RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 SSBP1Q04837 148 aaKnown RBP6.25□□□□□ -1.41
LSM8-204ENST00000424702 TATDN3Q17R31 274 aa6.25□□□□□ -1.41
LSM8-204ENST00000424702 SLC25A26Q70HW3 274 aa6.25□□□□□ -1.41
LSM8-204ENST00000424702 SPICQ8N5J4 248 aa6.25□□□□□ -1.41
LSM8-204ENST00000424702 OR56B4Q8NH76 319 aa6.25□□□□□ -1.41
LSM8-204ENST00000424702 PTX4Q96A99 478 aa6.25□□□□□ -1.41
LSM8-204ENST00000424702 MS4A3Q96HJ5 214 aa6.25□□□□□ -1.41
LSM8-204ENST00000424702 PRRT1Q99946 306 aa6.25□□□□□ -1.41
LSM8-204ENST00000424702 CMSS1Q9BQ75 279 aaKnown RBP6.25□□□□□ -1.41
LSM8-204ENST00000424702 CBLN4Q9NTU7 201 aa6.25□□□□□ -1.41
LSM8-204ENST00000424702 KLK11Q9UBX7 282 aa6.25□□□□□ -1.41
LSM8-204ENST00000424702 ZNF69Q9UC07 566 aa6.25□□□□□ -1.41
LSM8-204ENST00000424702 MGAT4AQ9UM21 535 aa6.25□□□□□ -1.41
LSM8-204ENST00000424702 SPRY1O43609 319 aaPredicted RBP6.25□□□□□ -1.41
LSM8-204ENST00000424702 PTHLHP12272 177 aa6.25□□□□□ -1.41
LSM8-204ENST00000424702 ZNF44P15621 663 aa6.25□□□□□ -1.41
LSM8-204ENST00000424702 HAAOP46952 286 aa6.25□□□□□ -1.41
LSM8-204ENST00000424702 UQCRFS1P47985 274 aa6.25□□□□□ -1.41
LSM8-204ENST00000424702 HIST1H3AP68431 136 aa6.25□□□□□ -1.41
LSM8-204ENST00000424702 SCGB2A2Q13296 93 aa6.25□□□□□ -1.41
LSM8-204ENST00000424702 HIST2H3PS2Q5TEC6 136 aa6.25□□□□□ -1.41
LSM8-204ENST00000424702 HIST2H3AQ71DI3 136 aa6.25□□□□□ -1.41
LSM8-204ENST00000424702 BPIFB2Q8N4F0 458 aa6.25□□□□□ -1.41
LSM8-204ENST00000424702 NUP37Q8NFH4 326 aa6.25□□□□□ -1.41
LSM8-204ENST00000424702 EMG1Q92979 244 aaKnown RBP6.25□□□□□ -1.41
LSM8-204ENST00000424702 YIPF5Q969M3 257 aa6.25□□□□□ -1.41
LSM8-204ENST00000424702 SLC25A38Q96DW6 304 aa6.25□□□□□ -1.41
LSM8-204ENST00000424702 STARD10Q9Y365 291 aa6.25□□□□□ -1.41
LSM8-204ENST00000424702 TRAV38-1A0A0B4J264 116 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 J3QT63 122 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 ARPC1BO15143 372 aaKnown RBP6.24□□□□□ -1.41
LSM8-204ENST00000424702 GSTZ1O43708 216 aaPredicted RBP6.24□□□□□ -1.41
LSM8-204ENST00000424702 PRAF2O60831 178 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 VSIG8P0DPA2 414 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 ZNF35P13682 527 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 IGFBP3P17936 291 aaPredicted RBP6.24□□□□□ -1.41
LSM8-204ENST00000424702 GABRA2P47869 451 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 CD83Q01151 205 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 TNK1Q13470 666 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 ACTBL2Q562R1 376 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 NCMAPQ5T1S8 102 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 ZGRF1Q86YA3 2104 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 OR5A2Q8NGI9 324 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 ITLN2Q8WWU7 325 aaPredicted RBP6.24□□□□□ -1.41
LSM8-204ENST00000424702 CLEC4MQ9H2X3 399 aaPredicted RBP6.24□□□□□ -1.41
LSM8-204ENST00000424702 CA10Q9NS85 328 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 TBC1D24Q9ULP9 559 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 CDC14BO60729 498 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 SRSF10O75494 262 aaKnown RBP6.24□□□□□ -1.41
LSM8-204ENST00000424702 PRF1P14222 555 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 GLRA1P23415 457 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 GPM6AP51674 278 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 CCR6P51684 374 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 EFNB2P52799 333 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 FOXG1P55316 489 aaPredicted RBP6.24□□□□□ -1.41
LSM8-204ENST00000424702 MAB21L1Q13394 359 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 RBMS2Q15434 407 aaKnown RBP6.24□□□□□ -1.41
LSM8-204ENST00000424702 TAF9Q16594 264 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 SP5Q6BEB4 398 aaPredicted RBP6.24□□□□□ -1.41
LSM8-204ENST00000424702 HAGHLQ6PII5 290 aaPredicted RBP6.24□□□□□ -1.41
LSM8-204ENST00000424702 OR8G5Q8NG78 346 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 MRPL24Q96A35 216 aaKnown RBP6.24□□□□□ -1.41
LSM8-204ENST00000424702 SOX7Q9BT81 388 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 PDCD10Q9BUL8 212 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 OR2J1Q9GZK6 312 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 HRASLSQ9HDD0 168 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 ZNF319Q9P2F9 582 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 MYO7BQ6PIF6 2116 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 FAM172BPA6NC97 362 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 H7C417 338 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 HS3ST1O14792 307 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 CREBL2O60519 120 aaPredicted RBP6.24□□□□□ -1.41
LSM8-204ENST00000424702 GNB3P16520 340 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 CCL1P22362 96 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 NTF4P34130 210 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 ARHGDIBP52566 201 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 TAS2R46P59540 309 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 IKZF1Q13422 519 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 HLXQ14774 488 aaPredicted RBP6.24□□□□□ -1.41
LSM8-204ENST00000424702 METTL11BQ5VVY1 283 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 OSR2Q8N2R0 312 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 OR4K15Q8NH41 348 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 FGFBP3Q8TAT2 258 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 NUDCD2Q8WVJ2 157 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 DEDD2Q8WXF8 326 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 DVL3Q92997 716 aaPredicted RBP6.24□□□□□ -1.41
LSM8-204ENST00000424702 DMRTB1Q96MA1 342 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 WFIKKN1Q96NZ8 548 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 SLC6A7Q99884 636 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 COMMD9Q9P000 198 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 RNF7Q9UBF6 113 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 MTFP1Q9UDX5 166 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 V9GYS6 101 aa6.24□□□□□ -1.41
LSM8-204ENST00000424702 LRP5LA4QPB2 252 aa6.23□□□□□ -1.41
LSM8-204ENST00000424702 MCRIP1C9JLW8 97 aa6.23□□□□□ -1.41
LSM8-204ENST00000424702 SH2D1BO14796 132 aa6.23□□□□□ -1.41
LSM8-204ENST00000424702 PPIHO43447 177 aaKnown RBP6.23□□□□□ -1.41
LSM8-204ENST00000424702 MMP7P09237 267 aaPredicted RBP6.23□□□□□ -1.41
LSM8-204ENST00000424702 SPNP16150 400 aa6.23□□□□□ -1.41
LSM8-204ENST00000424702 C4BPBP20851 252 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms