
RAPGEF1-206ENST00000438647 IGKV1-27A0A075B6S5 117 aa20.38■□□□□ 0.85
RAPGEF1-206ENST00000438647 CENPVL3A0A0U1RRI6 287 aa20.38■□□□□ 0.85
RAPGEF1-206ENST00000438647 A0A1W2PQ09 198 aa20.38■□□□□ 0.85
RAPGEF1-206ENST00000438647 MYL12AP19105 171 aa20.38■□□□□ 0.85
RAPGEF1-206ENST00000438647 PRTN3P24158 256 aa20.38■□□□□ 0.85
RAPGEF1-206ENST00000438647 AZGP1P25311 298 aaKnown RBP20.38■□□□□ 0.85
RAPGEF1-206ENST00000438647 MTCP1P56278 107 aa20.38■□□□□ 0.85
RAPGEF1-206ENST00000438647 MED21Q13503 144 aa20.38■□□□□ 0.85
RAPGEF1-206ENST00000438647 SLC25A26Q70HW3 274 aa20.38■□□□□ 0.85
RAPGEF1-206ENST00000438647 VMO1Q7Z5L0 202 aa20.38■□□□□ 0.85
RAPGEF1-206ENST00000438647 Q8IYB0 196 aa20.38■□□□□ 0.85
RAPGEF1-206ENST00000438647 C8orf59Q8N0T1 100 aaPredicted RBP20.38■□□□□ 0.85
RAPGEF1-206ENST00000438647 OR51A4Q8NGJ6 313 aa20.38■□□□□ 0.85
RAPGEF1-206ENST00000438647 OR10AC1Q8NH08 325 aa20.38■□□□□ 0.85
RAPGEF1-206ENST00000438647 OR5AK2Q8NH90 309 aa20.38■□□□□ 0.85
RAPGEF1-206ENST00000438647 LHX4Q969G2 390 aa20.38■□□□□ 0.85
RAPGEF1-206ENST00000438647 CAB39Q9Y376 341 aaPredicted RBP20.38■□□□□ 0.85
RAPGEF1-206ENST00000438647 ANK2Q01484 3957 aa20.37■□□□□ 0.85
RAPGEF1-206ENST00000438647 IGKV1-9A0A0C4DH69 117 aa20.37■□□□□ 0.85
RAPGEF1-206ENST00000438647 TRBV2A0A0J9YWF9 115 aa20.37■□□□□ 0.85
RAPGEF1-206ENST00000438647 DNAJC9-AS1A6NH13 148 aa20.37■□□□□ 0.85
RAPGEF1-206ENST00000438647 ZFPL1O95159 310 aa20.37■□□□□ 0.85
RAPGEF1-206ENST00000438647 BLMHQ13867 455 aa20.37■□□□□ 0.85
RAPGEF1-206ENST00000438647 CCDC58Q4VC31 144 aa20.37■□□□□ 0.85
RAPGEF1-206ENST00000438647 C1orf122Q6ZSJ8 110 aa20.37■□□□□ 0.85
RAPGEF1-206ENST00000438647 MKXQ8IYA7 352 aa20.37■□□□□ 0.85
RAPGEF1-206ENST00000438647 BATF2Q8N1L9 274 aa20.37■□□□□ 0.85
RAPGEF1-206ENST00000438647 CD177Q8N6Q3 437 aa20.37■□□□□ 0.85
RAPGEF1-206ENST00000438647 OPALINQ96PE5 141 aa20.37■□□□□ 0.85
RAPGEF1-206ENST00000438647 CHCHD3Q9NX63 227 aaKnown RBP20.37■□□□□ 0.85
RAPGEF1-206ENST00000438647 MTCH1Q9NZJ7 389 aa20.37■□□□□ 0.85
RAPGEF1-206ENST00000438647 OR14J1Q9UGF5 321 aa20.37■□□□□ 0.85
RAPGEF1-206ENST00000438647 DIMT1Q9UNQ2 313 aaKnown RBP20.37■□□□□ 0.85
RAPGEF1-206ENST00000438647 EXOSC1Q9Y3B2 195 aaKnown RBP20.37■□□□□ 0.85
RAPGEF1-206ENST00000438647 IGHV1-69DA0A0B4J2H0 117 aa20.36■□□□□ 0.85
RAPGEF1-206ENST00000438647 CLDN34H7C241 214 aa20.36■□□□□ 0.85
RAPGEF1-206ENST00000438647 M0R1W7 72 aa20.36■□□□□ 0.85
RAPGEF1-206ENST00000438647 IGHV1-69P01742 117 aa20.36■□□□□ 0.85
RAPGEF1-206ENST00000438647 MT-ND2P03891 347 aa20.36■□□□□ 0.85
RAPGEF1-206ENST00000438647 METAP1DQ6UB28 335 aaPredicted RBP20.36■□□□□ 0.85
RAPGEF1-206ENST00000438647 FIP1L1Q6UN15 594 aaKnown RBP20.36■□□□□ 0.85
RAPGEF1-206ENST00000438647 GCDHQ92947 438 aaPredicted RBP20.36■□□□□ 0.85
RAPGEF1-206ENST00000438647 ZDHHC16Q969W1 377 aa20.36■□□□□ 0.85
RAPGEF1-206ENST00000438647 SLAMF9Q96A28 289 aa20.36■□□□□ 0.85
RAPGEF1-206ENST00000438647 SLC25A28Q96A46 364 aa20.36■□□□□ 0.85
RAPGEF1-206ENST00000438647 PDCD1LG2Q9BQ51 273 aa20.36■□□□□ 0.85
RAPGEF1-206ENST00000438647 DHDHQ9UQ10 334 aa20.36■□□□□ 0.85
RAPGEF1-206ENST00000438647 E9PI62 339 aa20.35■□□□□ 0.85
RAPGEF1-206ENST00000438647 POU3F4P49335 361 aa20.35■□□□□ 0.85
RAPGEF1-206ENST00000438647 ETV1P50549 477 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms