RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 TMEM30CPA0ZSE6 113 aa8.52□□□□□ -1.05
CMSS1-201ENST00000421999 ATP6V1G2-DDX39BF2Z307 99 aa8.52□□□□□ -1.05
CMSS1-201ENST00000421999 KLF4O43474 513 aa8.52□□□□□ -1.05
CMSS1-201ENST00000421999 IGHA1P01876 353 aa8.52□□□□□ -1.05
CMSS1-201ENST00000421999 PRF1P14222 555 aa8.52□□□□□ -1.05
CMSS1-201ENST00000421999 OR52W1Q6IF63 320 aa8.52□□□□□ -1.05
CMSS1-201ENST00000421999 CDC20BQ86Y33 519 aa8.52□□□□□ -1.05
CMSS1-201ENST00000421999 SKA3Q8IX90 412 aa8.52□□□□□ -1.05
CMSS1-201ENST00000421999 OR52N4Q8NGI2 321 aa8.52□□□□□ -1.05
CMSS1-201ENST00000421999 OR10V1Q8NGI7 309 aa8.52□□□□□ -1.05
CMSS1-201ENST00000421999 ZNF426Q9BUY5 554 aa8.52□□□□□ -1.05
CMSS1-201ENST00000421999 MSRB2Q9Y3D2 182 aa8.52□□□□□ -1.05
CMSS1-201ENST00000421999 PRUNE2Q8WUY3 3088 aa8.52□□□□□ -1.05
CMSS1-201ENST00000421999 PCDH15Q96QU1 1955 aa8.52□□□□□ -1.05
CMSS1-201ENST00000421999 NEURL1O76050 574 aa8.52□□□□□ -1.05
CMSS1-201ENST00000421999 CRYBB2P43320 205 aa8.52□□□□□ -1.05
CMSS1-201ENST00000421999 GNG10P50151 68 aa8.52□□□□□ -1.05
CMSS1-201ENST00000421999 CCR6P51684 374 aa8.52□□□□□ -1.05
CMSS1-201ENST00000421999 PSG4Q00888 419 aa8.52□□□□□ -1.05
CMSS1-201ENST00000421999 GGTLC2Q14390 218 aa8.52□□□□□ -1.05
CMSS1-201ENST00000421999 STEAP3Q658P3 488 aa8.52□□□□□ -1.05
CMSS1-201ENST00000421999 OR10R2Q8NGX6 335 aa8.52□□□□□ -1.05
CMSS1-201ENST00000421999 SFXN3Q9BWM7 321 aa8.52□□□□□ -1.05
CMSS1-201ENST00000421999 CYSLTR2Q9NS75 346 aa8.52□□□□□ -1.05
CMSS1-201ENST00000421999 STARD10Q9Y365 291 aa8.52□□□□□ -1.05
CMSS1-201ENST00000421999 TRAF3IP2O43734 574 aaPredicted RBP8.52□□□□□ -1.05
CMSS1-201ENST00000421999 MST1P26927 711 aa8.52□□□□□ -1.05
CMSS1-201ENST00000421999 GPR6P46095 362 aaPredicted RBP8.52□□□□□ -1.05
CMSS1-201ENST00000421999 SUCLG1P53597 346 aaKnown RBP8.52□□□□□ -1.05
CMSS1-201ENST00000421999 FAM27E3Q08E93 113 aa8.52□□□□□ -1.05
CMSS1-201ENST00000421999 TATDN3Q17R31 274 aa8.52□□□□□ -1.05
CMSS1-201ENST00000421999 AKR1C8PQ5T2L2 129 aa8.52□□□□□ -1.05
CMSS1-201ENST00000421999 LAIR2Q6ISS4 152 aa8.52□□□□□ -1.05
CMSS1-201ENST00000421999 DBX2Q6ZNG2 339 aa8.52□□□□□ -1.05
CMSS1-201ENST00000421999 GLRX5Q86SX6 157 aa8.52□□□□□ -1.05
CMSS1-201ENST00000421999 TNFRSF19Q9NS68 423 aa8.52□□□□□ -1.05
CMSS1-201ENST00000421999 KLHDC2Q9Y2U9 406 aa8.52□□□□□ -1.05
CMSS1-201ENST00000421999 PLXND1Q9Y4D7 1925 aa8.52□□□□□ -1.05
CMSS1-201ENST00000421999 RFX2P48378 723 aa8.51□□□□□ -1.05
CMSS1-201ENST00000421999 RPL19P84098 196 aaKnown RBP8.51□□□□□ -1.05
CMSS1-201ENST00000421999 DGCR2P98153 550 aa8.51□□□□□ -1.05
CMSS1-201ENST00000421999 BCL2A1Q16548 175 aa8.51□□□□□ -1.05
CMSS1-201ENST00000421999 CLEC2AQ6UVW9 174 aa8.51□□□□□ -1.05
CMSS1-201ENST00000421999 BTNL3Q6UXE8 466 aa8.51□□□□□ -1.05
CMSS1-201ENST00000421999 H2BFWTQ7Z2G1 175 aa8.51□□□□□ -1.05
CMSS1-201ENST00000421999 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.51□□□□□ -1.052e-6■■■■□ 20.1
CMSS1-201ENST00000421999 ADAMTS9Q9P2N4 1935 aa8.51□□□□□ -1.05
CMSS1-201ENST00000421999 BOLA2-SMG1P6H3BVE0 249 aa8.51□□□□□ -1.05
CMSS1-201ENST00000421999 GABARAPH6UMI1 98 aa8.51□□□□□ -1.05
CMSS1-201ENST00000421999 SHOXO15266 292 aa8.51□□□□□ -1.05
CMSS1-201ENST00000421999 TXNDC12O95881 172 aa8.51□□□□□ -1.05
CMSS1-201ENST00000421999 MT-CO2P00403 227 aa8.51□□□□□ -1.05
CMSS1-201ENST00000421999 MFGE8Q08431 387 aaPredicted RBP8.51□□□□□ -1.05
CMSS1-201ENST00000421999 FAM76BQ5HYJ3 339 aa8.51□□□□□ -1.05
CMSS1-201ENST00000421999 LINC00114Q6XXX2 140 aa8.51□□□□□ -1.05
CMSS1-201ENST00000421999 PIP4P1Q86T03 277 aa8.51□□□□□ -1.05
CMSS1-201ENST00000421999 SLC35G3Q8N808 338 aa8.51□□□□□ -1.05
CMSS1-201ENST00000421999 ADAMTS17Q8TE56 1095 aa8.51□□□□□ -1.05
CMSS1-201ENST00000421999 RPEQ96AT9 228 aa8.51□□□□□ -1.05
CMSS1-201ENST00000421999 KCNK17Q96T54 332 aa8.51□□□□□ -1.05
CMSS1-201ENST00000421999 ZNF251Q9BRH9 671 aa8.51□□□□□ -1.05
CMSS1-201ENST00000421999 FOXJ3Q9UPW0 622 aa8.51□□□□□ -1.05
CMSS1-201ENST00000421999 PINLYPA6NC86 204 aa8.51□□□□□ -1.05
CMSS1-201ENST00000421999 DEFB108AA8MXU0 73 aa8.51□□□□□ -1.05
CMSS1-201ENST00000421999 AKR1C1Q04828 323 aa8.51□□□□□ -1.05
CMSS1-201ENST00000421999 IAH1Q2TAA2 248 aaPredicted RBP8.51□□□□□ -1.05
CMSS1-201ENST00000421999 SSX8Q7RTT4 187 aa8.51□□□□□ -1.05
CMSS1-201ENST00000421999 LGI3Q8N145 548 aa8.51□□□□□ -1.05
CMSS1-201ENST00000421999 FADS6Q8N9I5 356 aa8.51□□□□□ -1.05
CMSS1-201ENST00000421999 GRPEL2Q8TAA5 225 aa8.51□□□□□ -1.05
CMSS1-201ENST00000421999 GIMAP1Q8WWP7 306 aa8.51□□□□□ -1.05
CMSS1-201ENST00000421999 SLC25A21Q9BQT8 299 aaPredicted RBP8.51□□□□□ -1.05
CMSS1-201ENST00000421999 MFFQ9GZY8 342 aa8.51□□□□□ -1.05
CMSS1-201ENST00000421999 SCPEP1Q9HB40 452 aa8.51□□□□□ -1.05
CMSS1-201ENST00000421999 PPP1R14DQ9NXH3 145 aa8.51□□□□□ -1.05
CMSS1-201ENST00000421999 FRRS1LQ9P0K9 344 aa8.51□□□□□ -1.05
CMSS1-201ENST00000421999 CLN8Q9UBY8 286 aa8.51□□□□□ -1.05
CMSS1-201ENST00000421999 RNF115Q9Y4L5 304 aa8.51□□□□□ -1.05
CMSS1-201ENST00000421999 hADV38S2A0JD32 116 aa8.5□□□□□ -1.05
CMSS1-201ENST00000421999 NCBP2LA6PVI3 153 aaKnown RBP8.5□□□□□ -1.05
CMSS1-201ENST00000421999 NFYAP23511 347 aaPredicted RBP8.5□□□□□ -1.05
CMSS1-201ENST00000421999 RPS4XP62701 263 aaKnown RBP8.5□□□□□ -1.05
CMSS1-201ENST00000421999 SRPXP78539 464 aa8.5□□□□□ -1.05
CMSS1-201ENST00000421999 KRBOX4Q5JUW0 171 aa8.5□□□□□ -1.05
CMSS1-201ENST00000421999 VWA1Q6PCB0 445 aa8.5□□□□□ -1.05
CMSS1-201ENST00000421999 SLC16A12Q6ZSM3 486 aa8.5□□□□□ -1.05
CMSS1-201ENST00000421999 LYG1Q8N1E2 194 aa8.5□□□□□ -1.05
CMSS1-201ENST00000421999 RNF133Q8WVZ7 376 aa8.5□□□□□ -1.05
CMSS1-201ENST00000421999 AMELYQ99218 206 aa8.5□□□□□ -1.05
CMSS1-201ENST00000421999 PIGMQ9H3S5 423 aa8.5□□□□□ -1.05
CMSS1-201ENST00000421999 RBFOX1Q9NWB1 397 aaKnown RBP8.5□□□□□ -1.05
CMSS1-201ENST00000421999 RNF7Q9UBF6 113 aa8.5□□□□□ -1.05
CMSS1-201ENST00000421999 PGA4P0DJD7 388 aa8.5□□□□□ -1.05
CMSS1-201ENST00000421999 PGA3P0DJD8 388 aa8.5□□□□□ -1.05
CMSS1-201ENST00000421999 UCP2P55851 309 aa8.5□□□□□ -1.05
CMSS1-201ENST00000421999 RTL8BQ17RB0 113 aa8.5□□□□□ -1.05
CMSS1-201ENST00000421999 PDZD9Q8IXQ8 264 aa8.5□□□□□ -1.05
CMSS1-201ENST00000421999 FBXO7Q9Y3I1 522 aa8.5□□□□□ -1.05
CMSS1-201ENST00000421999 MEIOCA2RUB1 952 aa8.5□□□□□ -1.05
CMSS1-201ENST00000421999 TMEM200CA6NKL6 621 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms