RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 PRRC2CQ9Y520 2896 aaKnown RBP17.36■□□□□ 0.37
USP39-204ENST00000409766 CCSO14618 274 aa17.36■□□□□ 0.37
USP39-204ENST00000409766 GEMIN2O14893 280 aaKnown RBP17.36■□□□□ 0.37
USP39-204ENST00000409766 NOS1APO75052 506 aaPredicted RBP17.36■□□□□ 0.37
USP39-204ENST00000409766 NGFP01138 241 aa17.36■□□□□ 0.37
USP39-204ENST00000409766 PLP2Q04941 152 aa17.36■□□□□ 0.37
USP39-204ENST00000409766 MALLQ13021 153 aa17.36■□□□□ 0.37
USP39-204ENST00000409766 HLXQ14774 488 aaPredicted RBP17.36■□□□□ 0.37
USP39-204ENST00000409766 HIKESHIQ53FT3 197 aa17.36■□□□□ 0.37
USP39-204ENST00000409766 CASTOR1Q8WTX7 329 aa17.36■□□□□ 0.37
USP39-204ENST00000409766 BCL2L2Q92843 193 aaPredicted RBP17.36■□□□□ 0.37
USP39-204ENST00000409766 SCGB3A2Q96PL1 93 aa17.36■□□□□ 0.37
USP39-204ENST00000409766 RTBDNQ9BSG5 229 aaPredicted RBP17.36■□□□□ 0.37
USP39-204ENST00000409766 PAPOLGQ9BWT3 736 aaKnown RBP17.36■□□□□ 0.37
USP39-204ENST00000409766 COL25A1Q9BXS0 654 aaPredicted RBP17.36■□□□□ 0.37
USP39-204ENST00000409766 UBQLN2Q9UHD9 624 aa17.36■□□□□ 0.37
USP39-204ENST00000409766 AK3Q9UIJ7 227 aa17.36■□□□□ 0.37
USP39-204ENST00000409766 STARD10Q9Y365 291 aa17.36■□□□□ 0.37
USP39-204ENST00000409766 URB1O60287 2271 aaKnown RBP17.35■□□□□ 0.37
USP39-204ENST00000409766 OR5H14A6NHG9 310 aa17.35■□□□□ 0.37
USP39-204ENST00000409766 DBX1A6NMT0 343 aa17.35■□□□□ 0.37
USP39-204ENST00000409766 TMUB2Q71RG4 321 aa17.35■□□□□ 0.37
USP39-204ENST00000409766 MRPL21Q7Z2W9 205 aaKnown RBP17.35■□□□□ 0.37
USP39-204ENST00000409766 DPPA2Q7Z7J5 298 aa17.35■□□□□ 0.37
USP39-204ENST00000409766 OR10AD1Q8NGE0 317 aa17.35■□□□□ 0.37
USP39-204ENST00000409766 SULT4A1Q9BR01 284 aa17.35■□□□□ 0.37
USP39-204ENST00000409766 CRIM1Q9NZV1 1036 aa17.35■□□□□ 0.37
USP39-204ENST00000409766 ST3GAL6Q9Y274 331 aa17.35■□□□□ 0.37
USP39-204ENST00000409766 PQLC2LA1A4F0 135 aa17.35■□□□□ 0.37
USP39-204ENST00000409766 RPA2P15927 270 aa17.35■□□□□ 0.37
USP39-204ENST00000409766 FGL1Q08830 312 aa17.35■□□□□ 0.37
USP39-204ENST00000409766 PRDX4Q13162 271 aa17.35■□□□□ 0.37
USP39-204ENST00000409766 ZNF611Q8N823 705 aa17.35■□□□□ 0.37
USP39-204ENST00000409766 WBP1Q96G27 269 aa17.35■□□□□ 0.37
USP39-204ENST00000409766 GMPPAQ96IJ6 420 aaPredicted RBP17.35■□□□□ 0.37
USP39-204ENST00000409766 PCDHB16Q9NRJ7 776 aa17.35■□□□□ 0.37
USP39-204ENST00000409766 EDARQ9UNE0 448 aa17.35■□□□□ 0.37
USP39-204ENST00000409766 MAB21L2Q9Y586 359 aa17.35■□□□□ 0.37
USP39-204ENST00000409766 RRP8O43159 456 aaKnown RBP17.34■□□□□ 0.37
USP39-204ENST00000409766 CST4P01036 141 aa17.34■□□□□ 0.37
USP39-204ENST00000409766 BAMBIQ13145 260 aa17.34■□□□□ 0.37
USP39-204ENST00000409766 CLN3Q13286 438 aa17.34■□□□□ 0.37
USP39-204ENST00000409766 SEC22AQ96IW7 307 aa17.34■□□□□ 0.37
USP39-204ENST00000409766 PDCD10Q9BUL8 212 aa17.34■□□□□ 0.37
USP39-204ENST00000409766 FGF23Q9GZV9 251 aaPredicted RBP17.34■□□□□ 0.37
USP39-204ENST00000409766 RPS10-NUDT3A0A1W2PQS6 291 aa17.33■□□□□ 0.37
USP39-204ENST00000409766 PI3P19957 117 aa17.33■□□□□ 0.37
USP39-204ENST00000409766 NSUN5P2Q63ZY6 315 aa17.33■□□□□ 0.37
USP39-204ENST00000409766 SLC25A26Q70HW3 274 aa17.33■□□□□ 0.37
USP39-204ENST00000409766 KCTD9Q7L273 389 aa17.33■□□□□ 0.37
USP39-204ENST00000409766 Q8NFD4 153 aa17.33■□□□□ 0.37
USP39-204ENST00000409766 HPSE2Q8WWQ2 592 aa17.33■□□□□ 0.37
USP39-204ENST00000409766 CMSS1Q9BQ75 279 aaKnown RBP17.33■□□□□ 0.37
USP39-204ENST00000409766 ANXA10Q9UJ72 324 aa17.33■□□□□ 0.37
USP39-204ENST00000409766 LINC00862A6NCI5 91 aa17.33■□□□□ 0.36
USP39-204ENST00000409766 DTYMKP23919 212 aa17.33■□□□□ 0.36
USP39-204ENST00000409766 RBM11P57052 281 aaKnown RBP17.33■□□□□ 0.36
USP39-204ENST00000409766 SUPT4H1P63272 117 aaKnown RBP17.33■□□□□ 0.36
USP39-204ENST00000409766 DAZAP2Q15038 168 aaPredicted RBP17.33■□□□□ 0.36
USP39-204ENST00000409766 CEACAM21Q3KPI0 293 aa17.33■□□□□ 0.36
USP39-204ENST00000409766 C3P1Q6ZMU1 363 aa17.33■□□□□ 0.36
USP39-204ENST00000409766 ZNF75AQ96N20 296 aa17.33■□□□□ 0.36
USP39-204ENST00000409766 ARL6Q9H0F7 186 aa17.33■□□□□ 0.36
USP39-204ENST00000409766 CLCF1Q9UBD9 225 aa17.33■□□□□ 0.36
USP39-204ENST00000409766 SFT2D2O95562 160 aa17.32■□□□□ 0.36
USP39-204ENST00000409766 APLNRP35414 380 aa17.32■□□□□ 0.36
USP39-204ENST00000409766 WNT5AP41221 380 aa17.32■□□□□ 0.36
USP39-204ENST00000409766 NPBWR2P48146 333 aa17.32■□□□□ 0.36
USP39-204ENST00000409766 SURF2Q15527 256 aaPredicted RBP17.32■□□□□ 0.36
USP39-204ENST00000409766 CLLU1Q5K131 121 aa17.32■□□□□ 0.36
USP39-204ENST00000409766 TMEM65Q6PI78 240 aa17.32■□□□□ 0.36
USP39-204ENST00000409766 MFFQ9GZY8 342 aa17.32■□□□□ 0.36
USP39-204ENST00000409766 IRF2BPLQ9H1B7 796 aa17.32■□□□□ 0.36
USP39-204ENST00000409766 OPA3Q9H6K4 179 aa17.32■□□□□ 0.36
USP39-204ENST00000409766 ZNF629Q9UEG4 869 aaPredicted RBP17.32■□□□□ 0.36
USP39-204ENST00000409766 FRYQ5TBA9 3013 aa17.32■□□□□ 0.36
USP39-204ENST00000409766 TRAV17A0A0B4J275 112 aa17.31■□□□□ 0.36
USP39-204ENST00000409766 WISP2O76076 250 aa17.31■□□□□ 0.36
USP39-204ENST00000409766 FCGR3AP08637 254 aa17.31■□□□□ 0.36
USP39-204ENST00000409766 GLRA1P23415 457 aa17.31■□□□□ 0.36
USP39-204ENST00000409766 ARPC4P59998 168 aa17.31■□□□□ 0.36
USP39-204ENST00000409766 BRICD5Q6PL45 260 aa17.31■□□□□ 0.36
USP39-204ENST00000409766 CLEC18BQ6UXF7 455 aa17.31■□□□□ 0.36
USP39-204ENST00000409766 P4HA3Q7Z4N8 544 aa17.31■□□□□ 0.36
USP39-204ENST00000409766 ZNF546Q86UE3 836 aa17.31■□□□□ 0.36
USP39-204ENST00000409766 ZDHHC23Q8IYP9 409 aa17.31■□□□□ 0.36
USP39-204ENST00000409766 PPP1R1CQ8WVI7 109 aa17.31■□□□□ 0.36
USP39-204ENST00000409766 NANOS1Q8WY41 292 aaKnown RBP17.31■□□□□ 0.36
USP39-204ENST00000409766 POM121Q96HA1 1249 aa17.31■□□□□ 0.36
USP39-204ENST00000409766 CITED4Q96RK1 184 aa17.31■□□□□ 0.36
USP39-204ENST00000409766 GLRX2Q9NS18 164 aa17.31■□□□□ 0.36
USP39-204ENST00000409766 PDCD6O75340 191 aa17.31■□□□□ 0.36
USP39-204ENST00000409766 RP2O75695 350 aa17.31■□□□□ 0.36
USP39-204ENST00000409766 SLC25A4P12235 298 aa17.31■□□□□ 0.36
USP39-204ENST00000409766 GPM6AP51674 278 aa17.31■□□□□ 0.36
USP39-204ENST00000409766 ZNF660Q6AZW8 331 aaPredicted RBP17.31■□□□□ 0.36
USP39-204ENST00000409766 C11orf87Q6NUJ2 197 aa17.31■□□□□ 0.36
USP39-204ENST00000409766 MDP1Q86V88 176 aa17.31■□□□□ 0.36
USP39-204ENST00000409766 COMMD9Q9P000 198 aa17.31■□□□□ 0.36
USP39-204ENST00000409766 MUC6Q6W4X9 2439 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms