RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 GNG3P63215 75 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 RNF151Q2KHN1 245 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 SLC25A26Q70HW3 274 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 ZPLD1Q8TCW7 415 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 TMEM171Q8WVE6 324 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 PTDSS2Q9BVG9 487 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 MYOZ1Q9NP98 299 aaPredicted RBP11.35□□□□□ -0.59
PTCH1-207ENST00000429896 SLC7A10Q9NS82 523 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 ZNF708P17019 499 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 PRDX4Q13162 271 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 LYPD8Q6UX82 237 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 OR13C5Q8NGS8 318 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 ANKRD36A6QL64 1941 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 NOTCH4Q99466 2003 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 CDC14BO60729 498 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 SUCLG1P53597 346 aaKnown RBP11.35□□□□□ -0.59
PTCH1-207ENST00000429896 RBMS2Q15434 407 aaKnown RBP11.35□□□□□ -0.59
PTCH1-207ENST00000429896 ZNF626Q68DY1 528 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 NRARPQ7Z6K4 114 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 ZFP62Q8NB50 900 aaPredicted RBP11.35□□□□□ -0.59
PTCH1-207ENST00000429896 ZDHHC16Q969W1 377 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 ONECUT1Q9UBC0 465 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 PRELID3BQ9Y3B1 194 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 C17orf51A8MQB3 221 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 NEURL1O76050 574 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 SNAPINO95295 136 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 PDGFAP04085 211 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 CSF3P09919 207 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 OR5G3P0C626 314 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 RRASP10301 218 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 SOX18P35713 384 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 RDH5Q92781 318 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 CXXC4Q9H2H0 198 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 KIAA1456Q9P272 454 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 NCBP2LA6PVI3 153 aaKnown RBP11.35□□□□□ -0.59
PTCH1-207ENST00000429896 K7ENP7 123 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 SSSCA1O60232 199 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 UBE2MP61081 183 aaKnown RBP11.35□□□□□ -0.59
PTCH1-207ENST00000429896 PRAMEF5Q5TYX0 476 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 PRAMEF6Q5VXH4 476 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 GLCCI1Q86VQ1 547 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 CCL17Q92583 94 aa11.35□□□□□ -0.59
PTCH1-207ENST00000429896 TSTD3H0UI37 97 aa11.34□□□□□ -0.59
PTCH1-207ENST00000429896 NDUFB3O43676 98 aa11.34□□□□□ -0.59
PTCH1-207ENST00000429896 PRAF2O60831 178 aa11.34□□□□□ -0.59
PTCH1-207ENST00000429896 Q0VFX4 171 aa11.34□□□□□ -0.59
PTCH1-207ENST00000429896 CTF1Q16619 201 aa11.34□□□□□ -0.59
PTCH1-207ENST00000429896 ACTBL2Q562R1 376 aa11.34□□□□□ -0.59
PTCH1-207ENST00000429896 LRRC10Q5BKY1 277 aa11.34□□□□□ -0.59
PTCH1-207ENST00000429896 CDC20BQ86Y33 519 aa11.34□□□□□ -0.59
PTCH1-207ENST00000429896 UBALD1Q8TB05 177 aa11.34□□□□□ -0.59
PTCH1-207ENST00000429896 C20orf85Q9H1P6 137 aa11.34□□□□□ -0.59
PTCH1-207ENST00000429896 A0A0B4J203 849 aa11.34□□□□□ -0.59
PTCH1-207ENST00000429896 SDCBPO00560 298 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-207ENST00000429896 TLE4Q04727 773 aa11.34□□□□□ -0.59
PTCH1-207ENST00000429896 WDR38Q5JTN6 314 aa11.34□□□□□ -0.59
PTCH1-207ENST00000429896 STEAP1BQ6NZ63 245 aa11.34□□□□□ -0.59
PTCH1-207ENST00000429896 ZNF767PQ75MW2 155 aa11.34□□□□□ -0.59
PTCH1-207ENST00000429896 SFT2D1Q8WV19 159 aa11.34□□□□□ -0.59
PTCH1-207ENST00000429896 RIMS4Q9H426 269 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-207ENST00000429896 UGT2A1Q9Y4X1 527 aa11.34□□□□□ -0.59
PTCH1-207ENST00000429896 ARID1BQ8NFD5 2236 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-207ENST00000429896 CDRT15L2A8MXV6 281 aa11.34□□□□□ -0.59
PTCH1-207ENST00000429896 ZIC3O60481 467 aa11.34□□□□□ -0.59
PTCH1-207ENST00000429896 IGF2P01344 180 aa11.34□□□□□ -0.59
PTCH1-207ENST00000429896 CHRM2P08172 466 aa11.34□□□□□ -0.59
PTCH1-207ENST00000429896 RAB13P51153 203 aa11.34□□□□□ -0.59
PTCH1-207ENST00000429896 IAH1Q2TAA2 248 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-207ENST00000429896 VOPP1Q96AW1 172 aa11.34□□□□□ -0.59
PTCH1-207ENST00000429896 FAM96BQ9Y3D0 163 aa11.34□□□□□ -0.59
PTCH1-207ENST00000429896 PI3P19957 117 aa11.34□□□□□ -0.59
PTCH1-207ENST00000429896 FAM122CQ6P4D5 195 aa11.34□□□□□ -0.59
PTCH1-207ENST00000429896 RHOUQ7L0Q8 258 aa11.34□□□□□ -0.59
PTCH1-207ENST00000429896 GPR37O15354 613 aa11.34□□□□□ -0.59
PTCH1-207ENST00000429896 PGA4P0DJD7 388 aa11.34□□□□□ -0.59
PTCH1-207ENST00000429896 PGA3P0DJD8 388 aa11.34□□□□□ -0.59
PTCH1-207ENST00000429896 ASCL1P50553 236 aa11.34□□□□□ -0.59
PTCH1-207ENST00000429896 LSM11P83369 360 aaKnown RBP eCLIP11.34□□□□□ -0.59
PTCH1-207ENST00000429896 PDCD1Q15116 288 aa11.34□□□□□ -0.59
PTCH1-207ENST00000429896 SPSB1Q96BD6 273 aa11.34□□□□□ -0.59
PTCH1-207ENST00000429896 GP6Q9HCN6 339 aa11.34□□□□□ -0.59
PTCH1-207ENST00000429896 RAB5CP51148 216 aa11.33□□□□□ -0.59
PTCH1-207ENST00000429896 HBG1P69891 147 aa11.33□□□□□ -0.59
PTCH1-207ENST00000429896 HBG2P69892 147 aa11.33□□□□□ -0.59
PTCH1-207ENST00000429896 HAGHQ16775 308 aa11.33□□□□□ -0.59
PTCH1-207ENST00000429896 MICBQ29980 383 aa11.33□□□□□ -0.59
PTCH1-207ENST00000429896 SPANXN5Q5MJ07 72 aa11.33□□□□□ -0.59
PTCH1-207ENST00000429896 Q8IYB0 196 aa11.33□□□□□ -0.59
PTCH1-207ENST00000429896 OR1K1Q8NGR3 316 aa11.33□□□□□ -0.59
PTCH1-207ENST00000429896 SLC7A6Q92536 515 aa11.33□□□□□ -0.59
PTCH1-207ENST00000429896 FOXJ3Q9UPW0 622 aa11.33□□□□□ -0.59
PTCH1-207ENST00000429896 CHST2Q9Y4C5 530 aa11.33□□□□□ -0.59
PTCH1-207ENST00000429896 CROCCQ5TZA2 2017 aa11.33□□□□□ -0.6
PTCH1-207ENST00000429896 RPS19P39019 145 aaKnown RBP11.33□□□□□ -0.6
PTCH1-207ENST00000429896 BAMBIQ13145 260 aa11.33□□□□□ -0.6
PTCH1-207ENST00000429896 PRR27Q6MZM9 219 aa11.33□□□□□ -0.6
PTCH1-207ENST00000429896 OR10AD1Q8NGE0 317 aa11.33□□□□□ -0.6
PTCH1-207ENST00000429896 SLC25A46Q96AG3 418 aa11.33□□□□□ -0.6
PTCH1-207ENST00000429896 DEPPQ9NTK1 212 aa11.33□□□□□ -0.6
PTCH1-207ENST00000429896 C2orf16Q68DN1 1984 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms