RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 MEGF9Q9H1U4 602 aa7.75□□□□□ -1.17
RFFL-203ENST00000413582 SRA1Q9HD15 236 aaKnown RBP7.75□□□□□ -1.17
RFFL-203ENST00000413582 INPP5EQ9NRR6 644 aa7.75□□□□□ -1.17
RFFL-203ENST00000413582 C14orf119Q9NWQ9 140 aa7.75□□□□□ -1.17
RFFL-203ENST00000413582 DIMT1Q9UNQ2 313 aaKnown RBP7.75□□□□□ -1.17
RFFL-203ENST00000413582 SNX5Q9Y5X3 404 aa7.75□□□□□ -1.17
RFFL-203ENST00000413582 RYR2Q92736 4967 aa7.74□□□□□ -1.17
RFFL-203ENST00000413582 CCDC182A6NF36 153 aa7.74□□□□□ -1.17
RFFL-203ENST00000413582 M0R129 80 aa7.74□□□□□ -1.17
RFFL-203ENST00000413582 ANGPTL7O43827 346 aa7.74□□□□□ -1.17
RFFL-203ENST00000413582 IGHA1P01876 353 aa7.74□□□□□ -1.17
RFFL-203ENST00000413582 GYPBP06028 91 aa7.74□□□□□ -1.17
RFFL-203ENST00000413582 CLUP10909 449 aa7.74□□□□□ -1.17
RFFL-203ENST00000413582 CD33P20138 364 aa7.74□□□□□ -1.17
RFFL-203ENST00000413582 PYCR1P32322 319 aa7.74□□□□□ -1.17
RFFL-203ENST00000413582 ACTC1P68032 377 aa7.74□□□□□ -1.17
RFFL-203ENST00000413582 ACTA1P68133 377 aa7.74□□□□□ -1.17
RFFL-203ENST00000413582 ST3GAL4Q11206 333 aa7.74□□□□□ -1.17
RFFL-203ENST00000413582 KLHL12Q53G59 568 aa7.74□□□□□ -1.17
RFFL-203ENST00000413582 ATPAF1Q5TC12 328 aaPredicted RBP7.74□□□□□ -1.17
RFFL-203ENST00000413582 LINC01590Q5TEZ4 76 aa7.74□□□□□ -1.17
RFFL-203ENST00000413582 LYPD4Q6UWN0 246 aa7.74□□□□□ -1.17
RFFL-203ENST00000413582 DTX3Q8N9I9 347 aa7.74□□□□□ -1.17
RFFL-203ENST00000413582 OR1M1Q8NGA1 313 aa7.74□□□□□ -1.17
RFFL-203ENST00000413582 OR51L1Q8NGJ5 315 aa7.74□□□□□ -1.17
RFFL-203ENST00000413582 OR2AJ1Q8NGZ0 328 aa7.74□□□□□ -1.17
RFFL-203ENST00000413582 OR8S1Q8NH09 359 aa7.74□□□□□ -1.17
RFFL-203ENST00000413582 PIFOQ8TCI5 191 aa7.74□□□□□ -1.17
RFFL-203ENST00000413582 FCGR1BQ92637 280 aa7.74□□□□□ -1.17
RFFL-203ENST00000413582 OTULINQ96BN8 352 aa7.74□□□□□ -1.17
RFFL-203ENST00000413582 LGALS12Q96DT0 336 aa7.74□□□□□ -1.17
RFFL-203ENST00000413582 RNFT2Q96EX2 444 aa7.74□□□□□ -1.17
RFFL-203ENST00000413582 MRPL48Q96GC5 212 aaKnown RBP7.74□□□□□ -1.17
RFFL-203ENST00000413582 GAFA1Q96PS6 74 aa7.74□□□□□ -1.17
RFFL-203ENST00000413582 NKX3-1Q99801 234 aaPredicted RBP7.74□□□□□ -1.17
RFFL-203ENST00000413582 WNT10AQ9GZT5 417 aa7.74□□□□□ -1.17
RFFL-203ENST00000413582 DNTTIP1Q9H147 329 aa7.74□□□□□ -1.17
RFFL-203ENST00000413582 OR51V1Q9H2C8 321 aa7.74□□□□□ -1.17
RFFL-203ENST00000413582 MED20Q9H944 212 aa7.74□□□□□ -1.17
RFFL-203ENST00000413582 VCX3AQ9NNX9 186 aa7.74□□□□□ -1.17
RFFL-203ENST00000413582 MRPL22Q9NWU5 206 aaKnown RBP7.74□□□□□ -1.17
RFFL-203ENST00000413582 AASSQ9UDR5 926 aa7.74□□□□□ -1.17
RFFL-203ENST00000413582 KCNG2Q9UJ96 466 aa7.74□□□□□ -1.17
RFFL-203ENST00000413582 EXOSC1Q9Y3B2 195 aaKnown RBP7.74□□□□□ -1.17
RFFL-203ENST00000413582 SF3B6Q9Y3B4 125 aaKnown RBP7.74□□□□□ -1.17
RFFL-203ENST00000413582 BIRC6Q9NR09 4857 aa7.74□□□□□ -1.17
RFFL-203ENST00000413582 A0A1W2PQ09 198 aa7.73□□□□□ -1.17
RFFL-203ENST00000413582 NKX6-3A6NJ46 265 aa7.73□□□□□ -1.17
RFFL-203ENST00000413582 J3QRE1 110 aa7.73□□□□□ -1.17
RFFL-203ENST00000413582 TFF1P04155 84 aa7.73□□□□□ -1.17
RFFL-203ENST00000413582 OR2T7P0C7T2 308 aa7.73□□□□□ -1.17
RFFL-203ENST00000413582 PSKH1P11801 424 aa7.73□□□□□ -1.17
RFFL-203ENST00000413582 JUNBP17275 347 aaPredicted RBP7.73□□□□□ -1.17
RFFL-203ENST00000413582 GSTT1P30711 240 aa7.73□□□□□ -1.17
RFFL-203ENST00000413582 ATP6V1E1P36543 226 aa7.73□□□□□ -1.17
RFFL-203ENST00000413582 KRTAP10-11P60412 298 aa7.73□□□□□ -1.17
RFFL-203ENST00000413582 RPS7P62081 194 aaKnown RBP7.73□□□□□ -1.17
RFFL-203ENST00000413582 CD69Q07108 199 aa7.73□□□□□ -1.17
RFFL-203ENST00000413582 IRF3Q14653 427 aa7.73□□□□□ -1.17
RFFL-203ENST00000413582 DGUOKQ16854 277 aa7.73□□□□□ -1.17
RFFL-203ENST00000413582 TEX30Q5JUR7 227 aa7.73□□□□□ -1.17
RFFL-203ENST00000413582 DRAM2Q6UX65 266 aa7.73□□□□□ -1.17
RFFL-203ENST00000413582 AHSA2Q719I0 299 aa7.73□□□□□ -1.17
RFFL-203ENST00000413582 SHFQ7M4L6 423 aa7.73□□□□□ -1.17
RFFL-203ENST00000413582 SLC16A9Q7RTY1 509 aa7.73□□□□□ -1.17
RFFL-203ENST00000413582 BCDIN3DQ7Z5W3 292 aaKnown RBP7.73□□□□□ -1.17
RFFL-203ENST00000413582 SPARTQ8N0X7 666 aa7.73□□□□□ -1.17
RFFL-203ENST00000413582 ACBD7Q8N6N7 88 aa7.73□□□□□ -1.17
RFFL-203ENST00000413582 PROKR2Q8NFJ6 384 aa7.73□□□□□ -1.17
RFFL-203ENST00000413582 BBS1Q8NFJ9 593 aa7.73□□□□□ -1.17
RFFL-203ENST00000413582 OR5T2Q8NGG2 359 aa7.73□□□□□ -1.17
RFFL-203ENST00000413582 OR52I1Q8NGK6 324 aa7.73□□□□□ -1.17
RFFL-203ENST00000413582 OR2T27Q8NH04 317 aa7.73□□□□□ -1.17
RFFL-203ENST00000413582 SPTSSAQ969W0 71 aa7.73□□□□□ -1.17
RFFL-203ENST00000413582 SPSB4Q96A44 273 aa7.73□□□□□ -1.17
RFFL-203ENST00000413582 B9D2Q9BPU9 175 aa7.73□□□□□ -1.17
RFFL-203ENST00000413582 YIPF3Q9GZM5 350 aa7.73□□□□□ -1.17
RFFL-203ENST00000413582 TLNRD1Q9H1K6 362 aa7.73□□□□□ -1.17
RFFL-203ENST00000413582 OPA3Q9H6K4 179 aa7.73□□□□□ -1.17
RFFL-203ENST00000413582 ELL3Q9HB65 397 aaPredicted RBP7.73□□□□□ -1.17
RFFL-203ENST00000413582 AMBNQ9NP70 447 aa7.73□□□□□ -1.17
RFFL-203ENST00000413582 BATF3Q9NR55 127 aa7.73□□□□□ -1.17
RFFL-203ENST00000413582 PAK1IP1Q9NWT1 392 aaPredicted RBP7.73□□□□□ -1.17
RFFL-203ENST00000413582 CHCHD3Q9NX63 227 aaKnown RBP7.73□□□□□ -1.17
RFFL-203ENST00000413582 SLC25A10Q9UBX3 287 aaPredicted RBP7.73□□□□□ -1.17
RFFL-203ENST00000413582 TMEM14AQ9Y6G1 99 aa7.73□□□□□ -1.17
RFFL-203ENST00000413582 COMMD3-BMI1R4GMX3 469 aa7.73□□□□□ -1.17
RFFL-203ENST00000413582 TVP23AA6NH52 213 aa7.72□□□□□ -1.17
RFFL-203ENST00000413582 ANKRD30BLA7E2S9 258 aa7.72□□□□□ -1.17
RFFL-203ENST00000413582 CDIPTO14735 213 aa7.72□□□□□ -1.17
RFFL-203ENST00000413582 SIGLEC5O15389 551 aa7.72□□□□□ -1.17
RFFL-203ENST00000413582 HTR1AP08908 422 aa7.72□□□□□ -1.17
RFFL-203ENST00000413582 SMIM18P0DKX4 95 aa7.72□□□□□ -1.17
RFFL-203ENST00000413582 SLC2A1P11166 492 aa7.72□□□□□ -1.17
RFFL-203ENST00000413582 MYL12AP19105 171 aa7.72□□□□□ -1.17
RFFL-203ENST00000413582 RPS27P42677 84 aaKnown RBP7.72□□□□□ -1.17
RFFL-203ENST00000413582 RPL5P46777 297 aaKnown RBP7.72□□□□□ -1.17
RFFL-203ENST00000413582 CAV3P56539 151 aa7.72□□□□□ -1.17
RFFL-203ENST00000413582 COL10A1Q03692 680 aa7.72□□□□□ -1.17
RFFL-203ENST00000413582 BLMHQ13867 455 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms