RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 MAML2Q8IZL2 1156 aaPredicted RBP13.75□□□□□ -0.21
CDH1-202ENST00000422392 SPTSSAQ969W0 71 aa13.75□□□□□ -0.21
CDH1-202ENST00000422392 REEP6Q96HR9 211 aa13.75□□□□□ -0.21
CDH1-202ENST00000422392 ALKBH3Q96Q83 286 aaPredicted RBP13.75□□□□□ -0.21
CDH1-202ENST00000422392 PRRX2Q99811 253 aa13.75□□□□□ -0.21
CDH1-202ENST00000422392 AMDHD2Q9Y303 409 aa13.75□□□□□ -0.21
CDH1-202ENST00000422392 GEMIN2O14893 280 aaKnown RBP13.75□□□□□ -0.21
CDH1-202ENST00000422392 XRCC2O43543 280 aa13.75□□□□□ -0.21
CDH1-202ENST00000422392 OR5AC1P0C628 307 aa13.75□□□□□ -0.21
CDH1-202ENST00000422392 CXCL12P48061 93 aa13.75□□□□□ -0.21
CDH1-202ENST00000422392 TMEM156Q8N614 296 aa13.75□□□□□ -0.21
CDH1-202ENST00000422392 RXFP4Q8TDU9 374 aa13.75□□□□□ -0.21
CDH1-202ENST00000422392 SAP25Q8TEE9 199 aa13.75□□□□□ -0.21
CDH1-202ENST00000422392 MR1Q95460 341 aa13.75□□□□□ -0.21
CDH1-202ENST00000422392 SAT2Q96F10 170 aaPredicted RBP13.75□□□□□ -0.21
CDH1-202ENST00000422392 CMSS1Q9BQ75 279 aaKnown RBP13.75□□□□□ -0.21
CDH1-202ENST00000422392 CRLF2Q9HC73 371 aa13.75□□□□□ -0.21
CDH1-202ENST00000422392 ZNF407Q9C0G0 2248 aa13.74□□□□□ -0.21
CDH1-202ENST00000422392 ZNHIT1O43257 154 aa13.74□□□□□ -0.21
CDH1-202ENST00000422392 SGCEO43556 437 aa13.74□□□□□ -0.21
CDH1-202ENST00000422392 LCATP04180 440 aa13.74□□□□□ -0.21
CDH1-202ENST00000422392 CTSDP07339 412 aaPredicted RBP13.74□□□□□ -0.21
CDH1-202ENST00000422392 SPP1P10451 314 aa13.74□□□□□ -0.21
CDH1-202ENST00000422392 COX6A1P12074 109 aa13.74□□□□□ -0.21
CDH1-202ENST00000422392 NR2C1P13056 603 aa13.74□□□□□ -0.21
CDH1-202ENST00000422392 B4GALT1P15291 398 aa13.74□□□□□ -0.21
CDH1-202ENST00000422392 SULT1A2P50226 295 aa13.74□□□□□ -0.21
CDH1-202ENST00000422392 NOVA1P51513 510 aaKnown RBP13.74□□□□□ -0.21
CDH1-202ENST00000422392 FOXL2NBQ6ZUU3 175 aa13.74□□□□□ -0.21
CDH1-202ENST00000422392 DUSP23Q9BVJ7 150 aa13.74□□□□□ -0.21
CDH1-202ENST00000422392 METTL9Q9H1A3 318 aa13.74□□□□□ -0.21
CDH1-202ENST00000422392 DOCK7Q96N67 2140 aa13.74□□□□□ -0.21
CDH1-202ENST00000422392 A0A0G2JMM0 328 aa13.74□□□□□ -0.21
CDH1-202ENST00000422392 A0A1W2PPB8 328 aa13.74□□□□□ -0.21
CDH1-202ENST00000422392 A0A1W2PRS3 328 aa13.74□□□□□ -0.21
CDH1-202ENST00000422392 KIR3DP1A8MWS1 328 aa13.74□□□□□ -0.21
CDH1-202ENST00000422392 NUDT19A8MXV4 375 aa13.74□□□□□ -0.21
CDH1-202ENST00000422392 EIF1BO60739 113 aaKnown RBP13.74□□□□□ -0.21
CDH1-202ENST00000422392 CST4P01036 141 aa13.74□□□□□ -0.21
CDH1-202ENST00000422392 CRYBA1P05813 215 aa13.74□□□□□ -0.21
CDH1-202ENST00000422392 FCGR3AP08637 254 aa13.74□□□□□ -0.21
CDH1-202ENST00000422392 DSCR4P56555 118 aaPredicted RBP13.74□□□□□ -0.21
CDH1-202ENST00000422392 ZNF528Q3MIS6 628 aa13.74□□□□□ -0.21
CDH1-202ENST00000422392 DHRS11Q6UWP2 260 aa13.74□□□□□ -0.21
CDH1-202ENST00000422392 BTNL8Q6UX41 500 aa13.74□□□□□ -0.21
CDH1-202ENST00000422392 PLXDC2Q6UX71 529 aa13.74□□□□□ -0.21
CDH1-202ENST00000422392 LYZL2Q7Z4W2 148 aa13.74□□□□□ -0.21
CDH1-202ENST00000422392 YRDCQ86U90 279 aaKnown RBP13.74□□□□□ -0.21
CDH1-202ENST00000422392 AKR1E2Q96JD6 320 aa13.74□□□□□ -0.21
CDH1-202ENST00000422392 ESRP2Q9H6T0 727 aaKnown RBP13.74□□□□□ -0.21
CDH1-202ENST00000422392 CCDC187A0A096LP49 1063 aa13.73□□□□□ -0.21
CDH1-202ENST00000422392 IGKV1-12A0A0C4DH73 117 aa13.73□□□□□ -0.21
CDH1-202ENST00000422392 MED19A0JLT2 244 aaPredicted RBP13.73□□□□□ -0.21
CDH1-202ENST00000422392 MEX3AA1L020 520 aaKnown RBP13.73□□□□□ -0.21
CDH1-202ENST00000422392 IGKV1D-12P01611 117 aa13.73□□□□□ -0.21
CDH1-202ENST00000422392 MBPP02686 304 aaPredicted RBP13.73□□□□□ -0.21
CDH1-202ENST00000422392 CCL4P13236 92 aa13.73□□□□□ -0.21
CDH1-202ENST00000422392 CRYGSP22914 178 aa13.73□□□□□ -0.21
CDH1-202ENST00000422392 FHITP49789 147 aa13.73□□□□□ -0.21
CDH1-202ENST00000422392 RAB13P51153 203 aa13.73□□□□□ -0.21
CDH1-202ENST00000422392 ZNF133P52736 654 aaPredicted RBP13.73□□□□□ -0.21
CDH1-202ENST00000422392 SMCO1Q147U7 214 aa13.73□□□□□ -0.21
CDH1-202ENST00000422392 OPN5Q6U736 354 aa13.73□□□□□ -0.21
CDH1-202ENST00000422392 OR5L1Q8NGL2 311 aa13.73□□□□□ -0.21
CDH1-202ENST00000422392 ANGPTL4Q9BY76 406 aa13.73□□□□□ -0.21
CDH1-202ENST00000422392 ZFP57Q9NU63 452 aa13.73□□□□□ -0.21
CDH1-202ENST00000422392 TUBD1Q9UJT1 453 aa13.73□□□□□ -0.21
CDH1-202ENST00000422392 HS3ST3B1Q9Y662 390 aa13.73□□□□□ -0.21
CDH1-202ENST00000422392 PRRC2CQ9Y520 2896 aaKnown RBP13.73□□□□□ -0.21
CDH1-202ENST00000422392 TAAR5O14804 337 aa13.73□□□□□ -0.21
CDH1-202ENST00000422392 SYNGR3O43761 229 aa13.73□□□□□ -0.21
CDH1-202ENST00000422392 ONECUT2O95948 504 aa13.73□□□□□ -0.21
CDH1-202ENST00000422392 IFNA21P01568 189 aa13.73□□□□□ -0.21
CDH1-202ENST00000422392 FKBP2P26885 142 aaKnown RBP13.73□□□□□ -0.21
CDH1-202ENST00000422392 RFC3P40938 356 aa13.73□□□□□ -0.21
CDH1-202ENST00000422392 KCNJ3P48549 501 aa13.73□□□□□ -0.21
CDH1-202ENST00000422392 HLA-BQ31612 363 aa13.73□□□□□ -0.21
CDH1-202ENST00000422392 NSUN5P2Q63ZY6 315 aa13.73□□□□□ -0.21
CDH1-202ENST00000422392 OR10AD1Q8NGE0 317 aa13.73□□□□□ -0.21
CDH1-202ENST00000422392 OR11L1Q8NGX0 322 aa13.73□□□□□ -0.21
CDH1-202ENST00000422392 SECTM1Q8WVN6 248 aa13.73□□□□□ -0.21
CDH1-202ENST00000422392 IMMP1LQ96LU5 166 aa13.73□□□□□ -0.21
CDH1-202ENST00000422392 A0A087WZY1 265 aa13.72□□□□□ -0.21
CDH1-202ENST00000422392 RRP8O43159 456 aaKnown RBP13.72□□□□□ -0.21
CDH1-202ENST00000422392 KLF7O75840 302 aaPredicted RBP13.72□□□□□ -0.21
CDH1-202ENST00000422392 VAMP5O95183 116 aa13.72□□□□□ -0.21
CDH1-202ENST00000422392 ZNF32P17041 273 aa13.72□□□□□ -0.21
CDH1-202ENST00000422392 SSR4P51571 173 aa13.72□□□□□ -0.21
CDH1-202ENST00000422392 FAM27BQ5VT28 67 aa13.72□□□□□ -0.21
CDH1-202ENST00000422392 LYSMD4Q5XG99 296 aa13.72□□□□□ -0.21
CDH1-202ENST00000422392 EIF5AL1Q6IS14 154 aaKnown RBP13.72□□□□□ -0.21
CDH1-202ENST00000422392 SLC22A25Q6T423 547 aa13.72□□□□□ -0.21
CDH1-202ENST00000422392 C5orf24Q7Z6I8 188 aa13.72□□□□□ -0.21
CDH1-202ENST00000422392 FGFBP3Q8TAT2 258 aa13.72□□□□□ -0.21
CDH1-202ENST00000422392 RTN4IP1Q8WWV3 396 aaPredicted RBP13.72□□□□□ -0.21
CDH1-202ENST00000422392 NAA11Q9BSU3 229 aaPredicted RBP13.72□□□□□ -0.21
CDH1-202ENST00000422392 FAM186AA6NE01 2351 aa13.72□□□□□ -0.21
CDH1-202ENST00000422392 NME2P1O60361 137 aa13.72□□□□□ -0.21
CDH1-202ENST00000422392 CD5P06127 495 aa13.72□□□□□ -0.21
CDH1-202ENST00000422392 ZNF728P0DKX0 622 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms