RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 PDLIM4P50479 330 aa12.97□□□□□ -0.33
COL11A1-204ENST00000427239 CAPZA1P52907 286 aa12.97□□□□□ -0.33
COL11A1-204ENST00000427239 GPR176Q14439 515 aa12.97□□□□□ -0.33
COL11A1-204ENST00000427239 FAM166AQ6J272 317 aa12.97□□□□□ -0.33
COL11A1-204ENST00000427239 PRSS57Q6UWY2 283 aa12.97□□□□□ -0.33
COL11A1-204ENST00000427239 TGIF2LYQ8IUE0 185 aa12.97□□□□□ -0.33
COL11A1-204ENST00000427239 GCSAMQ8N6F7 178 aa12.97□□□□□ -0.33
COL11A1-204ENST00000427239 POC1AQ8NBT0 407 aa12.97□□□□□ -0.33
COL11A1-204ENST00000427239 OR4D6Q8NGJ1 314 aa12.97□□□□□ -0.33
COL11A1-204ENST00000427239 TBC1D15Q8TC07 691 aa12.97□□□□□ -0.33
COL11A1-204ENST00000427239 DGCR14Q96DF8 476 aaKnown RBP12.97□□□□□ -0.33
COL11A1-204ENST00000427239 TIMD4Q96H15 378 aa12.97□□□□□ -0.33
COL11A1-204ENST00000427239 CEP19Q96LK0 163 aa12.97□□□□□ -0.33
COL11A1-204ENST00000427239 NRIP2Q9BQI9 281 aa12.97□□□□□ -0.33
COL11A1-204ENST00000427239 METTL9Q9H1A3 318 aa12.97□□□□□ -0.33
COL11A1-204ENST00000427239 SMURF1Q9HCE7 757 aa12.97□□□□□ -0.33
COL11A1-204ENST00000427239 MRPS28Q9Y2Q9 187 aaKnown RBP12.97□□□□□ -0.33
COL11A1-204ENST00000427239 ARID1AO14497 2285 aa12.97□□□□□ -0.33
COL11A1-204ENST00000427239 VPS13CQ709C8 3753 aa12.97□□□□□ -0.33
COL11A1-204ENST00000427239 NOTCH2Q04721 2471 aa12.97□□□□□ -0.33
COL11A1-204ENST00000427239 CLDN25C9JDP6 229 aa12.96□□□□□ -0.33
COL11A1-204ENST00000427239 H3BMQ9 156 aa12.96□□□□□ -0.33
COL11A1-204ENST00000427239 AIPO00170 330 aa12.96□□□□□ -0.33
COL11A1-204ENST00000427239 AKR7A2O43488 359 aa12.96□□□□□ -0.33
COL11A1-204ENST00000427239 CYB5R3P00387 301 aaPredicted RBP12.96□□□□□ -0.33
COL11A1-204ENST00000427239 GIFP27352 417 aa12.96□□□□□ -0.33
COL11A1-204ENST00000427239 SERPINB10P48595 397 aa12.96□□□□□ -0.33
COL11A1-204ENST00000427239 BMXP51813 675 aa12.96□□□□□ -0.33
COL11A1-204ENST00000427239 OR10A3P58181 314 aa12.96□□□□□ -0.33
COL11A1-204ENST00000427239 ERVK11-1P61568 191 aa12.96□□□□□ -0.33
COL11A1-204ENST00000427239 RSU1Q15404 277 aa12.96□□□□□ -0.33
COL11A1-204ENST00000427239 AWAT2Q6E213 333 aa12.96□□□□□ -0.33
COL11A1-204ENST00000427239 CLEC2AQ6UVW9 174 aa12.96□□□□□ -0.33
COL11A1-204ENST00000427239 C1QL2Q7Z5L3 287 aa12.96□□□□□ -0.33
COL11A1-204ENST00000427239 NR2C2APQ86WQ0 139 aa12.96□□□□□ -0.33
COL11A1-204ENST00000427239 ZNF525Q8N782 197 aa12.96□□□□□ -0.33
COL11A1-204ENST00000427239 RAB1CQ92928 201 aa12.96□□□□□ -0.33
COL11A1-204ENST00000427239 SLAMF9Q96A28 289 aa12.96□□□□□ -0.33
COL11A1-204ENST00000427239 IL36GQ9NZH8 169 aa12.96□□□□□ -0.33
COL11A1-204ENST00000427239 RSL24D1Q9UHA3 163 aaKnown RBP12.96□□□□□ -0.33
COL11A1-204ENST00000427239 STEAP1Q9UHE8 339 aa12.96□□□□□ -0.33
COL11A1-204ENST00000427239 ING4Q9UNL4 249 aa12.96□□□□□ -0.33
COL11A1-204ENST00000427239 SETXQ7Z333 2677 aaKnown RBP12.96□□□□□ -0.34
COL11A1-204ENST00000427239 ANGPTL7O43827 346 aa12.96□□□□□ -0.34
COL11A1-204ENST00000427239 KDM4BO94953 1096 aa12.96□□□□□ -0.34
COL11A1-204ENST00000427239 MUC1P15941 1255 aaPredicted RBP12.96□□□□□ -0.34
COL11A1-204ENST00000427239 GLRA1P23415 457 aa12.96□□□□□ -0.34
COL11A1-204ENST00000427239 RAB11BQ15907 218 aa12.96□□□□□ -0.34
COL11A1-204ENST00000427239 ELP2Q6IA86 826 aa12.96□□□□□ -0.34
COL11A1-204ENST00000427239 SFXN4Q6P4A7 337 aa12.96□□□□□ -0.34
COL11A1-204ENST00000427239 GLIPR1L1Q6UWM5 242 aa12.96□□□□□ -0.34
COL11A1-204ENST00000427239 FAM90A1Q86YD7 464 aa12.96□□□□□ -0.34
COL11A1-204ENST00000427239 Q8NFD4 153 aa12.96□□□□□ -0.34
COL11A1-204ENST00000427239 FAM168AQ92567 244 aa12.96□□□□□ -0.34
COL11A1-204ENST00000427239 SLC25A46Q96AG3 418 aa12.96□□□□□ -0.34
COL11A1-204ENST00000427239 C12orf43Q96C57 262 aaKnown RBP12.96□□□□□ -0.34
COL11A1-204ENST00000427239 DCSTAMPQ9H295 470 aa12.96□□□□□ -0.34
COL11A1-204ENST00000427239 ELL3Q9HB65 397 aaPredicted RBP12.96□□□□□ -0.34
COL11A1-204ENST00000427239 PPIAL4EA0A075B759 164 aa12.95□□□□□ -0.34
COL11A1-204ENST00000427239 IGKV1-12A0A0C4DH73 117 aa12.95□□□□□ -0.34
COL11A1-204ENST00000427239 A0A0G2JK05 382 aa12.95□□□□□ -0.34
COL11A1-204ENST00000427239 PPIAL4DF5H284 164 aa12.95□□□□□ -0.34
COL11A1-204ENST00000427239 PPIHO43447 177 aaKnown RBP12.95□□□□□ -0.34
COL11A1-204ENST00000427239 NXPH2O95156 264 aa12.95□□□□□ -0.34
COL11A1-204ENST00000427239 IGKV1D-12P01611 117 aa12.95□□□□□ -0.34
COL11A1-204ENST00000427239 CSTBP04080 98 aaKnown RBP12.95□□□□□ -0.34
COL11A1-204ENST00000427239 CLEC2LP0C7M8 214 aa12.95□□□□□ -0.34
COL11A1-204ENST00000427239 PPIAL4FP0DN26 164 aa12.95□□□□□ -0.34
COL11A1-204ENST00000427239 ARSBP15848 533 aa12.95□□□□□ -0.34
COL11A1-204ENST00000427239 CARTPTQ16568 116 aa12.95□□□□□ -0.34
COL11A1-204ENST00000427239 MICBQ29980 383 aa12.95□□□□□ -0.34
COL11A1-204ENST00000427239 DNM1P46Q6ZS02 220 aa12.95□□□□□ -0.34
COL11A1-204ENST00000427239 NDNFQ8TB73 568 aa12.95□□□□□ -0.34
COL11A1-204ENST00000427239 SLC25A28Q96A46 364 aa12.95□□□□□ -0.34
COL11A1-204ENST00000427239 NKX3-1Q99801 234 aaPredicted RBP12.95□□□□□ -0.34
COL11A1-204ENST00000427239 FOXC2Q99958 501 aa12.95□□□□□ -0.34
COL11A1-204ENST00000427239 MRI1Q9BV20 369 aa12.95□□□□□ -0.34
COL11A1-204ENST00000427239 OCEL1Q9H607 264 aa12.95□□□□□ -0.34
COL11A1-204ENST00000427239 HES4Q9HCC6 221 aa12.95□□□□□ -0.34
COL11A1-204ENST00000427239 PPIAL4AQ9Y536 164 aa12.95□□□□□ -0.34
COL11A1-204ENST00000427239 DYSFO75923 2080 aa12.95□□□□□ -0.34
COL11A1-204ENST00000427239 TRAV38-1A0A0B4J264 116 aa12.94□□□□□ -0.34
COL11A1-204ENST00000427239 BPNT1O95861 308 aa12.94□□□□□ -0.34
COL11A1-204ENST00000427239 SFTPBP07988 381 aa12.94□□□□□ -0.34
COL11A1-204ENST00000427239 NPBWR2P48146 333 aa12.94□□□□□ -0.34
COL11A1-204ENST00000427239 RORCP51449 518 aa12.94□□□□□ -0.34
COL11A1-204ENST00000427239 BTG1P62324 171 aa12.94□□□□□ -0.34
COL11A1-204ENST00000427239 CHD3Q12873 2000 aaKnown RBP12.94□□□□□ -0.34
COL11A1-204ENST00000427239 SPCS2Q15005 226 aa12.94□□□□□ -0.34
COL11A1-204ENST00000427239 KCNJ8Q15842 424 aa12.94□□□□□ -0.34
COL11A1-204ENST00000427239 DGUOKQ16854 277 aa12.94□□□□□ -0.34
COL11A1-204ENST00000427239 SMIM21Q3B7S5 101 aa12.94□□□□□ -0.34
COL11A1-204ENST00000427239 TEX36Q5VZQ5 186 aa12.94□□□□□ -0.34
COL11A1-204ENST00000427239 FAM58AQ8N1B3 248 aa12.94□□□□□ -0.34
COL11A1-204ENST00000427239 BOLLQ8N9W6 283 aaKnown RBP12.94□□□□□ -0.34
COL11A1-204ENST00000427239 MRPS24Q96EL2 167 aaKnown RBP12.94□□□□□ -0.34
COL11A1-204ENST00000427239 CST11Q9H112 138 aa12.94□□□□□ -0.34
COL11A1-204ENST00000427239 WDR13Q9H1Z4 485 aa12.94□□□□□ -0.34
COL11A1-204ENST00000427239 DCAF16Q9NXF7 216 aa12.94□□□□□ -0.34
COL11A1-204ENST00000427239 DNAJB11Q9UBS4 358 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms