RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 IGKV1-12A0A0C4DH73 117 aa17.24■□□□□ 0.35
VSX1-203ENST00000409285 hCG_1807616A0A1W2PRN6 198 aa17.24■□□□□ 0.35
VSX1-203ENST00000409285 SMIM30A4D0T7 59 aa17.24■□□□□ 0.35
VSX1-203ENST00000409285 NDUFS7O75251 213 aa17.24■□□□□ 0.35
VSX1-203ENST00000409285 ZNF780AO75290 641 aaPredicted RBP17.24■□□□□ 0.35
VSX1-203ENST00000409285 BPNT1O95861 308 aa17.24■□□□□ 0.35
VSX1-203ENST00000409285 PLATP00750 562 aa17.24■□□□□ 0.35
VSX1-203ENST00000409285 IGKV1D-12P01611 117 aa17.24■□□□□ 0.35
VSX1-203ENST00000409285 CAV3P56539 151 aa17.24■□□□□ 0.35
VSX1-203ENST00000409285 HNRNPA0Q13151 305 aaKnown RBP17.24■□□□□ 0.35
VSX1-203ENST00000409285 ELP2Q6IA86 826 aa17.24■□□□□ 0.35
VSX1-203ENST00000409285 C1QL2Q7Z5L3 287 aa17.24■□□□□ 0.35
VSX1-203ENST00000409285 GCSAMQ8N6F7 178 aa17.24■□□□□ 0.35
VSX1-203ENST00000409285 YIPF5Q969M3 257 aa17.24■□□□□ 0.35
VSX1-203ENST00000409285 KCTD12Q96CX2 325 aaKnown RBP17.24■□□□□ 0.35
VSX1-203ENST00000409285 CEP19Q96LK0 163 aa17.24■□□□□ 0.35
VSX1-203ENST00000409285 NKX3-1Q99801 234 aaPredicted RBP17.24■□□□□ 0.35
VSX1-203ENST00000409285 BARHL1Q9BZE3 327 aa17.24■□□□□ 0.35
VSX1-203ENST00000409285 CCDC59Q9P031 241 aaKnown RBP17.24■□□□□ 0.35
VSX1-203ENST00000409285 FBLN5Q9UBX5 448 aa17.24■□□□□ 0.35
VSX1-203ENST00000409285 TMEM178BH3BS89 294 aa17.23■□□□□ 0.35
VSX1-203ENST00000409285 ANGPTL7O43827 346 aa17.23■□□□□ 0.35
VSX1-203ENST00000409285 IRF2P14316 349 aa17.23■□□□□ 0.35
VSX1-203ENST00000409285 RORCP51449 518 aa17.23■□□□□ 0.35
VSX1-203ENST00000409285 BMXP51813 675 aa17.23■□□□□ 0.35
VSX1-203ENST00000409285 ATP5J2P56134 94 aa17.23■□□□□ 0.35
VSX1-203ENST00000409285 DYNC1I2Q13409 638 aaKnown RBP17.23■□□□□ 0.35
VSX1-203ENST00000409285 GPR176Q14439 515 aa17.23■□□□□ 0.35
VSX1-203ENST00000409285 DGUOKQ16854 277 aa17.23■□□□□ 0.35
VSX1-203ENST00000409285 DEFB113Q30KQ7 82 aa17.23■□□□□ 0.35
VSX1-203ENST00000409285 GLIPR1L1Q6UWM5 242 aa17.23■□□□□ 0.35
VSX1-203ENST00000409285 LRRC29Q8WV35 223 aa17.23■□□□□ 0.35
VSX1-203ENST00000409285 CCL17Q92583 94 aa17.23■□□□□ 0.35
VSX1-203ENST00000409285 SLAMF9Q96A28 289 aa17.23■□□□□ 0.35
VSX1-203ENST00000409285 S100A13Q99584 98 aa17.23■□□□□ 0.35
VSX1-203ENST00000409285 CHODLQ9H9P2 273 aa17.23■□□□□ 0.35
VSX1-203ENST00000409285 LIN7BQ9HAP6 207 aa17.23■□□□□ 0.35
VSX1-203ENST00000409285 RASL12Q9NYN1 266 aa17.23■□□□□ 0.35
VSX1-203ENST00000409285 CACNG2Q9Y698 323 aa17.23■□□□□ 0.35
VSX1-203ENST00000409285 TRAPPC2LH3BP13 241 aa17.22■□□□□ 0.35
VSX1-203ENST00000409285 CDC14BO60729 498 aa17.22■□□□□ 0.35
VSX1-203ENST00000409285 LY6HO94772 140 aa17.22■□□□□ 0.35
VSX1-203ENST00000409285 COL8A2P25067 703 aa17.22■□□□□ 0.35
VSX1-203ENST00000409285 CNPY1Q3B7I2 92 aa17.22■□□□□ 0.35
VSX1-203ENST00000409285 HES5Q5TA89 166 aa17.22■□□□□ 0.35
VSX1-203ENST00000409285 FAM90A1Q86YD7 464 aa17.22■□□□□ 0.35
VSX1-203ENST00000409285 TGIF2LYQ8IUE0 185 aa17.22■□□□□ 0.35
VSX1-203ENST00000409285 FAM3DQ96BQ1 224 aa17.22■□□□□ 0.35
VSX1-203ENST00000409285 MRPS24Q96EL2 167 aaKnown RBP17.22■□□□□ 0.35
VSX1-203ENST00000409285 METTL9Q9H1A3 318 aa17.22■□□□□ 0.35
VSX1-203ENST00000409285 PCDHB16Q9NRJ7 776 aa17.22■□□□□ 0.35
VSX1-203ENST00000409285 DAPK2Q9UIK4 370 aa17.22■□□□□ 0.35
VSX1-203ENST00000409285 DOCK11Q5JSL3 2073 aa17.21■□□□□ 0.35
VSX1-203ENST00000409285 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.21■□□□□ 0.35
VSX1-203ENST00000409285 AKR7A2O43488 359 aa17.21■□□□□ 0.35
VSX1-203ENST00000409285 SFTPBP07988 381 aa17.21■□□□□ 0.35
VSX1-203ENST00000409285 CSF3P09919 207 aa17.21■□□□□ 0.35
VSX1-203ENST00000409285 CALCBP10092 127 aa17.21■□□□□ 0.35
VSX1-203ENST00000409285 ARSBP15848 533 aa17.21■□□□□ 0.35
VSX1-203ENST00000409285 QRFPP83859 136 aa17.21■□□□□ 0.35
VSX1-203ENST00000409285 RSU1Q15404 277 aa17.21■□□□□ 0.35
VSX1-203ENST00000409285 CDH24Q86UP0 819 aa17.21■□□□□ 0.35
VSX1-203ENST00000409285 CST11Q9H112 138 aa17.21■□□□□ 0.35
VSX1-203ENST00000409285 ABRACLQ9P1F3 81 aa17.21■□□□□ 0.35
VSX1-203ENST00000409285 LDLRAD4O15165 306 aa17.2■□□□□ 0.34
VSX1-203ENST00000409285 CYB5R3P00387 301 aaPredicted RBP17.2■□□□□ 0.34
VSX1-203ENST00000409285 SLC2A2P11168 524 aaPredicted RBP17.2■□□□□ 0.34
VSX1-203ENST00000409285 BCL3P20749 454 aa17.2■□□□□ 0.34
VSX1-203ENST00000409285 SOX6P35712 828 aa17.2■□□□□ 0.34
VSX1-203ENST00000409285 NPBWR2P48146 333 aa17.2■□□□□ 0.34
VSX1-203ENST00000409285 TMEM33P57088 247 aa17.2■□□□□ 0.34
VSX1-203ENST00000409285 SMIM21Q3B7S5 101 aa17.2■□□□□ 0.34
VSX1-203ENST00000409285 NHLRC3Q5JS37 347 aa17.2■□□□□ 0.34
VSX1-203ENST00000409285 TEX36Q5VZQ5 186 aa17.2■□□□□ 0.34
VSX1-203ENST00000409285 OR2W3Q7Z3T1 314 aa17.2■□□□□ 0.34
VSX1-203ENST00000409285 AP3S1Q92572 193 aa17.2■□□□□ 0.34
VSX1-203ENST00000409285 PTX4Q96A99 478 aa17.2■□□□□ 0.34
VSX1-203ENST00000409285 DCAF16Q9NXF7 216 aa17.2■□□□□ 0.34
VSX1-203ENST00000409285 PRRC2AP48634 2157 aaKnown RBP17.2■□□□□ 0.34
VSX1-203ENST00000409285 TMEM14DPA8MWL7 114 aa17.19■□□□□ 0.34
VSX1-203ENST00000409285 CLDN25C9JDP6 229 aa17.19■□□□□ 0.34
VSX1-203ENST00000409285 F8VVB4 439 aa17.19■□□□□ 0.34
VSX1-203ENST00000409285 F8VWA3 439 aa17.19■□□□□ 0.34
VSX1-203ENST00000409285 VSIG8P0DPA2 414 aa17.19■□□□□ 0.34
VSX1-203ENST00000409285 MUC1P15941 1255 aaPredicted RBP17.19■□□□□ 0.34
VSX1-203ENST00000409285 ZNF182P17025 639 aaPredicted RBP17.19■□□□□ 0.34
VSX1-203ENST00000409285 EGR1P18146 543 aa17.19■□□□□ 0.34
VSX1-203ENST00000409285 GLRA1P23415 457 aa17.19■□□□□ 0.34
VSX1-203ENST00000409285 GIFP27352 417 aa17.19■□□□□ 0.34
VSX1-203ENST00000409285 CLDN12P56749 244 aa17.19■□□□□ 0.34
VSX1-203ENST00000409285 FGF12P61328 243 aa17.19■□□□□ 0.34
VSX1-203ENST00000409285 P2RY14Q15391 338 aa17.19■□□□□ 0.34
VSX1-203ENST00000409285 SLC22A6Q4U2R8 563 aa17.19■□□□□ 0.34
VSX1-203ENST00000409285 IDNKQ5T6J7 187 aa17.19■□□□□ 0.34
VSX1-203ENST00000409285 DNM1P46Q6ZS02 220 aa17.19■□□□□ 0.34
VSX1-203ENST00000409285 CCDC168Q8NDH2 2452 aa17.19■□□□□ 0.34
VSX1-203ENST00000409285 OR51D1Q8NGF3 324 aa17.19■□□□□ 0.34
VSX1-203ENST00000409285 OR51T1Q8NGJ9 327 aa17.19■□□□□ 0.34
VSX1-203ENST00000409285 KCNG3Q8TAE7 436 aa17.19■□□□□ 0.34
VSX1-203ENST00000409285 ACOT12Q8WYK0 555 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms