RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 EGR1P18146 543 aa12.49□□□□□ -0.41
GARNL3-204ENST00000429629 PSMB9P28065 219 aa12.49□□□□□ -0.41
GARNL3-204ENST00000429629 FGF9P31371 208 aaPredicted RBP12.49□□□□□ -0.41
GARNL3-204ENST00000429629 PTGFRP43088 359 aa12.49□□□□□ -0.41
GARNL3-204ENST00000429629 GP2P55259 537 aaKnown RBP12.49□□□□□ -0.41
GARNL3-204ENST00000429629 SMIM21Q3B7S5 101 aa12.49□□□□□ -0.41
GARNL3-204ENST00000429629 HSD17B12Q53GQ0 312 aa12.49□□□□□ -0.41
GARNL3-204ENST00000429629 STUMQ69YW2 141 aa12.49□□□□□ -0.41
GARNL3-204ENST00000429629 ELP2Q6IA86 826 aa12.49□□□□□ -0.41
GARNL3-204ENST00000429629 SLC36A1Q7Z2H8 476 aa12.49□□□□□ -0.41
GARNL3-204ENST00000429629 OR52N4Q8NGI2 321 aa12.49□□□□□ -0.41
GARNL3-204ENST00000429629 OR51A2Q8NGJ7 313 aa12.49□□□□□ -0.41
GARNL3-204ENST00000429629 ANGPTL6Q8NI99 470 aa12.49□□□□□ -0.41
GARNL3-204ENST00000429629 TMEM203Q969S6 136 aa12.49□□□□□ -0.41
GARNL3-204ENST00000429629 UQCC2Q9BRT2 126 aa12.49□□□□□ -0.41
GARNL3-204ENST00000429629 SLITRK2Q9H156 845 aa12.49□□□□□ -0.41
GARNL3-204ENST00000429629 TCF7L1Q9HCS4 588 aa12.49□□□□□ -0.41
GARNL3-204ENST00000429629 SNTG1Q9NSN8 517 aa12.49□□□□□ -0.41
GARNL3-204ENST00000429629 NLKQ9UBE8 527 aa12.49□□□□□ -0.41
GARNL3-204ENST00000429629 DNAJB11Q9UBS4 358 aa12.49□□□□□ -0.41
GARNL3-204ENST00000429629 OR2AT4A6NND4 320 aa12.48□□□□□ -0.41
GARNL3-204ENST00000429629 C3orf80F5H4A9 247 aa12.48□□□□□ -0.41
GARNL3-204ENST00000429629 TRAPPC2LH3BP13 241 aa12.48□□□□□ -0.41
GARNL3-204ENST00000429629 GABRPO00591 440 aa12.48□□□□□ -0.41
GARNL3-204ENST00000429629 SMAD7O15105 426 aaKnown RBP12.48□□□□□ -0.41
GARNL3-204ENST00000429629 ZNF780AO75290 641 aaPredicted RBP12.48□□□□□ -0.41
GARNL3-204ENST00000429629 FOXH1O75593 365 aa12.48□□□□□ -0.41
GARNL3-204ENST00000429629 NXPH2O95156 264 aa12.48□□□□□ -0.41
GARNL3-204ENST00000429629 CD80P33681 288 aa12.48□□□□□ -0.41
GARNL3-204ENST00000429629 ZNF93P35789 620 aaPredicted RBP12.48□□□□□ -0.41
GARNL3-204ENST00000429629 PSMD7P51665 324 aa12.48□□□□□ -0.41
GARNL3-204ENST00000429629 RPS25P62851 125 aaKnown RBP12.48□□□□□ -0.41
GARNL3-204ENST00000429629 FABP5Q01469 135 aa12.48□□□□□ -0.41
GARNL3-204ENST00000429629 KRTAP1-1Q07627 177 aa12.48□□□□□ -0.41
GARNL3-204ENST00000429629 SFRP4Q6FHJ7 346 aaPredicted RBP12.48□□□□□ -0.41
GARNL3-204ENST00000429629 ZNF841Q6ZN19 808 aa12.48□□□□□ -0.41
GARNL3-204ENST00000429629 ZNF788Q6ZQV5 615 aa12.48□□□□□ -0.41
GARNL3-204ENST00000429629 BOLLQ8N9W6 283 aaKnown RBP12.48□□□□□ -0.41
GARNL3-204ENST00000429629 DEFB108BQ8NET1 73 aa12.48□□□□□ -0.41
GARNL3-204ENST00000429629 OR8B3Q8NGG8 313 aa12.48□□□□□ -0.41
GARNL3-204ENST00000429629 MSI2Q96DH6 328 aaKnown RBP12.48□□□□□ -0.41
GARNL3-204ENST00000429629 SDSLQ96GA7 329 aa12.48□□□□□ -0.41
GARNL3-204ENST00000429629 OR8B2Q96RD0 313 aa12.48□□□□□ -0.41
GARNL3-204ENST00000429629 WDR13Q9H1Z4 485 aa12.48□□□□□ -0.41
GARNL3-204ENST00000429629 IL36GQ9NZH8 169 aa12.48□□□□□ -0.41
GARNL3-204ENST00000429629 GHRLQ9UBU3 117 aa12.48□□□□□ -0.41
GARNL3-204ENST00000429629 TRAV1-2A0A0B4J238 106 aa12.47□□□□□ -0.41
GARNL3-204ENST00000429629 TRAV20A0A0B4J274 112 aa12.47□□□□□ -0.41
GARNL3-204ENST00000429629 A0A1W2PPK0 400 aa12.47□□□□□ -0.41
GARNL3-204ENST00000429629 ZNF205O95201 554 aa12.47□□□□□ -0.41
GARNL3-204ENST00000429629 ECDO95905 644 aaPredicted RBP12.47□□□□□ -0.41
GARNL3-204ENST00000429629 TMEM225BP0DP42 221 aa12.47□□□□□ -0.41
GARNL3-204ENST00000429629 PSG2P11465 335 aa12.47□□□□□ -0.41
GARNL3-204ENST00000429629 GATA3P23771 443 aa12.47□□□□□ -0.41
GARNL3-204ENST00000429629 IL2RGP31785 369 aa12.47□□□□□ -0.41
GARNL3-204ENST00000429629 DVL1P1P54792 670 aaPredicted RBP12.47□□□□□ -0.41
GARNL3-204ENST00000429629 ZNF146Q15072 292 aa12.47□□□□□ -0.41
GARNL3-204ENST00000429629 ESCO2Q56NI9 601 aa12.47□□□□□ -0.41
GARNL3-204ENST00000429629 DDI2Q5TDH0 399 aa12.47□□□□□ -0.41
GARNL3-204ENST00000429629 FIP1L1Q6UN15 594 aaKnown RBP12.47□□□□□ -0.41
GARNL3-204ENST00000429629 GDPGP1Q6ZNW5 385 aa12.47□□□□□ -0.41
GARNL3-204ENST00000429629 PNLDC1Q8NA58 520 aaKnown RBP12.47□□□□□ -0.41
GARNL3-204ENST00000429629 MAPK1IP1LQ8NDC0 245 aa12.47□□□□□ -0.41
GARNL3-204ENST00000429629 POM121Q96HA1 1249 aa12.47□□□□□ -0.41
GARNL3-204ENST00000429629 PPIL3Q9H2H8 161 aaKnown RBP12.47□□□□□ -0.41
GARNL3-204ENST00000429629 TMEM160Q9NX00 188 aa12.47□□□□□ -0.41
GARNL3-204ENST00000429629 ZNF222Q9UK12 451 aa12.47□□□□□ -0.41
GARNL3-204ENST00000429629 ZNF469Q96JG9 3925 aaPredicted RBP12.47□□□□□ -0.41
GARNL3-204ENST00000429629 IGKV1-12A0A0C4DH73 117 aa12.46□□□□□ -0.41
GARNL3-204ENST00000429629 MAGEA13PA6NCF6 341 aa12.46□□□□□ -0.41
GARNL3-204ENST00000429629 SIGLEC5O15389 551 aa12.46□□□□□ -0.41
GARNL3-204ENST00000429629 IGKV1D-12P01611 117 aa12.46□□□□□ -0.41
GARNL3-204ENST00000429629 GYPAP02724 150 aa12.46□□□□□ -0.41
GARNL3-204ENST00000429629 MSMBP08118 114 aa12.46□□□□□ -0.41
GARNL3-204ENST00000429629 RPS2P15880 293 aaKnown RBP12.46□□□□□ -0.41
GARNL3-204ENST00000429629 AMY2BP19961 511 aa12.46□□□□□ -0.41
GARNL3-204ENST00000429629 PRDX2P32119 198 aa12.46□□□□□ -0.41
GARNL3-204ENST00000429629 PITPNBP48739 271 aa12.46□□□□□ -0.41
GARNL3-204ENST00000429629 MTNR1BP49286 362 aa12.46□□□□□ -0.41
GARNL3-204ENST00000429629 POU3F4P49335 361 aa12.46□□□□□ -0.41
GARNL3-204ENST00000429629 HNRNPA0Q13151 305 aaKnown RBP12.46□□□□□ -0.41
GARNL3-204ENST00000429629 GPR176Q14439 515 aa12.46□□□□□ -0.41
GARNL3-204ENST00000429629 INSL4Q14641 139 aa12.46□□□□□ -0.41
GARNL3-204ENST00000429629 SPIN3Q5JUX0 258 aa12.46□□□□□ -0.41
GARNL3-204ENST00000429629 C1orf100Q5SVJ3 147 aa12.46□□□□□ -0.41
GARNL3-204ENST00000429629 CD276Q5ZPR3 534 aa12.46□□□□□ -0.41
GARNL3-204ENST00000429629 GLT8D1Q68CQ7 371 aa12.46□□□□□ -0.41
GARNL3-204ENST00000429629 LRRTM1Q86UE6 522 aa12.46□□□□□ -0.41
GARNL3-204ENST00000429629 FAM58AQ8N1B3 248 aa12.46□□□□□ -0.41
GARNL3-204ENST00000429629 MRPS24Q96EL2 167 aaKnown RBP12.46□□□□□ -0.41
GARNL3-204ENST00000429629 GPER1Q99527 375 aa12.46□□□□□ -0.41
GARNL3-204ENST00000429629 NARFLQ9H6Q4 476 aa12.46□□□□□ -0.41
GARNL3-204ENST00000429629 SMURF1Q9HCE7 757 aa12.46□□□□□ -0.41
GARNL3-204ENST00000429629 HMG20AQ9NP66 347 aa12.46□□□□□ -0.41
GARNL3-204ENST00000429629 GLS2Q9UI32 602 aa12.46□□□□□ -0.41
GARNL3-204ENST00000429629 STUB1Q9UNE7 303 aa12.46□□□□□ -0.41
GARNL3-204ENST00000429629 ACANP16112 2415 aa12.46□□□□□ -0.42
GARNL3-204ENST00000429629 IGKV1D-17A0A075B6S4 117 aa12.45□□□□□ -0.42
GARNL3-204ENST00000429629 RFPL4AA6NLU0 287 aa12.45□□□□□ -0.42
GARNL3-204ENST00000429629 FAM157AC9JC47 383 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms