RNA–Protein interactions for RNA: ENST00000415891.5

CLIP4-205, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-205ENST00000415891 HIST1H2BBP33778 126 aa5.84□□□□□ -1.47
CLIP4-205ENST00000415891 HIST1H2BDP58876 126 aa5.84□□□□□ -1.47
CLIP4-205ENST00000415891 HIST1H2BCP62807 126 aa5.84□□□□□ -1.47
CLIP4-205ENST00000415891 MEF2BQ02080 365 aaPredicted RBP5.84□□□□□ -1.47
CLIP4-205ENST00000415891 GAGE4Q13068 117 aa5.84□□□□□ -1.47
CLIP4-205ENST00000415891 DHRS2Q13268 280 aa5.84□□□□□ -1.47
CLIP4-205ENST00000415891 HIST2H2BEQ16778 126 aa5.84□□□□□ -1.47
CLIP4-205ENST00000415891 CRB2Q5IJ48 1285 aa5.84□□□□□ -1.47
CLIP4-205ENST00000415891 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.84□□□□□ -1.47
CLIP4-205ENST00000415891 TMEM215Q68D42 235 aa5.84□□□□□ -1.47
CLIP4-205ENST00000415891 HEPN1Q6WQI6 88 aa5.84□□□□□ -1.47
CLIP4-205ENST00000415891 ZNF66Q6ZN08 573 aa5.84□□□□□ -1.47
CLIP4-205ENST00000415891 MEPCEQ7L2J0 689 aaKnown RBP5.84□□□□□ -1.47
CLIP4-205ENST00000415891 ZADH2Q8N4Q0 377 aa5.84□□□□□ -1.47
CLIP4-205ENST00000415891 ZNRF2Q8NHG8 242 aa5.84□□□□□ -1.47
CLIP4-205ENST00000415891 CLEC4CQ8WTT0 213 aa5.84□□□□□ -1.47
CLIP4-205ENST00000415891 HIST1H2BHQ93079 126 aa5.84□□□□□ -1.47
CLIP4-205ENST00000415891 NEIL2Q969S2 332 aa5.84□□□□□ -1.47
CLIP4-205ENST00000415891 RNF166Q96A37 237 aaPredicted RBP5.84□□□□□ -1.47
CLIP4-205ENST00000415891 PNMA5Q96PV4 448 aa5.84□□□□□ -1.47
CLIP4-205ENST00000415891 HIST1H2BNQ99877 126 aa5.84□□□□□ -1.47
CLIP4-205ENST00000415891 HIST1H2BMQ99879 126 aa5.84□□□□□ -1.47
CLIP4-205ENST00000415891 EBPLQ9BY08 206 aa5.84□□□□□ -1.47
CLIP4-205ENST00000415891 DEFB129Q9H1M3 183 aa5.84□□□□□ -1.47
CLIP4-205ENST00000415891 SEC61A2Q9H9S3 476 aa5.84□□□□□ -1.47
CLIP4-205ENST00000415891 EXOSC3Q9NQT5 275 aaKnown RBP5.84□□□□□ -1.47
CLIP4-205ENST00000415891 TMEM45AQ9NWC5 275 aa5.84□□□□□ -1.47
CLIP4-205ENST00000415891 ZNF586Q9NXT0 402 aa5.84□□□□□ -1.47
CLIP4-205ENST00000415891 TANC1Q9C0D5 1861 aa5.84□□□□□ -1.47
CLIP4-205ENST00000415891 TRAV36DV7A0A075B6V5 113 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 CASTOR2A6NHX0 329 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 E9PLN8 166 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 SLC37A4O43826 429 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 TGFBR1P36897 503 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 CTBP2P56545 445 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 TAS2R31P59538 309 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 UBA52P62987 128 aaKnown RBP5.83□□□□□ -1.48
CLIP4-205ENST00000415891 FOXL1Q12952 345 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 HSPB3Q12988 150 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 C1orf61Q13536 156 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 RUNX3Q13761 415 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 AGERQ15109 404 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 PDGFRLQ15198 375 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 TRMT12Q53H54 448 aaKnown RBP5.83□□□□□ -1.48
CLIP4-205ENST00000415891 GFI1BQ5VTD9 330 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 TBPL2Q6SJ96 375 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 RNF144BQ7Z419 303 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 FAM19A5Q7Z5A7 132 aaPredicted RBP5.83□□□□□ -1.48
CLIP4-205ENST00000415891 OR1B1Q8NGR6 318 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 ACER1Q8TDN7 264 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 UPRTQ96BW1 309 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 MRPL53Q96EL3 112 aaKnown RBP5.83□□□□□ -1.48
CLIP4-205ENST00000415891 RETNQ9HD89 108 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 V9GYH0 126 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 FOCADQ5VW36 1801 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 C1orf167Q5SNV9 1468 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 NWD2Q9ULI1 1742 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 LTN1O94822 1766 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 A0A0A6YYD5 115 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 G3V3Q6 166 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 PLA2G10O15496 165 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 ZNF207O43670 478 aaKnown RBP5.83□□□□□ -1.48
CLIP4-205ENST00000415891 KLF8O95600 359 aaPredicted RBP5.83□□□□□ -1.48
CLIP4-205ENST00000415891 AMY1AP04745 511 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 SULT1A3P0DMM9 295 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 SULT1A4P0DMN0 295 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 HTR1DP28221 377 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 SRIP30626 198 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 OR10J1P30954 320 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 TSFMP43897 325 aaKnown RBP5.83□□□□□ -1.48
CLIP4-205ENST00000415891 POLR2HP52434 150 aaKnown RBP5.83□□□□□ -1.48
CLIP4-205ENST00000415891 FOXA1P55317 472 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 XGP55808 180 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 BACE1P56817 501 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 OR12D2P58182 307 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 LSM3P62310 102 aaKnown RBP5.83□□□□□ -1.48
CLIP4-205ENST00000415891 RPS25P62851 125 aaKnown RBP5.83□□□□□ -1.48
CLIP4-205ENST00000415891 PPP1R1AQ13522 171 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 VGLL4Q14135 290 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 RBM39Q14498 530 aaKnown RBP5.83□□□□□ -1.48
CLIP4-205ENST00000415891 ELAVL1Q15717 326 aaKnown RBP5.83□□□□□ -1.48
CLIP4-205ENST00000415891 UBE2V2Q15819 145 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 TDRG1Q3Y452 100 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 ZNF549Q6P9A3 640 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 UNQ5815/PRO19632Q6UWF5 114 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 ZNF571Q7Z3V5 609 aaPredicted RBP5.83□□□□□ -1.48
CLIP4-205ENST00000415891 MEX3DQ86XN8 651 aaKnown RBP5.83□□□□□ -1.48
CLIP4-205ENST00000415891 ZNF440Q8IYI8 595 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 OR4C13Q8NGP0 309 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 OR1F12Q8NHA8 337 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 TIMD4Q96H15 378 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 AJUBAQ96IF1 538 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 C1QTNF5Q9BXJ0 243 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 PRDM14Q9GZV8 571 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 OR52D1Q9H346 318 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 BET1LQ9NYM9 111 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 IDI2-AS1Q9NZ38 188 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 GNG12Q9UBI6 72 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 WIPI2Q9Y4P8 454 aa5.83□□□□□ -1.48
CLIP4-205ENST00000415891 CCDC88AQ3V6T2 1871 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms