RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 TRAPPC2LH3BP13 241 aa10.98□□□□□ -0.65
LIMS2-203ENST00000409254 TMEM178BH3BS89 294 aa10.98□□□□□ -0.65
LIMS2-203ENST00000409254 CDIPTO14735 213 aa10.98□□□□□ -0.65
LIMS2-203ENST00000409254 CDRT1O95170 752 aa10.98□□□□□ -0.65
LIMS2-203ENST00000409254 GRPP07492 148 aa10.98□□□□□ -0.65
LIMS2-203ENST00000409254 FAM90A15PP0C7V4 464 aa10.98□□□□□ -0.65
LIMS2-203ENST00000409254 FAM90A13PP0C7W8 464 aa10.98□□□□□ -0.65
LIMS2-203ENST00000409254 FAM90A14PP0C7W9 464 aa10.98□□□□□ -0.65
LIMS2-203ENST00000409254 FAM90A24PP0C7X0 464 aa10.98□□□□□ -0.65
LIMS2-203ENST00000409254 CALCBP10092 127 aa10.98□□□□□ -0.65
LIMS2-203ENST00000409254 SOX6P35712 828 aa10.98□□□□□ -0.65
LIMS2-203ENST00000409254 CDKN1AP38936 164 aa10.98□□□□□ -0.65
LIMS2-203ENST00000409254 SERPINB10P48595 397 aa10.98□□□□□ -0.65
LIMS2-203ENST00000409254 ATP5J2P56134 94 aa10.98□□□□□ -0.65
LIMS2-203ENST00000409254 MPPED2Q15777 294 aa10.98□□□□□ -0.65
LIMS2-203ENST00000409254 RAB11BQ15907 218 aa10.98□□□□□ -0.65
LIMS2-203ENST00000409254 SPIN3Q5JUX0 258 aa10.98□□□□□ -0.65
LIMS2-203ENST00000409254 PRAMEF6Q5VXH4 476 aa10.98□□□□□ -0.65
LIMS2-203ENST00000409254 SLC25A26Q70HW3 274 aa10.98□□□□□ -0.65
LIMS2-203ENST00000409254 PEG10Q86TG7 708 aaKnown RBP10.98□□□□□ -0.65
LIMS2-203ENST00000409254 MOGAT3Q86VF5 341 aa10.98□□□□□ -0.65
LIMS2-203ENST00000409254 ZCCHC24Q8N2G6 241 aaKnown RBP10.98□□□□□ -0.65
LIMS2-203ENST00000409254 MUC20Q8N307 709 aaPredicted RBP10.98□□□□□ -0.65
LIMS2-203ENST00000409254 OR51T1Q8NGJ9 327 aa10.98□□□□□ -0.65
LIMS2-203ENST00000409254 OR51F2Q8NH61 342 aa10.98□□□□□ -0.65
LIMS2-203ENST00000409254 TNFAIP8L1Q8WVP5 186 aa10.98□□□□□ -0.65
LIMS2-203ENST00000409254 ORAI1Q96D31 301 aa10.98□□□□□ -0.65
LIMS2-203ENST00000409254 TIMD4Q96H15 378 aa10.98□□□□□ -0.65
LIMS2-203ENST00000409254 GFI1Q99684 422 aa10.98□□□□□ -0.65
LIMS2-203ENST00000409254 METTL9Q9H1A3 318 aa10.98□□□□□ -0.65
LIMS2-203ENST00000409254 CNTD2Q9H8S5 307 aa10.98□□□□□ -0.65
LIMS2-203ENST00000409254 PLGRKTQ9HBL7 147 aa10.98□□□□□ -0.65
LIMS2-203ENST00000409254 SMURF1Q9HCE7 757 aa10.98□□□□□ -0.65
LIMS2-203ENST00000409254 C1orf123Q9NWV4 160 aa10.98□□□□□ -0.65
LIMS2-203ENST00000409254 ABRACLQ9P1F3 81 aa10.98□□□□□ -0.65
LIMS2-203ENST00000409254 MRPS28Q9Y2Q9 187 aaKnown RBP10.98□□□□□ -0.65
LIMS2-203ENST00000409254 ETV7Q9Y603 341 aa10.98□□□□□ -0.65
LIMS2-203ENST00000409254 A3GALT2U3KPV4 340 aa10.98□□□□□ -0.65
LIMS2-203ENST00000409254 VPS13CQ709C8 3753 aa10.97□□□□□ -0.65
LIMS2-203ENST00000409254 hCG_1807616A0A1W2PRN6 198 aa10.97□□□□□ -0.65
LIMS2-203ENST00000409254 AKR7A2O43488 359 aa10.97□□□□□ -0.65
LIMS2-203ENST00000409254 NDUFA2O43678 99 aa10.97□□□□□ -0.65
LIMS2-203ENST00000409254 SCGNO76038 276 aa10.97□□□□□ -0.65
LIMS2-203ENST00000409254 IGHV4-39P01824 125 aa10.97□□□□□ -0.65
LIMS2-203ENST00000409254 TMEM225BP0DP42 221 aa10.97□□□□□ -0.65
LIMS2-203ENST00000409254 RAB6AP20340 208 aa10.97□□□□□ -0.65
LIMS2-203ENST00000409254 POU3F4P49335 361 aa10.97□□□□□ -0.65
LIMS2-203ENST00000409254 PDLIM4P50479 330 aa10.97□□□□□ -0.65
LIMS2-203ENST00000409254 RORCP51449 518 aa10.97□□□□□ -0.65
LIMS2-203ENST00000409254 KRTAP10-9P60411 292 aa10.97□□□□□ -0.65
LIMS2-203ENST00000409254 FGF12P61328 243 aa10.97□□□□□ -0.65
LIMS2-203ENST00000409254 IL13RA2Q14627 380 aa10.97□□□□□ -0.65
LIMS2-203ENST00000409254 TEX36Q5VZQ5 186 aa10.97□□□□□ -0.65
LIMS2-203ENST00000409254 AWAT2Q6E213 333 aa10.97□□□□□ -0.65
LIMS2-203ENST00000409254 DNM1P46Q6ZS02 220 aa10.97□□□□□ -0.65
LIMS2-203ENST00000409254 NR2C2APQ86WQ0 139 aa10.97□□□□□ -0.65
LIMS2-203ENST00000409254 GCSAMQ8N6F7 178 aa10.97□□□□□ -0.65
LIMS2-203ENST00000409254 KCNG3Q8TAE7 436 aa10.97□□□□□ -0.65
LIMS2-203ENST00000409254 DYNC2LI1Q8TCX1 351 aa10.97□□□□□ -0.65
LIMS2-203ENST00000409254 C1orf147Q96MC9 270 aaPredicted RBP10.97□□□□□ -0.65
LIMS2-203ENST00000409254 CMTM3Q96MX0 182 aa10.97□□□□□ -0.65
LIMS2-203ENST00000409254 SPACA5Q96QH8 159 aa10.97□□□□□ -0.65
LIMS2-203ENST00000409254 AK6Q9Y3D8 172 aaKnown RBP10.97□□□□□ -0.65
LIMS2-203ENST00000409254 WNK2Q9Y3S1 2297 aa10.97□□□□□ -0.65
LIMS2-203ENST00000409254 MALRD1Q5VYJ5 2156 aa10.96□□□□□ -0.65
LIMS2-203ENST00000409254 TRAV38-1A0A0B4J264 116 aa10.96□□□□□ -0.65
LIMS2-203ENST00000409254 CCDC160A6NGH7 325 aa10.96□□□□□ -0.65
LIMS2-203ENST00000409254 KNG1P01042 644 aa10.96□□□□□ -0.65
LIMS2-203ENST00000409254 CSTBP04080 98 aaKnown RBP10.96□□□□□ -0.65
LIMS2-203ENST00000409254 ARSBP15848 533 aa10.96□□□□□ -0.65
LIMS2-203ENST00000409254 RPS19P39019 145 aaKnown RBP10.96□□□□□ -0.65
LIMS2-203ENST00000409254 OR3A4PP47883 348 aa10.96□□□□□ -0.65
LIMS2-203ENST00000409254 LSM3P62310 102 aaKnown RBP10.96□□□□□ -0.65
LIMS2-203ENST00000409254 ZNF146Q15072 292 aa10.96□□□□□ -0.65
LIMS2-203ENST00000409254 RSU1Q15404 277 aa10.96□□□□□ -0.65
LIMS2-203ENST00000409254 C11orf91Q3C1V1 193 aa10.96□□□□□ -0.65
LIMS2-203ENST00000409254 TMEM155Q4W5P6 130 aa10.96□□□□□ -0.65
LIMS2-203ENST00000409254 SHEQ5VZ18 495 aa10.96□□□□□ -0.65
LIMS2-203ENST00000409254 HIST2H2BCQ6DN03 193 aa10.96□□□□□ -0.65
LIMS2-203ENST00000409254 CLEC2AQ6UVW9 174 aa10.96□□□□□ -0.65
LIMS2-203ENST00000409254 ANGPTL5Q86XS5 388 aa10.96□□□□□ -0.65
LIMS2-203ENST00000409254 OR4D6Q8NGJ1 314 aa10.96□□□□□ -0.65
LIMS2-203ENST00000409254 LRRC29Q8WV35 223 aa10.96□□□□□ -0.65
LIMS2-203ENST00000409254 RAB1CQ92928 201 aa10.96□□□□□ -0.65
LIMS2-203ENST00000409254 SLC25A28Q96A46 364 aa10.96□□□□□ -0.65
LIMS2-203ENST00000409254 FOXC2Q99958 501 aa10.96□□□□□ -0.65
LIMS2-203ENST00000409254 LIME1Q9H400 295 aa10.96□□□□□ -0.65
LIMS2-203ENST00000409254 RNF167Q9H6Y7 350 aa10.96□□□□□ -0.65
LIMS2-203ENST00000409254 IFT22Q9H7X7 185 aa10.96□□□□□ -0.65
LIMS2-203ENST00000409254 LIN7BQ9HAP6 207 aa10.96□□□□□ -0.65
LIMS2-203ENST00000409254 UFSP2Q9NUQ7 469 aa10.96□□□□□ -0.65
LIMS2-203ENST00000409254 MTCH1Q9NZJ7 389 aa10.96□□□□□ -0.65
LIMS2-203ENST00000409254 FLNAP21333 2647 aaKnown RBP10.96□□□□□ -0.66
LIMS2-203ENST00000409254 OOEPA6NGQ2 149 aa10.95□□□□□ -0.66
LIMS2-203ENST00000409254 TMEM14DPA8MWL7 114 aa10.95□□□□□ -0.66
LIMS2-203ENST00000409254 LGALS8O00214 317 aa10.95□□□□□ -0.66
LIMS2-203ENST00000409254 LDLRAD4O15165 306 aa10.95□□□□□ -0.66
LIMS2-203ENST00000409254 SYNGR1O43759 233 aa10.95□□□□□ -0.66
LIMS2-203ENST00000409254 NXPH2O95156 264 aa10.95□□□□□ -0.66
LIMS2-203ENST00000409254 GTF2F2P13984 249 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms