RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 TRAPPC2LH3BP13 241 aa9.07□□□□□ -0.96
CHMP3-205ENST00000409810 DVL1O14640 695 aa9.07□□□□□ -0.96
CHMP3-205ENST00000409810 RGS10O43665 173 aa9.07□□□□□ -0.96
CHMP3-205ENST00000409810 SULT1B1O43704 296 aa9.07□□□□□ -0.96
CHMP3-205ENST00000409810 PLATP00750 562 aa9.07□□□□□ -0.96
CHMP3-205ENST00000409810 CD1AP06126 327 aa9.07□□□□□ -0.96
CHMP3-205ENST00000409810 RAB3AP20336 220 aa9.07□□□□□ -0.96
CHMP3-205ENST00000409810 SOX2P48431 317 aa9.07□□□□□ -0.96
CHMP3-205ENST00000409810 POU3F4P49335 361 aa9.07□□□□□ -0.96
CHMP3-205ENST00000409810 MTCP1P56278 107 aa9.07□□□□□ -0.96
CHMP3-205ENST00000409810 SLC35A2P78381 396 aa9.07□□□□□ -0.96
CHMP3-205ENST00000409810 IL13RA1P78552 427 aa9.07□□□□□ -0.96
CHMP3-205ENST00000409810 BDH1Q02338 343 aa9.07□□□□□ -0.96
CHMP3-205ENST00000409810 ARMCX4Q5H9R4 360 aa9.07□□□□□ -0.96
CHMP3-205ENST00000409810 RBM48Q5RL73 367 aaKnown RBP9.07□□□□□ -0.96
CHMP3-205ENST00000409810 DMKNQ6E0U4 476 aaPredicted RBP9.07□□□□□ -0.96
CHMP3-205ENST00000409810 SLC25A26Q70HW3 274 aa9.07□□□□□ -0.96
CHMP3-205ENST00000409810 C1QL2Q7Z5L3 287 aa9.07□□□□□ -0.96
CHMP3-205ENST00000409810 ANGPTL5Q86XS5 388 aa9.07□□□□□ -0.96
CHMP3-205ENST00000409810 NANOGP1Q8N7R0 232 aa9.07□□□□□ -0.96
CHMP3-205ENST00000409810 ZNF485Q8NCK3 441 aa9.07□□□□□ -0.96
CHMP3-205ENST00000409810 OR5T2Q8NGG2 359 aa9.07□□□□□ -0.96
CHMP3-205ENST00000409810 ANGPTL6Q8NI99 470 aa9.07□□□□□ -0.96
CHMP3-205ENST00000409810 ST8SIA4Q92187 359 aa9.07□□□□□ -0.96
CHMP3-205ENST00000409810 GHSRQ92847 366 aa9.07□□□□□ -0.96
CHMP3-205ENST00000409810 TMEM106AQ96A25 262 aa9.07□□□□□ -0.96
CHMP3-205ENST00000409810 SEH1LQ96EE3 360 aa9.07□□□□□ -0.96
CHMP3-205ENST00000409810 CEP19Q96LK0 163 aa9.07□□□□□ -0.96
CHMP3-205ENST00000409810 NRIP2Q9BQI9 281 aa9.07□□□□□ -0.96
CHMP3-205ENST00000409810 CDCA4Q9BXL8 241 aa9.07□□□□□ -0.96
CHMP3-205ENST00000409810 MMP26Q9NRE1 261 aa9.07□□□□□ -0.96
CHMP3-205ENST00000409810 CKLFQ9UBR5 152 aa9.07□□□□□ -0.96
CHMP3-205ENST00000409810 AUP1Q9Y679 476 aa9.07□□□□□ -0.96
CHMP3-205ENST00000409810 NF1P21359 2839 aa9.07□□□□□ -0.96
CHMP3-205ENST00000409810 IGKV1-27A0A075B6S5 117 aa9.06□□□□□ -0.96
CHMP3-205ENST00000409810 KIR2DS1A0A191URI9 304 aa9.06□□□□□ -0.96
CHMP3-205ENST00000409810 SIGLEC5O15389 551 aa9.06□□□□□ -0.96
CHMP3-205ENST00000409810 LALBAP00709 142 aa9.06□□□□□ -0.96
CHMP3-205ENST00000409810 KNG1P01042 644 aa9.06□□□□□ -0.96
CHMP3-205ENST00000409810 PPIAL4GP0DN37 164 aa9.06□□□□□ -0.96
CHMP3-205ENST00000409810 PSG2P11465 335 aa9.06□□□□□ -0.96
CHMP3-205ENST00000409810 CRHBPP24387 322 aa9.06□□□□□ -0.96
CHMP3-205ENST00000409810 PAX8Q06710 450 aa9.06□□□□□ -0.96
CHMP3-205ENST00000409810 ACSM1Q08AH1 577 aa9.06□□□□□ -0.96
CHMP3-205ENST00000409810 IKZF1Q13422 519 aa9.06□□□□□ -0.96
CHMP3-205ENST00000409810 KRTAP21-3Q3LHN1 58 aa9.06□□□□□ -0.96
CHMP3-205ENST00000409810 Q499Y3 187 aa9.06□□□□□ -0.96
CHMP3-205ENST00000409810 ZNF788Q6ZQV5 615 aa9.06□□□□□ -0.96
CHMP3-205ENST00000409810 ZNF561Q8N587 486 aa9.06□□□□□ -0.96
CHMP3-205ENST00000409810 FAM216BQ8N7L0 139 aa9.06□□□□□ -0.96
CHMP3-205ENST00000409810 ZFP41Q8N8Y5 198 aa9.06□□□□□ -0.96
CHMP3-205ENST00000409810 RGP1Q92546 391 aaPredicted RBP9.06□□□□□ -0.96
CHMP3-205ENST00000409810 EMG1Q92979 244 aaKnown RBP9.06□□□□□ -0.96
CHMP3-205ENST00000409810 SLAMF9Q96A28 289 aa9.06□□□□□ -0.96
CHMP3-205ENST00000409810 PGLYRP3Q96LB9 341 aa9.06□□□□□ -0.96
CHMP3-205ENST00000409810 DMRTB1Q96MA1 342 aa9.06□□□□□ -0.96
CHMP3-205ENST00000409810 GAFA1Q96PS6 74 aa9.06□□□□□ -0.96
CHMP3-205ENST00000409810 CCDC90BQ9GZT6 254 aa9.06□□□□□ -0.96
CHMP3-205ENST00000409810 DUSP21Q9H596 190 aa9.06□□□□□ -0.96
CHMP3-205ENST00000409810 HES4Q9HCC6 221 aa9.06□□□□□ -0.96
CHMP3-205ENST00000409810 SLC25A10Q9UBX3 287 aaPredicted RBP9.06□□□□□ -0.96
CHMP3-205ENST00000409810 METRNQ9UJH8 293 aa9.06□□□□□ -0.96
CHMP3-205ENST00000409810 SIRT4Q9Y6E7 314 aaPredicted RBP9.06□□□□□ -0.96
CHMP3-205ENST00000409810 TRBV5-5A0A0J9YX44 114 aa9.05□□□□□ -0.96
CHMP3-205ENST00000409810 PNMA8CA0A1B0GUJ8 204 aa9.05□□□□□ -0.96
CHMP3-205ENST00000409810 RFPL4AA6NLU0 287 aa9.05□□□□□ -0.96
CHMP3-205ENST00000409810 C22orf46C9J442 243 aa9.05□□□□□ -0.96
CHMP3-205ENST00000409810 RFPL4AL1F8VTS6 287 aa9.05□□□□□ -0.96
CHMP3-205ENST00000409810 CELP19835 753 aa9.05□□□□□ -0.96
CHMP3-205ENST00000409810 EEF1B2P24534 225 aaKnown RBP9.05□□□□□ -0.96
CHMP3-205ENST00000409810 MAPK3P27361 379 aaPredicted RBP9.05□□□□□ -0.96
CHMP3-205ENST00000409810 CAPZA1P52907 286 aa9.05□□□□□ -0.96
CHMP3-205ENST00000409810 CAV3P56539 151 aa9.05□□□□□ -0.96
CHMP3-205ENST00000409810 ERVK11-1P61568 191 aa9.05□□□□□ -0.96
CHMP3-205ENST00000409810 PAX2Q02962 417 aa9.05□□□□□ -0.96
CHMP3-205ENST00000409810 PDZK1IP1Q13113 114 aa9.05□□□□□ -0.96
CHMP3-205ENST00000409810 SPHARQ15513 63 aa9.05□□□□□ -0.96
CHMP3-205ENST00000409810 MED22Q15528 200 aa9.05□□□□□ -0.96
CHMP3-205ENST00000409810 BTN2A1Q7KYR7 527 aa9.05□□□□□ -0.96
CHMP3-205ENST00000409810 PRSS48Q7RTY5 328 aa9.05□□□□□ -0.96
CHMP3-205ENST00000409810 ZSCAN4Q8NAM6 433 aaPredicted RBP9.05□□□□□ -0.96
CHMP3-205ENST00000409810 TMEM185AQ8NFB2 350 aa9.05□□□□□ -0.96
CHMP3-205ENST00000409810 SDSLQ96GA7 329 aa9.05□□□□□ -0.96
CHMP3-205ENST00000409810 ZNF488Q96MN9 340 aa9.05□□□□□ -0.96
CHMP3-205ENST00000409810 GPER1Q99527 375 aa9.05□□□□□ -0.96
CHMP3-205ENST00000409810 RASSF4Q9H2L5 321 aa9.05□□□□□ -0.96
CHMP3-205ENST00000409810 RHOFQ9HBH0 211 aa9.05□□□□□ -0.96
CHMP3-205ENST00000409810 SMURF1Q9HCE7 757 aa9.05□□□□□ -0.96
CHMP3-205ENST00000409810 TAS2R4Q9NYW5 299 aa9.05□□□□□ -0.96
CHMP3-205ENST00000409810 OR14J1Q9UGF5 321 aa9.05□□□□□ -0.96
CHMP3-205ENST00000409810 GLS2Q9UI32 602 aa9.05□□□□□ -0.96
CHMP3-205ENST00000409810 ZNF222Q9UK12 451 aa9.05□□□□□ -0.96
CHMP3-205ENST00000409810 DSCAML1Q8TD84 2053 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 IGKV1D-17A0A075B6S4 117 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 A0A1B0GW55 424 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 ZNF879B4DU55 563 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 DENRO43583 198 aaKnown RBP9.04□□□□□ -0.96
CHMP3-205ENST00000409810 RRP9O43818 475 aaKnown RBP9.04□□□□□ -0.96
CHMP3-205ENST00000409810 AVPP01185 164 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 ALDOBP05062 364 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms