RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 CCDC54Q8NEL0 328 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 S100PBPQ96BU1 408 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 ULBP3Q9BZM4 244 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 KIR3DX1Q9H7L2 352 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 SRA1Q9HD15 236 aaKnown RBP4.51□□□□□ -1.69
RIF1-203ENST00000428287 PUS1Q9Y606 427 aaKnown RBP eCLIP4.51□□□□□ -1.69
RIF1-203ENST00000428287 CHD6Q8TD26 2715 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 FAM171A2A8MVW0 826 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 CXCL10P02778 98 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 TAGLN2P37802 199 aaKnown RBP4.51□□□□□ -1.69
RIF1-203ENST00000428287 C1orf140Q5VVS0 124 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 CYP2G1PQ6ZSU1 146 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 KCTD9Q7L273 389 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 C2orf73Q8N5S3 287 aaPredicted RBP4.51□□□□□ -1.69
RIF1-203ENST00000428287 ZNF614Q8N883 585 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 OR14K1Q8NGZ2 314 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 MFSD8Q8NHS3 518 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 FNDC9Q8TBE3 224 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 TVP23CQ96ET8 276 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 HDAC8Q9BY41 377 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 EIF5A2Q9GZV4 153 aaKnown RBP4.51□□□□□ -1.69
RIF1-203ENST00000428287 NELFAQ9H3P2 528 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 EMC9Q9Y3B6 208 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 PTRH2Q9Y3E5 179 aaKnown RBP4.51□□□□□ -1.69
RIF1-203ENST00000428287 IGLON5A6NGN9 336 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 PQBP1O60828 265 aaKnown RBP4.51□□□□□ -1.69
RIF1-203ENST00000428287 CYB5R3P00387 301 aaPredicted RBP4.51□□□□□ -1.69
RIF1-203ENST00000428287 UMODP07911 640 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 ZNF10P21506 573 aaPredicted RBP4.51□□□□□ -1.69
RIF1-203ENST00000428287 ZNF93P35789 620 aaPredicted RBP4.51□□□□□ -1.69
RIF1-203ENST00000428287 POLR2HP52434 150 aaKnown RBP4.51□□□□□ -1.69
RIF1-203ENST00000428287 RBX1P62877 108 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 PTCRAQ6ISU1 281 aaPredicted RBP4.51□□□□□ -1.69
RIF1-203ENST00000428287 JAGN1Q8N5M9 183 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 MBD3L1Q8WWY6 194 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 GAS2L1Q99501 681 aaPredicted RBP4.51□□□□□ -1.69
RIF1-203ENST00000428287 TAS2R4Q9NYW5 299 aa4.51□□□□□ -1.69
RIF1-203ENST00000428287 ANKRD17O75179 2603 aaKnown RBP4.51□□□□□ -1.69
RIF1-203ENST00000428287 SERINC4A6NH21 518 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 BNIP3LO60238 219 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 PIAS2O75928 621 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 CTSDP07339 412 aaPredicted RBP4.5□□□□□ -1.69
RIF1-203ENST00000428287 MMP9P14780 707 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 METAP1P53582 386 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 DPPA3Q6W0C5 159 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 TMEM144Q7Z5S9 345 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 TRAPPC6BQ86SZ2 158 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 Q8NFD4 153 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 AGMATQ9BSE5 352 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 C20orf24Q9BUV8 137 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 SUCNR1Q9BXA5 334 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 TPSD1Q9BZJ3 242 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 S1PR5Q9H228 398 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 PLAGL1Q9UM63 463 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 LOC107986453A0A1B0GWG9 222 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 CDC14CA4D256 554 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 A8MVM7 634 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 DFFBO76075 338 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 TDGF1P3P51864 188 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 NDUFA6P56556 154 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 FAM3BP58499 235 aaPredicted RBP4.5□□□□□ -1.69
RIF1-203ENST00000428287 IGLV3-21P80748 117 aaPredicted RBP4.5□□□□□ -1.69
RIF1-203ENST00000428287 ID3Q02535 119 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 GAB4Q2WGN9 574 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 SUMF2Q8NBJ7 301 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 OR4D5Q8NGN0 318 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 G6PC3Q9BUM1 346 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 OR51B6Q9H340 312 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 GSX1Q9H4S2 264 aaPredicted RBP4.5□□□□□ -1.69
RIF1-203ENST00000428287 SERGEFQ9UGK8 458 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 CCL26Q9Y258 94 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 A6NCN8 305 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 EREGO14944 169 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 NARSO43776 548 aaKnown RBP4.5□□□□□ -1.69
RIF1-203ENST00000428287 ZNF92Q03936 586 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 ENPP2Q13822 863 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 PRSS8Q16651 343 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 TMEM52Q8NDY8 209 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 DTD1Q8TEA8 209 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 ARRDC3Q96B67 414 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 GNPNAT1Q96EK6 184 aaPredicted RBP4.5□□□□□ -1.69
RIF1-203ENST00000428287 ADAT3Q96EY9 351 aaPredicted RBP4.5□□□□□ -1.69
RIF1-203ENST00000428287 P4HTMQ9NXG6 502 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 ZNF727A8MUV8 499 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 B4E171 279 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 MMP23AO75900 390 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 ATP6V0CP27449 155 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 CCKARP32238 428 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 CLDN6P56747 220 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 RPS20P60866 119 aaKnown RBP4.5□□□□□ -1.69
RIF1-203ENST00000428287 OR5AS1Q8N127 324 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 OR2C3Q8N628 320 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 SMAD5Q99717 465 aaKnown RBP4.5□□□□□ -1.69
RIF1-203ENST00000428287 MOB1AQ9H8S9 216 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 RPRMQ9NS64 109 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 RNF150Q9ULK6 438 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 RCL1Q9Y2P8 373 aaKnown RBP4.5□□□□□ -1.69
RIF1-203ENST00000428287 A6NIZ1 184 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 WNT2P09544 360 aa4.5□□□□□ -1.69
RIF1-203ENST00000428287 NPSP0C0P6 89 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms