RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 NUDT22Q9BRQ3 303 aa7.62□□□□□ -1.19
GABPB1-205ENST00000429662 CRB3Q9BUF7 120 aa7.62□□□□□ -1.19
GABPB1-205ENST00000429662 PECRQ9BY49 303 aa7.62□□□□□ -1.19
GABPB1-205ENST00000429662 CHST5Q9GZS9 411 aa7.62□□□□□ -1.19
GABPB1-205ENST00000429662 SLC5A7Q9GZV3 580 aa7.62□□□□□ -1.19
GABPB1-205ENST00000429662 PLEKHA2Q9HB19 425 aa7.62□□□□□ -1.19
GABPB1-205ENST00000429662 DECR2Q9NUI1 292 aa7.62□□□□□ -1.19
GABPB1-205ENST00000429662 EHFQ9NZC4 300 aa7.62□□□□□ -1.19
GABPB1-205ENST00000429662 LPAR3Q9UBY5 353 aa7.62□□□□□ -1.19
GABPB1-205ENST00000429662 ZNF391Q9UJN7 358 aa7.62□□□□□ -1.19
GABPB1-205ENST00000429662 HSF4Q9ULV5 492 aa7.62□□□□□ -1.19
GABPB1-205ENST00000429662 KCNIP3Q9Y2W7 256 aa7.62□□□□□ -1.19
GABPB1-205ENST00000429662 ZNF175Q9Y473 711 aa7.62□□□□□ -1.19
GABPB1-205ENST00000429662 KLF2Q9Y5W3 355 aaPredicted RBP7.62□□□□□ -1.19
GABPB1-205ENST00000429662 FBN3Q75N90 2809 aa7.62□□□□□ -1.19
GABPB1-205ENST00000429662 AKAP9Q99996 3911 aa7.62□□□□□ -1.19
GABPB1-205ENST00000429662 GJE1A6NN92 205 aa7.61□□□□□ -1.19
GABPB1-205ENST00000429662 ZNF705EA8MWA4 302 aaPredicted RBP7.61□□□□□ -1.19
GABPB1-205ENST00000429662 H0YIZ8 118 aa7.61□□□□□ -1.19
GABPB1-205ENST00000429662 RER1O15258 196 aa7.61□□□□□ -1.19
GABPB1-205ENST00000429662 ZNF17P17021 662 aa7.61□□□□□ -1.19
GABPB1-205ENST00000429662 PVALBP20472 110 aaPredicted RBP7.61□□□□□ -1.19
GABPB1-205ENST00000429662 DTYMKP23919 212 aa7.61□□□□□ -1.19
GABPB1-205ENST00000429662 BLVRBP30043 206 aaPredicted RBP7.61□□□□□ -1.19
GABPB1-205ENST00000429662 HOXA1P49639 335 aaPredicted RBP7.61□□□□□ -1.19
GABPB1-205ENST00000429662 SULT1A2P50226 295 aa7.61□□□□□ -1.19
GABPB1-205ENST00000429662 CAV2P51636 162 aa7.61□□□□□ -1.19
GABPB1-205ENST00000429662 SUCLG1P53597 346 aaKnown RBP7.61□□□□□ -1.19
GABPB1-205ENST00000429662 CLDN17P56750 224 aa7.61□□□□□ -1.19
GABPB1-205ENST00000429662 SUPT4H1P63272 117 aaKnown RBP7.61□□□□□ -1.19
GABPB1-205ENST00000429662 RELBQ01201 579 aa7.61□□□□□ -1.19
GABPB1-205ENST00000429662 CNN3Q15417 329 aaKnown RBP7.61□□□□□ -1.19
GABPB1-205ENST00000429662 SLC9A3R2Q15599 337 aa7.61□□□□□ -1.19
GABPB1-205ENST00000429662 HYAL4Q2M3T9 481 aa7.61□□□□□ -1.19
GABPB1-205ENST00000429662 HLA-BQ31612 363 aa7.61□□□□□ -1.19
GABPB1-205ENST00000429662 TMEM176BQ3YBM2 270 aaPredicted RBP7.61□□□□□ -1.19
GABPB1-205ENST00000429662 AADACL3Q5VUY0 350 aa7.61□□□□□ -1.19
GABPB1-205ENST00000429662 C16orf47Q6ZP98 133 aaPredicted RBP7.61□□□□□ -1.19
GABPB1-205ENST00000429662 SHISA6Q6ZSJ9 500 aa7.61□□□□□ -1.19
GABPB1-205ENST00000429662 OR10G3Q8NGC4 313 aa7.61□□□□□ -1.19
GABPB1-205ENST00000429662 FNDC9Q8TBE3 224 aa7.61□□□□□ -1.19
GABPB1-205ENST00000429662 THAP3Q8WTV1 239 aaPredicted RBP7.61□□□□□ -1.19
GABPB1-205ENST00000429662 OR6C1Q96RD1 312 aa7.61□□□□□ -1.19
GABPB1-205ENST00000429662 ST6GALNAC5Q9BVH7 336 aa7.61□□□□□ -1.19
GABPB1-205ENST00000429662 METTL9Q9H1A3 318 aa7.61□□□□□ -1.19
GABPB1-205ENST00000429662 BANF2Q9H503 90 aa7.61□□□□□ -1.19
GABPB1-205ENST00000429662 WDR54Q9H977 334 aa7.61□□□□□ -1.19
GABPB1-205ENST00000429662 TREM1Q9NP99 234 aa7.61□□□□□ -1.19
GABPB1-205ENST00000429662 PARP11Q9NR21 331 aa7.61□□□□□ -1.19
GABPB1-205ENST00000429662 UQCC1Q9NVA1 299 aa7.61□□□□□ -1.19
GABPB1-205ENST00000429662 MLXQ9UH92 298 aa7.61□□□□□ -1.19
GABPB1-205ENST00000429662 TUBD1Q9UJT1 453 aa7.61□□□□□ -1.19
GABPB1-205ENST00000429662 LOC102723996A0A087X1L8 192 aa7.6□□□□□ -1.19
GABPB1-205ENST00000429662 IGKV1-9A0A0C4DH69 117 aa7.6□□□□□ -1.19
GABPB1-205ENST00000429662 FAM74A7A6NL05 159 aa7.6□□□□□ -1.19
GABPB1-205ENST00000429662 NPIPA2E9PIF3 369 aa7.6□□□□□ -1.19
GABPB1-205ENST00000429662 NPIPA3F8WFD2 350 aa7.6□□□□□ -1.19
GABPB1-205ENST00000429662 SMAD9O15198 467 aaKnown RBP7.6□□□□□ -1.19
GABPB1-205ENST00000429662 NUPL2O15504 423 aaKnown RBP7.6□□□□□ -1.19
GABPB1-205ENST00000429662 DHHO43323 396 aa7.6□□□□□ -1.19
GABPB1-205ENST00000429662 RAD51DO75771 328 aa7.6□□□□□ -1.19
GABPB1-205ENST00000429662 OR2J2O76002 312 aa7.6□□□□□ -1.19
GABPB1-205ENST00000429662 RPS2P15880 293 aaKnown RBP7.6□□□□□ -1.19
GABPB1-205ENST00000429662 OTX1P32242 354 aaPredicted RBP7.6□□□□□ -1.19
GABPB1-205ENST00000429662 CDAP32320 146 aa7.6□□□□□ -1.19
GABPB1-205ENST00000429662 PMELP40967 661 aa7.6□□□□□ -1.19
GABPB1-205ENST00000429662 F2RL1P55085 397 aa7.6□□□□□ -1.19
GABPB1-205ENST00000429662 DSCR4P56555 118 aaPredicted RBP7.6□□□□□ -1.19
GABPB1-205ENST00000429662 H3F3AP84243 136 aa7.6□□□□□ -1.19
GABPB1-205ENST00000429662 FAM3AP98173 230 aa7.6□□□□□ -1.19
GABPB1-205ENST00000429662 EXT1Q16394 746 aa7.6□□□□□ -1.19
GABPB1-205ENST00000429662 ANKRD55Q3KP44 614 aa7.6□□□□□ -1.19
GABPB1-205ENST00000429662 FAM74A3Q4VXF1 159 aa7.6□□□□□ -1.19
GABPB1-205ENST00000429662 CARD17Q5XLA6 110 aa7.6□□□□□ -1.19
GABPB1-205ENST00000429662 PLXDC2Q6UX71 529 aa7.6□□□□□ -1.19
GABPB1-205ENST00000429662 PPP1R3BQ86XI6 285 aa7.6□□□□□ -1.19
GABPB1-205ENST00000429662 LDLRAD3Q86YD5 345 aa7.6□□□□□ -1.19
GABPB1-205ENST00000429662 SULF2Q8IWU5 870 aa7.6□□□□□ -1.19
GABPB1-205ENST00000429662 PUSL1Q8N0Z8 303 aaKnown RBP7.6□□□□□ -1.19
GABPB1-205ENST00000429662 SLC38A9Q8NBW4 561 aa7.6□□□□□ -1.19
GABPB1-205ENST00000429662 TMED6Q8WW62 240 aa7.6□□□□□ -1.19
GABPB1-205ENST00000429662 TECTBQ96PL2 329 aa7.6□□□□□ -1.19
GABPB1-205ENST00000429662 RASL10BQ96S79 203 aa7.6□□□□□ -1.19
GABPB1-205ENST00000429662 MICU1Q9BPX6 476 aa7.6□□□□□ -1.19
GABPB1-205ENST00000429662 SF3B5Q9BWJ5 86 aaKnown RBP7.6□□□□□ -1.19
GABPB1-205ENST00000429662 TAF9BQ9HBM6 251 aa7.6□□□□□ -1.19
GABPB1-205ENST00000429662 BIN3Q9NQY0 253 aa7.6□□□□□ -1.19
GABPB1-205ENST00000429662 ZNF319Q9P2F9 582 aa7.6□□□□□ -1.19
GABPB1-205ENST00000429662 CACNA1DQ01668 2161 aa7.6□□□□□ -1.19
GABPB1-205ENST00000429662 BORCS7-ASMTA0A0B4J1R7 106 aa7.59□□□□□ -1.19
GABPB1-205ENST00000429662 A0A1W2PNR3 127 aa7.59□□□□□ -1.19
GABPB1-205ENST00000429662 CRYM-AS1A6NIL9 109 aa7.59□□□□□ -1.19
GABPB1-205ENST00000429662 SHISA8B8ZZ34 492 aa7.59□□□□□ -1.19
GABPB1-205ENST00000429662 STMND1H3BQB6 276 aa7.59□□□□□ -1.19
GABPB1-205ENST00000429662 K7EPK0 472 aa7.59□□□□□ -1.19
GABPB1-205ENST00000429662 ADAP1O75689 374 aa7.59□□□□□ -1.19
GABPB1-205ENST00000429662 SERPINA5P05154 406 aa7.59□□□□□ -1.19
GABPB1-205ENST00000429662 HPNP05981 417 aa7.59□□□□□ -1.19
GABPB1-205ENST00000429662 HKR1P10072 659 aa7.59□□□□□ -1.19
GABPB1-205ENST00000429662 SLC2A1P11166 492 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms