RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 VBP1P61758 197 aa12.89□□□□□ -0.35
CNOT9-205ENST00000433439 NCS1P62166 190 aa12.89□□□□□ -0.35
CNOT9-205ENST00000433439 BTG1P62324 171 aa12.89□□□□□ -0.35
CNOT9-205ENST00000433439 RIN1Q13671 783 aa12.89□□□□□ -0.35
CNOT9-205ENST00000433439 AWAT2Q6E213 333 aa12.89□□□□□ -0.35
CNOT9-205ENST00000433439 GDPGP1Q6ZNW5 385 aa12.89□□□□□ -0.35
CNOT9-205ENST00000433439 C1QL2Q7Z5L3 287 aa12.89□□□□□ -0.35
CNOT9-205ENST00000433439 ANKRD13BQ86YJ7 626 aa12.89□□□□□ -0.35
CNOT9-205ENST00000433439 POC1AQ8NBT0 407 aa12.89□□□□□ -0.35
CNOT9-205ENST00000433439 WFDC11Q8NEX6 87 aa12.89□□□□□ -0.35
CNOT9-205ENST00000433439 OR5T2Q8NGG2 359 aa12.89□□□□□ -0.35
CNOT9-205ENST00000433439 CEP19Q96LK0 163 aa12.89□□□□□ -0.35
CNOT9-205ENST00000433439 GFI1Q99684 422 aa12.89□□□□□ -0.35
CNOT9-205ENST00000433439 V9GY05 133 aa12.89□□□□□ -0.35
CNOT9-205ENST00000433439 IGKV1-12A0A0C4DH73 117 aa12.88□□□□□ -0.35
CNOT9-205ENST00000433439 SRRM5B3KS81 715 aa12.88□□□□□ -0.35
CNOT9-205ENST00000433439 F8VVB4 439 aa12.88□□□□□ -0.35
CNOT9-205ENST00000433439 F8VWA3 439 aa12.88□□□□□ -0.35
CNOT9-205ENST00000433439 LGALS8O00214 317 aa12.88□□□□□ -0.35
CNOT9-205ENST00000433439 NDUFS8O00217 210 aa12.88□□□□□ -0.35
CNOT9-205ENST00000433439 NOL3O60936 208 aaKnown RBP12.88□□□□□ -0.35
CNOT9-205ENST00000433439 HTR3BO95264 441 aa12.88□□□□□ -0.35
CNOT9-205ENST00000433439 IGKV1D-12P01611 117 aa12.88□□□□□ -0.35
CNOT9-205ENST00000433439 PGA5P0DJD9 388 aa12.88□□□□□ -0.35
CNOT9-205ENST00000433439 SERPINB10P48595 397 aa12.88□□□□□ -0.35
CNOT9-205ENST00000433439 MTNR1BP49286 362 aa12.88□□□□□ -0.35
CNOT9-205ENST00000433439 CAV3P56539 151 aa12.88□□□□□ -0.35
CNOT9-205ENST00000433439 ZMYND11Q15326 602 aa12.88□□□□□ -0.35
CNOT9-205ENST00000433439 RSU1Q15404 277 aa12.88□□□□□ -0.35
CNOT9-205ENST00000433439 HES5Q5TA89 166 aa12.88□□□□□ -0.35
CNOT9-205ENST00000433439 GLIPR1L1Q6UWM5 242 aa12.88□□□□□ -0.35
CNOT9-205ENST00000433439 PRSS57Q6UWY2 283 aa12.88□□□□□ -0.35
CNOT9-205ENST00000433439 SLC16A12Q6ZSM3 486 aa12.88□□□□□ -0.35
CNOT9-205ENST00000433439 KRTAP1-3Q8IUG1 177 aa12.88□□□□□ -0.35
CNOT9-205ENST00000433439 OR4D6Q8NGJ1 314 aa12.88□□□□□ -0.35
CNOT9-205ENST00000433439 EMG1Q92979 244 aaKnown RBP12.88□□□□□ -0.35
CNOT9-205ENST00000433439 FOXRED1Q96CU9 486 aaPredicted RBP12.88□□□□□ -0.35
CNOT9-205ENST00000433439 GAL3ST1Q99999 423 aa12.88□□□□□ -0.35
CNOT9-205ENST00000433439 RBFOX1Q9NWB1 397 aaKnown RBP12.88□□□□□ -0.35
CNOT9-205ENST00000433439 PRRC2AP48634 2157 aaKnown RBP12.87□□□□□ -0.35
CNOT9-205ENST00000433439 TRAV38-1A0A0B4J264 116 aa12.87□□□□□ -0.35
CNOT9-205ENST00000433439 OOEPA6NGQ2 149 aa12.87□□□□□ -0.35
CNOT9-205ENST00000433439 GABARAPO95166 117 aa12.87□□□□□ -0.35
CNOT9-205ENST00000433439 LHBP01229 141 aa12.87□□□□□ -0.35
CNOT9-205ENST00000433439 GYPAP02724 150 aa12.87□□□□□ -0.35
CNOT9-205ENST00000433439 TFF1P04155 84 aa12.87□□□□□ -0.35
CNOT9-205ENST00000433439 PRKACAP17612 351 aa12.87□□□□□ -0.35
CNOT9-205ENST00000433439 SERPINA2P20848 420 aa12.87□□□□□ -0.35
CNOT9-205ENST00000433439 GIFP27352 417 aa12.87□□□□□ -0.35
CNOT9-205ENST00000433439 CFHR2P36980 270 aa12.87□□□□□ -0.35
CNOT9-205ENST00000433439 NR4A2P43354 598 aa12.87□□□□□ -0.35
CNOT9-205ENST00000433439 CLDN12P56749 244 aa12.87□□□□□ -0.35
CNOT9-205ENST00000433439 P2RY14Q15391 338 aa12.87□□□□□ -0.35
CNOT9-205ENST00000433439 MICBQ29980 383 aa12.87□□□□□ -0.35
CNOT9-205ENST00000433439 SLC22A6Q4U2R8 563 aa12.87□□□□□ -0.35
CNOT9-205ENST00000433439 CDH26Q8IXH8 852 aa12.87□□□□□ -0.35
CNOT9-205ENST00000433439 ZSCAN4Q8NAM6 433 aaPredicted RBP12.87□□□□□ -0.35
CNOT9-205ENST00000433439 NRIP2Q9BQI9 281 aa12.87□□□□□ -0.35
CNOT9-205ENST00000433439 METTL9Q9H1A3 318 aa12.87□□□□□ -0.35
CNOT9-205ENST00000433439 OR14J1Q9UGF5 321 aa12.87□□□□□ -0.35
CNOT9-205ENST00000433439 PCDHB10Q9UN67 800 aa12.87□□□□□ -0.35
CNOT9-205ENST00000433439 RNF223E7ERA6 249 aa12.86□□□□□ -0.35
CNOT9-205ENST00000433439 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.86□□□□□ -0.35
CNOT9-205ENST00000433439 IGHV2-70P01814 119 aa12.86□□□□□ -0.35
CNOT9-205ENST00000433439 CSTBP04080 98 aaKnown RBP12.86□□□□□ -0.35
CNOT9-205ENST00000433439 SFTPBP07988 381 aa12.86□□□□□ -0.35
CNOT9-205ENST00000433439 SLC25A16P16260 332 aa12.86□□□□□ -0.35
CNOT9-205ENST00000433439 HTR2CP28335 458 aa12.86□□□□□ -0.35
CNOT9-205ENST00000433439 MDH2P40926 338 aaKnown RBP12.86□□□□□ -0.35
CNOT9-205ENST00000433439 GABRA2P47869 451 aa12.86□□□□□ -0.35
CNOT9-205ENST00000433439 PSMD7P51665 324 aa12.86□□□□□ -0.35
CNOT9-205ENST00000433439 RAB11BQ15907 218 aa12.86□□□□□ -0.35
CNOT9-205ENST00000433439 SMIM21Q3B7S5 101 aa12.86□□□□□ -0.35
CNOT9-205ENST00000433439 ACP7Q6ZNF0 438 aa12.86□□□□□ -0.35
CNOT9-205ENST00000433439 DNM1P46Q6ZS02 220 aa12.86□□□□□ -0.35
CNOT9-205ENST00000433439 TPRA1Q86W33 373 aa12.86□□□□□ -0.35
CNOT9-205ENST00000433439 SAXO1Q8IYX7 474 aa12.86□□□□□ -0.35
CNOT9-205ENST00000433439 FAM58AQ8N1B3 248 aa12.86□□□□□ -0.35
CNOT9-205ENST00000433439 PXT1Q8NFP0 134 aa12.86□□□□□ -0.35
CNOT9-205ENST00000433439 TMEM246Q9BRR3 403 aa12.86□□□□□ -0.35
CNOT9-205ENST00000433439 UQCC2Q9BRT2 126 aa12.86□□□□□ -0.35
CNOT9-205ENST00000433439 KCNK15Q9H427 330 aa12.86□□□□□ -0.35
CNOT9-205ENST00000433439 TMEM165Q9HC07 324 aa12.86□□□□□ -0.35
CNOT9-205ENST00000433439 NLKQ9UBE8 527 aa12.86□□□□□ -0.35
CNOT9-205ENST00000433439 ITPR2Q14571 2701 aa12.85□□□□□ -0.35
CNOT9-205ENST00000433439 VWC2LB2RUY7 222 aa12.85□□□□□ -0.35
CNOT9-205ENST00000433439 SLC17A2O00624 439 aa12.85□□□□□ -0.35
CNOT9-205ENST00000433439 NOS1APO75052 506 aaPredicted RBP12.85□□□□□ -0.35
CNOT9-205ENST00000433439 KDM4BO94953 1096 aa12.85□□□□□ -0.35
CNOT9-205ENST00000433439 SLC2A2P11168 524 aaPredicted RBP12.85□□□□□ -0.35
CNOT9-205ENST00000433439 DUSP1P28562 367 aa12.85□□□□□ -0.35
CNOT9-205ENST00000433439 CEBPDP49716 269 aaPredicted RBP12.85□□□□□ -0.35
CNOT9-205ENST00000433439 BLMHQ13867 455 aa12.85□□□□□ -0.35
CNOT9-205ENST00000433439 CTF1Q16619 201 aa12.85□□□□□ -0.35
CNOT9-205ENST00000433439 C1orf100Q5SVJ3 147 aa12.85□□□□□ -0.35
CNOT9-205ENST00000433439 NR2C2APQ86WQ0 139 aa12.85□□□□□ -0.35
CNOT9-205ENST00000433439 LRRC28Q86X40 367 aaPredicted RBP12.85□□□□□ -0.35
CNOT9-205ENST00000433439 LYPD6Q86Y78 171 aa12.85□□□□□ -0.35
CNOT9-205ENST00000433439 FAM90A1Q86YD7 464 aa12.85□□□□□ -0.35
CNOT9-205ENST00000433439 Q8IYB0 196 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms