RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 IL24Q13007 206 aa9.4□□□□□ -0.9
SQSTM1-203ENST00000422245 TMEM200BQ69YZ2 307 aa9.4□□□□□ -0.9
SQSTM1-203ENST00000422245 KDM4DQ6B0I6 523 aa9.4□□□□□ -0.9
SQSTM1-203ENST00000422245 SLC35E4Q6ICL7 350 aa9.4□□□□□ -0.9
SQSTM1-203ENST00000422245 PLEKHG7Q6ZR37 379 aa9.4□□□□□ -0.9
SQSTM1-203ENST00000422245 Q6ZTK2 550 aa9.4□□□□□ -0.9
SQSTM1-203ENST00000422245 CALHM1Q8IU99 346 aa9.4□□□□□ -0.9
SQSTM1-203ENST00000422245 ZDHHC13Q8IUH4 622 aa9.4□□□□□ -0.9
SQSTM1-203ENST00000422245 DTX3Q8N9I9 347 aa9.4□□□□□ -0.9
SQSTM1-203ENST00000422245 CCDC54Q8NEL0 328 aa9.4□□□□□ -0.9
SQSTM1-203ENST00000422245 C17orf50Q8WW18 174 aa9.4□□□□□ -0.9
SQSTM1-203ENST00000422245 AJUBAQ96IF1 538 aa9.4□□□□□ -0.9
SQSTM1-203ENST00000422245 CADM1Q9BY67 442 aaKnown RBP9.4□□□□□ -0.9
SQSTM1-203ENST00000422245 MEGF9Q9H1U4 602 aa9.4□□□□□ -0.9
SQSTM1-203ENST00000422245 WARS2Q9UGM6 360 aaKnown RBP9.4□□□□□ -0.9
SQSTM1-203ENST00000422245 DYNC1I1O14576 645 aa9.39□□□□□ -0.91
SQSTM1-203ENST00000422245 MAGEB4O15481 346 aaPredicted RBP9.39□□□□□ -0.91
SQSTM1-203ENST00000422245 GATBO75879 557 aaKnown RBP9.39□□□□□ -0.91
SQSTM1-203ENST00000422245 RBP4P02753 201 aa9.39□□□□□ -0.91
SQSTM1-203ENST00000422245 TK1P04183 234 aa9.39□□□□□ -0.91
SQSTM1-203ENST00000422245 FCGR1AP12314 374 aa9.39□□□□□ -0.91
SQSTM1-203ENST00000422245 CCL3L1P16619 93 aa9.39□□□□□ -0.91
SQSTM1-203ENST00000422245 COX7A1P24310 79 aa9.39□□□□□ -0.91
SQSTM1-203ENST00000422245 FASP25445 335 aa9.39□□□□□ -0.91
SQSTM1-203ENST00000422245 EPHA2P29317 976 aa9.39□□□□□ -0.91
SQSTM1-203ENST00000422245 CEBPDP49716 269 aaPredicted RBP9.39□□□□□ -0.91
SQSTM1-203ENST00000422245 EFNB2P52799 333 aa9.39□□□□□ -0.91
SQSTM1-203ENST00000422245 LGALS4P56470 323 aa9.39□□□□□ -0.91
SQSTM1-203ENST00000422245 ERVK11-1P61568 191 aa9.39□□□□□ -0.91
SQSTM1-203ENST00000422245 ZNF273Q14593 569 aa9.39□□□□□ -0.91
SQSTM1-203ENST00000422245 HERPUD1Q15011 391 aa9.39□□□□□ -0.91
SQSTM1-203ENST00000422245 LY6EQ16553 131 aa9.39□□□□□ -0.91
SQSTM1-203ENST00000422245 YIPF7Q8N8F6 280 aa9.39□□□□□ -0.91
SQSTM1-203ENST00000422245 OR4M1Q8NGD0 313 aa9.39□□□□□ -0.91
SQSTM1-203ENST00000422245 OR2T27Q8NH04 317 aa9.39□□□□□ -0.91
SQSTM1-203ENST00000422245 OR2T6Q8NHC8 308 aa9.39□□□□□ -0.91
SQSTM1-203ENST00000422245 RORBQ92753 470 aa9.39□□□□□ -0.91
SQSTM1-203ENST00000422245 FOXRED1Q96CU9 486 aaPredicted RBP9.39□□□□□ -0.91
SQSTM1-203ENST00000422245 IL4I1Q96RQ9 567 aa9.39□□□□□ -0.91
SQSTM1-203ENST00000422245 NPFFR1Q9GZQ6 430 aa9.39□□□□□ -0.91
SQSTM1-203ENST00000422245 OR14J1Q9UGF5 321 aa9.39□□□□□ -0.91
SQSTM1-203ENST00000422245 SLC7A11Q9UPY5 501 aa9.39□□□□□ -0.91
SQSTM1-203ENST00000422245 SLC22A13Q9Y226 551 aa9.39□□□□□ -0.91
SQSTM1-203ENST00000422245 CMYA5Q8N3K9 4069 aa9.39□□□□□ -0.91
SQSTM1-203ENST00000422245 VGLL3A8MV65 326 aa9.38□□□□□ -0.91
SQSTM1-203ENST00000422245 K7N7A8 449 aa9.38□□□□□ -0.91
SQSTM1-203ENST00000422245 SYT7O43581 403 aa9.38□□□□□ -0.91
SQSTM1-203ENST00000422245 SULT1C4O75897 302 aa9.38□□□□□ -0.91
SQSTM1-203ENST00000422245 RPP14O95059 124 aaKnown RBP9.38□□□□□ -0.91
SQSTM1-203ENST00000422245 CSF1P09603 554 aa9.38□□□□□ -0.91
SQSTM1-203ENST00000422245 OR2T7P0C7T2 308 aa9.38□□□□□ -0.91
SQSTM1-203ENST00000422245 PIPP12273 146 aaPredicted RBP9.38□□□□□ -0.91
SQSTM1-203ENST00000422245 HTR1FP30939 366 aa9.38□□□□□ -0.91
SQSTM1-203ENST00000422245 KIR2DS4P43632 304 aa9.38□□□□□ -0.91
SQSTM1-203ENST00000422245 BMXP51813 675 aa9.38□□□□□ -0.91
SQSTM1-203ENST00000422245 CRIP3Q6Q6R5 217 aa9.38□□□□□ -0.91
SQSTM1-203ENST00000422245 ZNF782Q6ZMW2 699 aaPredicted RBP9.38□□□□□ -0.91
SQSTM1-203ENST00000422245 SSX6Q7RTT6 188 aa9.38□□□□□ -0.91
SQSTM1-203ENST00000422245 FAM220AQ7Z4H9 259 aa9.38□□□□□ -0.91
SQSTM1-203ENST00000422245 CATSPERDQ86XM0 798 aa9.38□□□□□ -0.91
SQSTM1-203ENST00000422245 BATF2Q8N1L9 274 aa9.38□□□□□ -0.91
SQSTM1-203ENST00000422245 C11orf42Q8N5U0 333 aa9.38□□□□□ -0.91
SQSTM1-203ENST00000422245 ASCC1Q8N9N2 400 aaKnown RBP9.38□□□□□ -0.91
SQSTM1-203ENST00000422245 PPP1R35Q8TAP8 253 aa9.38□□□□□ -0.91
SQSTM1-203ENST00000422245 TRMT10AQ8TBZ6 339 aaKnown RBP9.38□□□□□ -0.91
SQSTM1-203ENST00000422245 CEP19Q96LK0 163 aa9.38□□□□□ -0.91
SQSTM1-203ENST00000422245 TBX5Q99593 518 aa9.38□□□□□ -0.91
SQSTM1-203ENST00000422245 CIB1Q99828 191 aa9.38□□□□□ -0.91
SQSTM1-203ENST00000422245 GABARAPL3Q9BY60 117 aa9.38□□□□□ -0.91
SQSTM1-203ENST00000422245 CHST5Q9GZS9 411 aa9.38□□□□□ -0.91
SQSTM1-203ENST00000422245 TBL2Q9Y4P3 447 aaKnown RBP9.38□□□□□ -0.91
SQSTM1-203ENST00000422245 AP4S1Q9Y587 144 aa9.38□□□□□ -0.91
SQSTM1-203ENST00000422245 A0A0G2JK05 382 aa9.37□□□□□ -0.91
SQSTM1-203ENST00000422245 FAM230AA0A1W2PPH8 454 aa9.37□□□□□ -0.91
SQSTM1-203ENST00000422245 A0A1W2PQL4 384 aaPredicted RBP9.37□□□□□ -0.91
SQSTM1-203ENST00000422245 A6NIN4 97 aa9.37□□□□□ -0.91
SQSTM1-203ENST00000422245 METTL15A6NJ78 407 aa9.37□□□□□ -0.91
SQSTM1-203ENST00000422245 C17orf98A8MV24 154 aa9.37□□□□□ -0.91
SQSTM1-203ENST00000422245 ODF3BA8MYP8 253 aa9.37□□□□□ -0.91
SQSTM1-203ENST00000422245 ZNF737O75373 536 aa9.37□□□□□ -0.91
SQSTM1-203ENST00000422245 CHRM2P08172 466 aa9.37□□□□□ -0.91
SQSTM1-203ENST00000422245 UBCP0CG48 685 aaKnown RBP9.37□□□□□ -0.91
SQSTM1-203ENST00000422245 ZNF728P0DKX0 622 aa9.37□□□□□ -0.91
SQSTM1-203ENST00000422245 ATP6V1E1P36543 226 aa9.37□□□□□ -0.91
SQSTM1-203ENST00000422245 RASSF2P50749 326 aa9.37□□□□□ -0.91
SQSTM1-203ENST00000422245 DLX6P56179 175 aa9.37□□□□□ -0.91
SQSTM1-203ENST00000422245 COL10A1Q03692 680 aa9.37□□□□□ -0.91
SQSTM1-203ENST00000422245 BNIP1Q12981 228 aa9.37□□□□□ -0.91
SQSTM1-203ENST00000422245 TMED1Q13445 227 aa9.37□□□□□ -0.91
SQSTM1-203ENST00000422245 CNN3Q15417 329 aaKnown RBP9.37□□□□□ -0.91
SQSTM1-203ENST00000422245 ODF4Q2M2E3 257 aa9.37□□□□□ -0.91
SQSTM1-203ENST00000422245 C1orf146Q5VVC0 180 aa9.37□□□□□ -0.91
SQSTM1-203ENST00000422245 ANGPTL5Q86XS5 388 aa9.37□□□□□ -0.91
SQSTM1-203ENST00000422245 Q8IYB0 196 aa9.37□□□□□ -0.91
SQSTM1-203ENST00000422245 OR8H2Q8N162 312 aa9.37□□□□□ -0.91
SQSTM1-203ENST00000422245 KLHDC1Q8N7A1 406 aa9.37□□□□□ -0.91
SQSTM1-203ENST00000422245 OR10H4Q8NGA5 316 aa9.37□□□□□ -0.91
SQSTM1-203ENST00000422245 OR8J1Q8NGP2 316 aa9.37□□□□□ -0.91
SQSTM1-203ENST00000422245 OR13D1Q8NGV5 346 aa9.37□□□□□ -0.91
SQSTM1-203ENST00000422245 FAM110DQ8TAY7 271 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms