RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 PTGFRP43088 359 aa13.61□□□□□ -0.23
SCARF1-203ENST00000434376 ID4P47928 161 aa13.61□□□□□ -0.23
SCARF1-203ENST00000434376 ENDOGQ14249 297 aaKnown RBP13.61□□□□□ -0.23
SCARF1-203ENST00000434376 PRR18Q8N4B5 295 aa13.61□□□□□ -0.23
SCARF1-203ENST00000434376 RSRP1Q9BUV0 290 aa13.61□□□□□ -0.23
SCARF1-203ENST00000434376 MRI1Q9BV20 369 aa13.61□□□□□ -0.23
SCARF1-203ENST00000434376 RPS10P5Q9NQ39 176 aa13.61□□□□□ -0.23
SCARF1-203ENST00000434376 IGKV1D-8A0A087WSZ0 117 aa13.61□□□□□ -0.23
SCARF1-203ENST00000434376 ZNF850A8MQ14 1090 aa13.61□□□□□ -0.23
SCARF1-203ENST00000434376 SSX5O60225 188 aa13.61□□□□□ -0.23
SCARF1-203ENST00000434376 DAOP14920 347 aa13.61□□□□□ -0.23
SCARF1-203ENST00000434376 CD80P33681 288 aa13.61□□□□□ -0.23
SCARF1-203ENST00000434376 CHRFAM7AQ494W8 412 aa13.61□□□□□ -0.23
SCARF1-203ENST00000434376 PHLDA2Q53GA4 152 aa13.61□□□□□ -0.23
SCARF1-203ENST00000434376 ZIC4Q8N9L1 334 aa13.61□□□□□ -0.23
SCARF1-203ENST00000434376 SLC25A43Q8WUT9 341 aaPredicted RBP13.61□□□□□ -0.23
SCARF1-203ENST00000434376 ISOC2Q96AB3 205 aa13.61□□□□□ -0.23
SCARF1-203ENST00000434376 REEP6Q96HR9 211 aa13.61□□□□□ -0.23
SCARF1-203ENST00000434376 OR10A2Q9H208 303 aa13.61□□□□□ -0.23
SCARF1-203ENST00000434376 BARX1Q9HBU1 254 aaPredicted RBP13.61□□□□□ -0.23
SCARF1-203ENST00000434376 M0R036 132 aa13.6□□□□□ -0.23
SCARF1-203ENST00000434376 TPT1P13693 172 aaKnown RBP13.6□□□□□ -0.23
SCARF1-203ENST00000434376 TSC22D1Q15714 1073 aa13.6□□□□□ -0.23
SCARF1-203ENST00000434376 FAM76BQ5HYJ3 339 aa13.6□□□□□ -0.23
SCARF1-203ENST00000434376 FAM166AQ6J272 317 aa13.6□□□□□ -0.23
SCARF1-203ENST00000434376 TUSC5Q8IXB3 177 aa13.6□□□□□ -0.23
SCARF1-203ENST00000434376 ZFP57Q9NU63 452 aa13.6□□□□□ -0.23
SCARF1-203ENST00000434376 RELNP78509 3460 aa13.6□□□□□ -0.23
SCARF1-203ENST00000434376 TRAV39A0A0B4J263 110 aa13.6□□□□□ -0.23
SCARF1-203ENST00000434376 MRPL33O75394 65 aaKnown RBP13.6□□□□□ -0.23
SCARF1-203ENST00000434376 IGHMP01871 453 aa13.6□□□□□ -0.23
SCARF1-203ENST00000434376 SNRNP70P08621 437 aaKnown RBP13.6□□□□□ -0.23
SCARF1-203ENST00000434376 MPPED2Q15777 294 aa13.6□□□□□ -0.23
SCARF1-203ENST00000434376 TMEM164Q5U3C3 297 aa13.6□□□□□ -0.23
SCARF1-203ENST00000434376 FDX2Q6P4F2 183 aa13.6□□□□□ -0.23
SCARF1-203ENST00000434376 NKAIN3Q8N8D7 197 aa13.6□□□□□ -0.23
SCARF1-203ENST00000434376 SLC25A21Q9BQT8 299 aaPredicted RBP13.6□□□□□ -0.23
SCARF1-203ENST00000434376 NOSIPQ9Y314 301 aaKnown RBP13.6□□□□□ -0.23
SCARF1-203ENST00000434376 COL12A1Q99715 3063 aa13.59□□□□□ -0.23
SCARF1-203ENST00000434376 TEX13DA0A0J9YY54 714 aaPredicted RBP13.59□□□□□ -0.23
SCARF1-203ENST00000434376 C9orf172C9J069 976 aa13.59□□□□□ -0.23
SCARF1-203ENST00000434376 FABP1P07148 127 aa13.59□□□□□ -0.23
SCARF1-203ENST00000434376 ZFP36L1Q07352 338 aaKnown RBP13.59□□□□□ -0.23
SCARF1-203ENST00000434376 PLCXD3Q63HM9 321 aa13.59□□□□□ -0.23
SCARF1-203ENST00000434376 WDR5BQ86VZ2 330 aa13.59□□□□□ -0.23
SCARF1-203ENST00000434376 SGK3Q96BR1 496 aa13.59□□□□□ -0.23
SCARF1-203ENST00000434376 ZC3H10Q96K80 434 aaKnown RBP13.59□□□□□ -0.23
SCARF1-203ENST00000434376 UTP23Q9BRU9 249 aaKnown RBP13.59□□□□□ -0.23
SCARF1-203ENST00000434376 URM1Q9BTM9 101 aaKnown RBP13.59□□□□□ -0.23
SCARF1-203ENST00000434376 TTLL8A6PVC2 850 aa13.59□□□□□ -0.23
SCARF1-203ENST00000434376 MED6O75586 246 aa13.59□□□□□ -0.23
SCARF1-203ENST00000434376 SELEP16581 610 aa13.59□□□□□ -0.23
SCARF1-203ENST00000434376 ZNF14P17017 642 aaPredicted RBP13.59□□□□□ -0.23
SCARF1-203ENST00000434376 NOVA1P51513 510 aaKnown RBP13.59□□□□□ -0.23
SCARF1-203ENST00000434376 CEBPGP53567 150 aa13.59□□□□□ -0.23
SCARF1-203ENST00000434376 HOXA4Q00056 320 aaPredicted RBP13.59□□□□□ -0.23
SCARF1-203ENST00000434376 BORCS8Q96FH0 119 aa13.59□□□□□ -0.23
SCARF1-203ENST00000434376 STRADBQ9C0K7 418 aa13.59□□□□□ -0.23
SCARF1-203ENST00000434376 PNRC2Q9NPJ4 139 aaKnown RBP13.59□□□□□ -0.23
SCARF1-203ENST00000434376 C5orf49A4QMS7 147 aa13.59□□□□□ -0.23
SCARF1-203ENST00000434376 CPT2P23786 658 aa13.59□□□□□ -0.23
SCARF1-203ENST00000434376 OR2B8PP59922 312 aa13.59□□□□□ -0.23
SCARF1-203ENST00000434376 RAB5BP61020 215 aa13.59□□□□□ -0.23
SCARF1-203ENST00000434376 RAC1P63000 192 aa13.59□□□□□ -0.23
SCARF1-203ENST00000434376 BAP18Q8IXM2 172 aa13.59□□□□□ -0.23
SCARF1-203ENST00000434376 KCNG3Q8TAE7 436 aa13.59□□□□□ -0.23
SCARF1-203ENST00000434376 GLYATL2Q8WU03 294 aa13.59□□□□□ -0.23
SCARF1-203ENST00000434376 FOXB1Q99853 325 aa13.59□□□□□ -0.23
SCARF1-203ENST00000434376 COA4Q9NYJ1 87 aa13.59□□□□□ -0.23
SCARF1-203ENST00000434376 FLVCR1Q9Y5Y0 555 aa13.59□□□□□ -0.23
SCARF1-203ENST00000434376 CPAMD8Q8IZJ3 1885 aa13.59□□□□□ -0.23
SCARF1-203ENST00000434376 A0A1W2PNU3 283 aaPredicted RBP13.58□□□□□ -0.24
SCARF1-203ENST00000434376 NTN3O00634 580 aaPredicted RBP13.58□□□□□ -0.24
SCARF1-203ENST00000434376 RSPO1Q2MKA7 263 aaPredicted RBP13.58□□□□□ -0.24
SCARF1-203ENST00000434376 DOK3Q7L591 496 aa13.58□□□□□ -0.24
SCARF1-203ENST00000434376 MYPOPQ86VE0 399 aaPredicted RBP13.58□□□□□ -0.24
SCARF1-203ENST00000434376 FADS6Q8N9I5 356 aa13.58□□□□□ -0.24
SCARF1-203ENST00000434376 OR5AP2Q8NGF4 316 aa13.58□□□□□ -0.24
SCARF1-203ENST00000434376 SPTSSAQ969W0 71 aa13.58□□□□□ -0.24
SCARF1-203ENST00000434376 ANGPTL4Q9BY76 406 aa13.58□□□□□ -0.24
SCARF1-203ENST00000434376 FAM117AQ9C073 453 aa13.58□□□□□ -0.24
SCARF1-203ENST00000434376 SPENQ96T58 3664 aaKnown RBP13.58□□□□□ -0.24
SCARF1-203ENST00000434376 ASCL1P50553 236 aa13.58□□□□□ -0.24
SCARF1-203ENST00000434376 MCEMP1Q8IX19 187 aa13.58□□□□□ -0.24
SCARF1-203ENST00000434376 SKA3Q8IX90 412 aa13.58□□□□□ -0.24
SCARF1-203ENST00000434376 FBXL14Q8N1E6 418 aa13.58□□□□□ -0.24
SCARF1-203ENST00000434376 ZNF488Q96MN9 340 aa13.58□□□□□ -0.24
SCARF1-203ENST00000434376 ZNF442Q9H7R0 627 aa13.58□□□□□ -0.24
SCARF1-203ENST00000434376 UQCC1Q9NVA1 299 aa13.58□□□□□ -0.24
SCARF1-203ENST00000434376 WISP2O76076 250 aa13.57□□□□□ -0.24
SCARF1-203ENST00000434376 HIST1H1DP16402 221 aaKnown RBP13.57□□□□□ -0.24
SCARF1-203ENST00000434376 PSMB6P28072 239 aa13.57□□□□□ -0.24
SCARF1-203ENST00000434376 LYG2Q86SG7 212 aa13.57□□□□□ -0.24
SCARF1-203ENST00000434376 DTWD2Q8NBA8 298 aa13.57□□□□□ -0.24
SCARF1-203ENST00000434376 OR14K1Q8NGZ2 314 aa13.57□□□□□ -0.24
SCARF1-203ENST00000434376 RNF141Q8WVD5 230 aa13.57□□□□□ -0.24
SCARF1-203ENST00000434376 ZNF700Q9H0M5 742 aa13.57□□□□□ -0.24
SCARF1-203ENST00000434376 SLC7A10Q9NS82 523 aa13.57□□□□□ -0.24
SCARF1-203ENST00000434376 SPAARA0A1B0GVQ0 90 aa13.57□□□□□ -0.24
SCARF1-203ENST00000434376 C9orf170A2RU37 121 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms