RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 SUPT4H1P63272 117 aaKnown RBP11.39□□□□□ -0.59
COL12A1-205ENST00000425443 TRIM61Q5EBN2 209 aa11.39□□□□□ -0.59
COL12A1-205ENST00000425443 DMRTA1Q5VZB9 504 aa11.39□□□□□ -0.59
COL12A1-205ENST00000425443 ZNF529Q6P280 563 aa11.39□□□□□ -0.59
COL12A1-205ENST00000425443 PGAP1Q75T13 922 aa11.39□□□□□ -0.59
COL12A1-205ENST00000425443 RPS19BP1Q86WX3 136 aaKnown RBP11.39□□□□□ -0.59
COL12A1-205ENST00000425443 OR5AS1Q8N127 324 aa11.39□□□□□ -0.59
COL12A1-205ENST00000425443 OR51F2Q8NH61 342 aa11.39□□□□□ -0.59
COL12A1-205ENST00000425443 PHYHIPLQ96FC7 376 aa11.39□□□□□ -0.59
COL12A1-205ENST00000425443 S100A13Q99584 98 aa11.39□□□□□ -0.59
COL12A1-205ENST00000425443 TMEM59Q9BXS4 323 aa11.39□□□□□ -0.59
COL12A1-205ENST00000425443 GFOD1Q9NXC2 390 aa11.39□□□□□ -0.59
COL12A1-205ENST00000425443 A8MXE2 369 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 F8VVB4 439 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 F8VWA3 439 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 AGPAT2O15120 278 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 HOXB5P09067 269 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 ITGA3P26006 1051 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 FOLR3P41439 243 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 S100A10P60903 97 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 TNFRSF9Q07011 255 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 MST1LQ2TV78 715 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 ANKRD55Q3KP44 614 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 NKAPLQ5M9Q1 402 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 FADS6Q8N9I5 356 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 PNLDC1Q8NA58 520 aaKnown RBP11.38□□□□□ -0.59
COL12A1-205ENST00000425443 SLC39A7Q92504 469 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 PIGTQ969N2 578 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 PRDM6Q9NQX0 595 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 FAM96BQ9Y3D0 163 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 A0A1W2PPE3 182 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 FARS2O95363 451 aaKnown RBP11.38□□□□□ -0.59
COL12A1-205ENST00000425443 H2AFB1P0C5Y9 115 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 FAM157CP0CG43 387 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 GLI4P10075 376 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 DDTP30046 118 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 GRB2P62993 217 aaKnown RBP11.38□□□□□ -0.59
COL12A1-205ENST00000425443 LPAL2Q16609 132 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 DOK3Q7L591 496 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 C1QL2Q7Z5L3 287 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 BATF2Q8N1L9 274 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 OR51T1Q8NGJ9 327 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 OR10C1Q96KK4 312 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 C2orf88Q9BSF0 95 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 NAA11Q9BSU3 229 aaPredicted RBP11.38□□□□□ -0.59
COL12A1-205ENST00000425443 PIGMQ9H3S5 423 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 METTL8Q9H825 291 aaKnown RBP11.38□□□□□ -0.59
COL12A1-205ENST00000425443 STARD10Q9Y365 291 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 GPR179Q6PRD1 2367 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 A0A087WZY1 265 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 ZNF705EA8MWA4 302 aaPredicted RBP11.38□□□□□ -0.59
COL12A1-205ENST00000425443 UMODP07911 640 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 CD79AP11912 226 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 AMY2BP19961 511 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 MSR1P21757 451 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 NFYBP25208 207 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 OR3A2P47893 321 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 RBM39Q14498 530 aaKnown RBP11.38□□□□□ -0.59
COL12A1-205ENST00000425443 CLEC18BQ6UXF7 455 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 GTPBP8Q8N3Z3 284 aaPredicted RBP11.38□□□□□ -0.59
COL12A1-205ENST00000425443 KCNG3Q8TAE7 436 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 UCN2Q96RP3 112 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 SMOC1Q9H4F8 434 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 HS3ST3B1Q9Y662 390 aa11.38□□□□□ -0.59
COL12A1-205ENST00000425443 HSBP1L1C9JCN9 74 aa11.37□□□□□ -0.59
COL12A1-205ENST00000425443 ONECUT2O95948 504 aa11.37□□□□□ -0.59
COL12A1-205ENST00000425443 SFTPBP07988 381 aa11.37□□□□□ -0.59
COL12A1-205ENST00000425443 DBHP09172 617 aa11.37□□□□□ -0.59
COL12A1-205ENST00000425443 FAHP16930 419 aa11.37□□□□□ -0.59
COL12A1-205ENST00000425443 OTX2P32243 289 aa11.37□□□□□ -0.59
COL12A1-205ENST00000425443 NPBWR1P48145 328 aa11.37□□□□□ -0.59
COL12A1-205ENST00000425443 DSCR4P56555 118 aaPredicted RBP11.37□□□□□ -0.59
COL12A1-205ENST00000425443 CSNK2A1P68400 391 aaPredicted RBP11.37□□□□□ -0.59
COL12A1-205ENST00000425443 CRIP3Q6Q6R5 217 aa11.37□□□□□ -0.59
COL12A1-205ENST00000425443 DRAM2Q6UX65 266 aa11.37□□□□□ -0.59
COL12A1-205ENST00000425443 GJC3Q8NFK1 279 aa11.37□□□□□ -0.59
COL12A1-205ENST00000425443 ZNF385AQ96PM9 386 aaKnown RBP11.37□□□□□ -0.59
COL12A1-205ENST00000425443 RTBDNQ9BSG5 229 aaPredicted RBP11.37□□□□□ -0.59
COL12A1-205ENST00000425443 C19orf12Q9NSK7 152 aa11.37□□□□□ -0.59
COL12A1-205ENST00000425443 TNRC18O15417 2968 aaPredicted RBP11.37□□□□□ -0.59
COL12A1-205ENST00000425443 TEX13DA0A0J9YY54 714 aaPredicted RBP11.37□□□□□ -0.59
COL12A1-205ENST00000425443 SLC34A2O95436 690 aa11.37□□□□□ -0.59
COL12A1-205ENST00000425443 CER1O95813 267 aa11.37□□□□□ -0.59
COL12A1-205ENST00000425443 CHRM2P08172 466 aa11.37□□□□□ -0.59
COL12A1-205ENST00000425443 COX6A1P12074 109 aa11.37□□□□□ -0.59
COL12A1-205ENST00000425443 TGIF1Q15583 401 aa11.37□□□□□ -0.59
COL12A1-205ENST00000425443 URM1Q9BTM9 101 aaKnown RBP11.37□□□□□ -0.59
COL12A1-205ENST00000425443 ULBP2Q9BZM5 246 aa11.37□□□□□ -0.59
COL12A1-205ENST00000425443 TMEM100Q9NV29 134 aa11.37□□□□□ -0.59
COL12A1-205ENST00000425443 PLEK2Q9NYT0 353 aa11.37□□□□□ -0.59
COL12A1-205ENST00000425443 OR5H15A6NDH6 313 aa11.36□□□□□ -0.59
COL12A1-205ENST00000425443 C5orf52A6NGY3 159 aa11.36□□□□□ -0.59
COL12A1-205ENST00000425443 TNFSF11O14788 317 aa11.36□□□□□ -0.59
COL12A1-205ENST00000425443 ZNHIT1O43257 154 aa11.36□□□□□ -0.59
COL12A1-205ENST00000425443 CDC14BO60729 498 aa11.36□□□□□ -0.59
COL12A1-205ENST00000425443 SCAF4O95104 1147 aaKnown RBP11.36□□□□□ -0.59
COL12A1-205ENST00000425443 GLRA1P23415 457 aa11.36□□□□□ -0.59
COL12A1-205ENST00000425443 GABRR1P24046 479 aa11.36□□□□□ -0.59
COL12A1-205ENST00000425443 ECH1Q13011 328 aa11.36□□□□□ -0.59
COL12A1-205ENST00000425443 HABP2Q14520 560 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms