RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 HSD17B11Q8NBQ5 300 aa11.73□□□□□ -0.53
COL6A2-204ENST00000409416 OR2M3Q8NG83 312 aa11.73□□□□□ -0.53
COL6A2-204ENST00000409416 STOML3Q8TAV4 291 aa11.73□□□□□ -0.53
COL6A2-204ENST00000409416 DNTTIP1Q9H147 329 aa11.73□□□□□ -0.53
COL6A2-204ENST00000409416 OR14J1Q9UGF5 321 aa11.73□□□□□ -0.53
COL6A2-204ENST00000409416 DMXL2Q8TDJ6 3036 aa11.73□□□□□ -0.53
COL6A2-204ENST00000409416 C5orf49A4QMS7 147 aa11.73□□□□□ -0.53
COL6A2-204ENST00000409416 ARGFXA6NJG6 315 aa11.73□□□□□ -0.53
COL6A2-204ENST00000409416 SRSF10O75494 262 aaKnown RBP11.73□□□□□ -0.53
COL6A2-204ENST00000409416 ACTL6AO96019 429 aa11.73□□□□□ -0.53
COL6A2-204ENST00000409416 ISG15P05161 165 aa11.73□□□□□ -0.53
COL6A2-204ENST00000409416 CLINT1Q14677 625 aa11.73□□□□□ -0.53
COL6A2-204ENST00000409416 ALKBH6Q3KRA9 238 aa11.73□□□□□ -0.53
COL6A2-204ENST00000409416 TMEM128Q5BJH2 165 aa11.73□□□□□ -0.53
COL6A2-204ENST00000409416 SLC25A26Q70HW3 274 aa11.73□□□□□ -0.53
COL6A2-204ENST00000409416 SVBPQ8N300 66 aa11.73□□□□□ -0.53
COL6A2-204ENST00000409416 SAP25Q8TEE9 199 aa11.73□□□□□ -0.53
COL6A2-204ENST00000409416 C5orf66Q9H5L9 145 aa11.73□□□□□ -0.53
COL6A2-204ENST00000409416 TMEM218A2RU14 115 aa11.73□□□□□ -0.53
COL6A2-204ENST00000409416 HSPA12AO43301 675 aa11.73□□□□□ -0.53
COL6A2-204ENST00000409416 NDUFA2O43678 99 aa11.73□□□□□ -0.53
COL6A2-204ENST00000409416 LRP3O75074 770 aa11.73□□□□□ -0.53
COL6A2-204ENST00000409416 MRPL33O75394 65 aaKnown RBP11.73□□□□□ -0.53
COL6A2-204ENST00000409416 MSR1P21757 451 aa11.73□□□□□ -0.53
COL6A2-204ENST00000409416 DCAF12Q5T6F0 453 aa11.73□□□□□ -0.53
COL6A2-204ENST00000409416 DRAM2Q6UX65 266 aa11.73□□□□□ -0.53
COL6A2-204ENST00000409416 FBXL14Q8N1E6 418 aa11.73□□□□□ -0.53
COL6A2-204ENST00000409416 PIK3IP1Q96FE7 263 aa11.73□□□□□ -0.53
COL6A2-204ENST00000409416 BIN3Q9NQY0 253 aa11.73□□□□□ -0.53
COL6A2-204ENST00000409416 C14orf166Q9Y224 244 aaKnown RBP11.73□□□□□ -0.53
COL6A2-204ENST00000409416 K7ESF4 209 aa11.72□□□□□ -0.53
COL6A2-204ENST00000409416 NFYBP25208 207 aa11.72□□□□□ -0.53
COL6A2-204ENST00000409416 CAV2P51636 162 aa11.72□□□□□ -0.53
COL6A2-204ENST00000409416 CCL11P51671 97 aa11.72□□□□□ -0.53
COL6A2-204ENST00000409416 SMCO1Q147U7 214 aa11.72□□□□□ -0.53
COL6A2-204ENST00000409416 RNF141Q8WVD5 230 aa11.72□□□□□ -0.53
COL6A2-204ENST00000409416 OR10C1Q96KK4 312 aa11.72□□□□□ -0.53
COL6A2-204ENST00000409416 EDEM2Q9BV94 578 aa11.72□□□□□ -0.53
COL6A2-204ENST00000409416 SRXN1Q9BYN0 137 aa11.72□□□□□ -0.53
COL6A2-204ENST00000409416 FLVCR1Q9Y5Y0 555 aa11.72□□□□□ -0.53
COL6A2-204ENST00000409416 H0YIZ8 118 aa11.72□□□□□ -0.53
COL6A2-204ENST00000409416 SLC25A4P12235 298 aa11.72□□□□□ -0.53
COL6A2-204ENST00000409416 TAS2R31P59538 309 aa11.72□□□□□ -0.53
COL6A2-204ENST00000409416 SLC35A1P78382 337 aa11.72□□□□□ -0.53
COL6A2-204ENST00000409416 ZXDAP98168 799 aa11.72□□□□□ -0.53
COL6A2-204ENST00000409416 ANKRD55Q3KP44 614 aa11.72□□□□□ -0.53
COL6A2-204ENST00000409416 THEM4Q5T1C6 240 aa11.72□□□□□ -0.53
COL6A2-204ENST00000409416 VHLLQ6RSH7 139 aa11.72□□□□□ -0.53
COL6A2-204ENST00000409416 OR56B1Q8NGI3 324 aa11.72□□□□□ -0.53
COL6A2-204ENST00000409416 SLAMF9Q96A28 289 aa11.72□□□□□ -0.53
COL6A2-204ENST00000409416 TLNRD1Q9H1K6 362 aa11.72□□□□□ -0.53
COL6A2-204ENST00000409416 FAM86C1Q9NVL1 165 aa11.72□□□□□ -0.53
COL6A2-204ENST00000409416 NOSIPQ9Y314 301 aaKnown RBP11.72□□□□□ -0.53
COL6A2-204ENST00000409416 TNRC18O15417 2968 aaPredicted RBP11.72□□□□□ -0.53
COL6A2-204ENST00000409416 MSX1P28360 303 aa11.72□□□□□ -0.53
COL6A2-204ENST00000409416 CYB561P49447 251 aa11.72□□□□□ -0.53
COL6A2-204ENST00000409416 ZNF345Q14585 488 aa11.72□□□□□ -0.53
COL6A2-204ENST00000409416 IAH1Q2TAA2 248 aaPredicted RBP11.72□□□□□ -0.53
COL6A2-204ENST00000409416 Q3ZCU0 254 aa11.72□□□□□ -0.53
COL6A2-204ENST00000409416 PGAP1Q75T13 922 aa11.72□□□□□ -0.53
COL6A2-204ENST00000409416 OR10D3Q8NH80 312 aa11.72□□□□□ -0.53
COL6A2-204ENST00000409416 NUBPLQ8TB37 319 aa11.72□□□□□ -0.53
COL6A2-204ENST00000409416 MRGPRX4Q96LA9 322 aa11.72□□□□□ -0.53
COL6A2-204ENST00000409416 OXGR1Q96P68 337 aa11.72□□□□□ -0.53
COL6A2-204ENST00000409416 LRP4O75096 1905 aa11.71□□□□□ -0.53
COL6A2-204ENST00000409416 A6NLC8 198 aa11.71□□□□□ -0.53
COL6A2-204ENST00000409416 GNRHRP30968 328 aa11.71□□□□□ -0.53
COL6A2-204ENST00000409416 TMEM50BP56557 158 aa11.71□□□□□ -0.53
COL6A2-204ENST00000409416 RPL7L1Q6DKI1 246 aaKnown RBP11.71□□□□□ -0.53
COL6A2-204ENST00000409416 DEGS2Q6QHC5 323 aa11.71□□□□□ -0.53
COL6A2-204ENST00000409416 C5orf46Q6UWT4 87 aa11.71□□□□□ -0.53
COL6A2-204ENST00000409416 LDLRAD3Q86YD5 345 aa11.71□□□□□ -0.53
COL6A2-204ENST00000409416 MAML2Q8IZL2 1156 aaPredicted RBP11.71□□□□□ -0.53
COL6A2-204ENST00000409416 C17orf78Q8N4C9 275 aa11.71□□□□□ -0.53
COL6A2-204ENST00000409416 PLPP5Q8NEB5 264 aa11.71□□□□□ -0.53
COL6A2-204ENST00000409416 IL17BQ9UHF5 180 aa11.71□□□□□ -0.53
COL6A2-204ENST00000409416 TRAF3IP2O43734 574 aaPredicted RBP11.71□□□□□ -0.54
COL6A2-204ENST00000409416 CHRM2P08172 466 aa11.71□□□□□ -0.54
COL6A2-204ENST00000409416 CYCSP99999 105 aaKnown RBP11.71□□□□□ -0.54
COL6A2-204ENST00000409416 TMEM164Q5U3C3 297 aa11.71□□□□□ -0.54
COL6A2-204ENST00000409416 UFSP2Q9NUQ7 469 aa11.71□□□□□ -0.54
COL6A2-204ENST00000409416 B3GAT1Q9P2W7 334 aa11.71□□□□□ -0.54
COL6A2-204ENST00000409416 ATG2AQ2TAZ0 1938 aa11.7□□□□□ -0.54
COL6A2-204ENST00000409416 IGHMP01871 453 aa11.7□□□□□ -0.54
COL6A2-204ENST00000409416 CD80P33681 288 aa11.7□□□□□ -0.54
COL6A2-204ENST00000409416 HOXA1P49639 335 aaPredicted RBP11.7□□□□□ -0.54
COL6A2-204ENST00000409416 ACER2Q5QJU3 275 aa11.7□□□□□ -0.54
COL6A2-204ENST00000409416 HOGA1Q86XE5 327 aa11.7□□□□□ -0.54
COL6A2-204ENST00000409416 DTWD2Q8NBA8 298 aa11.7□□□□□ -0.54
COL6A2-204ENST00000409416 SEMA6DQ8NFY4 1073 aa11.7□□□□□ -0.54
COL6A2-204ENST00000409416 OR13G1Q8NGZ3 307 aa11.7□□□□□ -0.54
COL6A2-204ENST00000409416 SPTSSAQ969W0 71 aa11.7□□□□□ -0.54
COL6A2-204ENST00000409416 ZNF700Q9H0M5 742 aa11.7□□□□□ -0.54
COL6A2-204ENST00000409416 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.7□□□□□ -0.54
COL6A2-204ENST00000409416 GPR27Q9NS67 375 aa11.7□□□□□ -0.54
COL6A2-204ENST00000409416 ANKRD11Q6UB99 2663 aaPredicted RBP11.7□□□□□ -0.54
COL6A2-204ENST00000409416 TMEM131Q92545 1883 aa11.7□□□□□ -0.54
COL6A2-204ENST00000409416 ZNF44P15621 663 aa11.7□□□□□ -0.54
COL6A2-204ENST00000409416 MAGEA5P43359 124 aa11.7□□□□□ -0.54
COL6A2-204ENST00000409416 NPBWR1P48145 328 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms