RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 TFDP2Q14188 446 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 ZNF266Q14584 549 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 KRTAP21-3Q3LHN1 58 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 OTOGLQ3ZCN5 2332 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 TFDP3Q5H9I0 405 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 SLC25A25Q6KCM7 469 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 PRMT9Q6P2P2 845 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 BHLHA15Q7RTS1 189 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 NKAIN4Q8IVV8 208 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 RIMKLAQ8IXN7 391 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 PRSS58Q8IYP2 241 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 SNX31Q8N9S9 440 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 GPR26Q8NDV2 337 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 C19orf18Q8NEA5 215 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 OR4K5Q8NGD3 323 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 OR4A15Q8NGL6 344 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 COQ8AQ8NI60 647 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 TCP10LQ8TDR4 215 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 ESR2Q92731 530 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 TFGQ92734 400 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 TCEAL3Q969E4 200 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 HAUS1Q96CS2 278 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 NEURL3Q96EH8 262 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 MSANTD3Q96H12 275 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 ZNF488Q96MN9 340 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 CHRNA10Q9GZZ6 450 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 TOLLIPQ9H0E2 274 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 OR51B5Q9H339 312 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 PLEKHF2Q9H8W4 249 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 TMEM27Q9HBJ8 222 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 YTHDF2Q9Y5A9 579 aaKnown RBP1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 KPTNQ9Y664 436 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 TMEM14AQ9Y6G1 99 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 ZNF462Q96JM2 2506 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 CLUHO75153 1309 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 PHIPQ8WWQ0 1821 aa1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 HELZ2Q9BYK8 2649 aaKnown RBP1.87□□□□□ -2.11
HMGB1P27-201ENST00000431429 SPEGQ15772 3267 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 ZFYVE26Q68DK2 2539 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 TMEM131Q92545 1883 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 SMIM26A0A096LP01 95 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 LOC100653049A0A140TA62 436 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 SYCE1LA8MT33 242 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 HACD1B0YJ81 288 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 ZZEF1O43149 2961 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 SLC19A2O60779 497 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 KRT34O76011 436 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 SLC22A5O76082 557 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 WISP3O95389 354 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 CTDNEP1O95476 244 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 ETHE1O95571 254 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 MBP02144 154 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 APCSP02743 223 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 PRB2P02812 416 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 CD74P04233 296 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 ZNF286BP0CG31 522 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 HLA-EP13747 358 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 CD52P31358 61 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 CDKN2DP55273 166 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 YWHAEP62258 255 aaKnown RBP1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 CDK5Q00535 292 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 KDSRQ06136 332 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 PNOCQ13519 176 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 HTR4Q13639 388 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 OR1Q1Q15612 314 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 STK11Q15831 433 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 RNASE13Q5GAN3 156 aaKnown RBP1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 FAM78AQ5JUQ0 283 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 FBXW9Q5XUX1 488 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 RAB43Q86YS6 212 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 FAM58AQ8N1B3 248 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 OR13C9Q8NGT0 318 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 CIRBP-AS1Q8TBR5 109 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 DNAJB3Q8WWF6 145 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 FLYWCH2Q96CP2 140 aaKnown RBP1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 RCN3Q96D15 328 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 KCNS1Q96KK3 526 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 LINC00167Q96N53 147 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 SCGB3A2Q96PL1 93 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 HSD17B10Q99714 261 aaKnown RBP1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 NDFIP1Q9BT67 221 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 OSBPL11Q9BXB4 747 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 VCXQ9H320 206 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 GAL3ST2Q9H3Q3 398 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 MYOZ1Q9NP98 299 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 C8orf17Q9NRJ1 99 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 ZNF223Q9UK11 482 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 CES1P1Q9UKY3 287 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 DDX19BQ9UMR2 479 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 NDRG2Q9UN36 371 aaKnown RBP1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 SIGLEC9Q9Y336 463 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 RFNGQ9Y644 331 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 FRYQ5TBA9 3013 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 KMT2EQ8IZD2 1858 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 CDK5RAP2Q96SN8 1893 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 SPTA1P02549 2419 aa1.86□□□□□ -2.11
HMGB1P27-201ENST00000431429 SMG1Q96Q15 3661 aaKnown RBP1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 A0A0A6YYD5 115 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 A0A1W2PP18 115 aa1.85□□□□□ -2.11
HMGB1P27-201ENST00000431429 LRCOL1A6NCL2 159 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms