RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 TMEM33P57088 247 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 CTAG1AP78358 180 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 PNLIPRP3Q17RR3 467 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 GLYATL2Q8WU03 294 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 HPSE2Q8WWQ2 592 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 SGK3Q96BR1 496 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 NTNG2Q96CW9 530 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 C2orf50Q96LR7 162 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 CDC6Q99741 560 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 PIGQQ9BRB3 760 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 RSRP1Q9BUV0 290 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 RBM24Q9BX46 236 aaKnown RBP6.24□□□□□ -1.41
COL28A1-202ENST00000430711 SLC7A5P2Q9GIP4 190 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 TAF9BQ9HBM6 251 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 RAB18Q9NP72 206 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 R4GN57 208 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 DIDO1Q9BTC0 2240 aaKnown RBP6.24□□□□□ -1.41
COL28A1-202ENST00000430711 CACNA1HO95180 2353 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 hCG_1809904A0A1W2PP81 198 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 FAM230AA0A1W2PPH8 454 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 A0A1W2PR64 198 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 A0A1W2PRV1 198 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 NPIPB13A6NJU9 1138 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 AQP7P3A6NL99 342 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 NPIPB4C9JG80 1138 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 H7C2Y5 167 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 TNFSF11O14788 317 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 GEMIN2O14893 280 aaKnown RBP6.24□□□□□ -1.41
COL28A1-202ENST00000430711 IGHV3-9P01782 118 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 CD5P06127 495 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 PPP1CCP36873 323 aaKnown RBP6.24□□□□□ -1.41
COL28A1-202ENST00000430711 OR3A2P47893 321 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 CAV2P51636 162 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 SNRPEP62304 92 aaKnown RBP6.24□□□□□ -1.41
COL28A1-202ENST00000430711 NHLH2Q02577 135 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 SLC25A53Q5H9E4 307 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 NSUN5P2Q63ZY6 315 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 ZNF774Q6NX45 483 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 RPUSD3Q6P087 351 aaKnown RBP6.24□□□□□ -1.41
COL28A1-202ENST00000430711 ARRDC1Q8N5I2 433 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 OR5L1Q8NGL2 311 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 OR6X1Q8NH79 312 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 AKR7LQ8NHP1 331 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 EMG1Q92979 244 aaKnown RBP6.24□□□□□ -1.41
COL28A1-202ENST00000430711 MRGPRX4Q96LA9 322 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 JSRP1Q96MG2 331 aaPredicted RBP6.24□□□□□ -1.41
COL28A1-202ENST00000430711 ZNF160Q9HCG1 818 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 SEMA5BQ9P283 1151 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 NDRG3Q9UGV2 375 aa6.24□□□□□ -1.41
COL28A1-202ENST00000430711 ACACBO00763 2458 aa6.23□□□□□ -1.41
COL28A1-202ENST00000430711 A0A0J9YW62 118 aa6.23□□□□□ -1.41
COL28A1-202ENST00000430711 IGHV5-10-1A0A0J9YXX1 117 aa6.23□□□□□ -1.41
COL28A1-202ENST00000430711 A0A1W2PPH5 198 aa6.23□□□□□ -1.41
COL28A1-202ENST00000430711 ARG1P05089 322 aa6.23□□□□□ -1.41
COL28A1-202ENST00000430711 PRF1P14222 555 aa6.23□□□□□ -1.41
COL28A1-202ENST00000430711 RPL12P30050 165 aaKnown RBP6.23□□□□□ -1.41
COL28A1-202ENST00000430711 ZNF84P51523 738 aa6.23□□□□□ -1.41
COL28A1-202ENST00000430711 GPR85P60893 370 aa6.23□□□□□ -1.41
COL28A1-202ENST00000430711 CCL20P78556 96 aa6.23□□□□□ -1.41
COL28A1-202ENST00000430711 H3F3AP84243 136 aa6.23□□□□□ -1.41
COL28A1-202ENST00000430711 MIDNQ504T8 468 aa6.23□□□□□ -1.41
COL28A1-202ENST00000430711 UQCC3Q6UW78 93 aa6.23□□□□□ -1.41
COL28A1-202ENST00000430711 TMEM123Q8N131 208 aa6.23□□□□□ -1.41
COL28A1-202ENST00000430711 DMBX1Q8NFW5 382 aa6.23□□□□□ -1.41
COL28A1-202ENST00000430711 SPACA9Q96E40 222 aaPredicted RBP6.23□□□□□ -1.41
COL28A1-202ENST00000430711 C14orf79Q96F83 325 aa6.23□□□□□ -1.41
COL28A1-202ENST00000430711 Q96M66 194 aa6.23□□□□□ -1.41
COL28A1-202ENST00000430711 ALKBH3Q96Q83 286 aaPredicted RBP6.23□□□□□ -1.41
COL28A1-202ENST00000430711 TGIF2Q9GZN2 237 aa6.23□□□□□ -1.41
COL28A1-202ENST00000430711 FGF23Q9GZV9 251 aaPredicted RBP6.23□□□□□ -1.41
COL28A1-202ENST00000430711 P4HTMQ9NXG6 502 aa6.23□□□□□ -1.41
COL28A1-202ENST00000430711 CACFD1Q9UGQ2 172 aa6.23□□□□□ -1.41
COL28A1-202ENST00000430711 FAM208BQ5VWN6 2430 aa6.23□□□□□ -1.41
COL28A1-202ENST00000430711 ARHGAP21Q5T5U3 1957 aa6.23□□□□□ -1.41
COL28A1-202ENST00000430711 DMXL1Q9Y485 3027 aa6.23□□□□□ -1.41
COL28A1-202ENST00000430711 ZIC3O60481 467 aa6.22□□□□□ -1.41
COL28A1-202ENST00000430711 DEDDO75618 318 aa6.22□□□□□ -1.41
COL28A1-202ENST00000430711 UMODP07911 640 aa6.22□□□□□ -1.41
COL28A1-202ENST00000430711 CHRM2P08172 466 aa6.22□□□□□ -1.41
COL28A1-202ENST00000430711 FBP1P09467 338 aa6.22□□□□□ -1.41
COL28A1-202ENST00000430711 RFPL3SP0C7P2 107 aa6.22□□□□□ -1.41
COL28A1-202ENST00000430711 B4GALT1P15291 398 aa6.22□□□□□ -1.41
COL28A1-202ENST00000430711 ZNF44P15621 663 aa6.22□□□□□ -1.41
COL28A1-202ENST00000430711 EPHA1P21709 976 aa6.22□□□□□ -1.41
COL28A1-202ENST00000430711 NPBWR2P48146 333 aa6.22□□□□□ -1.41
COL28A1-202ENST00000430711 CSNK1A1P48729 337 aa6.22□□□□□ -1.41
COL28A1-202ENST00000430711 PIGPP57054 158 aa6.22□□□□□ -1.41
COL28A1-202ENST00000430711 NAAAQ02083 359 aa6.22□□□□□ -1.41
COL28A1-202ENST00000430711 PCOLCEQ15113 449 aa6.22□□□□□ -1.41
COL28A1-202ENST00000430711 CHRFAM7AQ494W8 412 aa6.22□□□□□ -1.41
COL28A1-202ENST00000430711 CDPF1Q6NVV7 123 aa6.22□□□□□ -1.41
COL28A1-202ENST00000430711 DOK3Q7L591 496 aa6.22□□□□□ -1.41
COL28A1-202ENST00000430711 RAB11FIP2Q7L804 512 aa6.22□□□□□ -1.41
COL28A1-202ENST00000430711 CALHM1Q8IU99 346 aa6.22□□□□□ -1.41
COL28A1-202ENST00000430711 ODF3L1Q8IXM7 274 aa6.22□□□□□ -1.41
COL28A1-202ENST00000430711 FADS6Q8N9I5 356 aa6.22□□□□□ -1.41
COL28A1-202ENST00000430711 SUMF1Q8NBK3 374 aa6.22□□□□□ -1.41
COL28A1-202ENST00000430711 OR6S1Q8NH40 331 aa6.22□□□□□ -1.41
COL28A1-202ENST00000430711 HIST1H2BAQ96A08 127 aa6.22□□□□□ -1.41
COL28A1-202ENST00000430711 CCDC74BQ96LY2 380 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms