RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 WDR25Q64LD2 544 aaPredicted RBP11.42□□□□□ -0.58
PTPRN-202ENST00000409251 SLC39A7Q92504 469 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 ZNF775Q96BV0 537 aaPredicted RBP11.42□□□□□ -0.58
PTPRN-202ENST00000409251 CTHRC1Q96CG8 243 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 NMNAT2Q9BZQ4 307 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 PLA2G2EQ9NZK7 142 aa11.42□□□□□ -0.58
PTPRN-202ENST00000409251 MEGF11A6BM72 1044 aa11.41□□□□□ -0.58
PTPRN-202ENST00000409251 LILRA5A6NI73 299 aa11.41□□□□□ -0.58
PTPRN-202ENST00000409251 F5H5K5 113 aa11.41□□□□□ -0.58
PTPRN-202ENST00000409251 APLNRP35414 380 aa11.41□□□□□ -0.58
PTPRN-202ENST00000409251 SULT1A2P50226 295 aa11.41□□□□□ -0.58
PTPRN-202ENST00000409251 DLK1P80370 383 aa11.41□□□□□ -0.58
PTPRN-202ENST00000409251 SAT2Q96F10 170 aaPredicted RBP11.41□□□□□ -0.58
PTPRN-202ENST00000409251 SEBOXQ9HB31 216 aaPredicted RBP11.41□□□□□ -0.58
PTPRN-202ENST00000409251 SDHAF3Q9NRP4 125 aa11.41□□□□□ -0.58
PTPRN-202ENST00000409251 GPR27Q9NS67 375 aa11.41□□□□□ -0.58
PTPRN-202ENST00000409251 GNG13Q9P2W3 67 aa11.41□□□□□ -0.58
PTPRN-202ENST00000409251 IL17BQ9UHF5 180 aa11.41□□□□□ -0.58
PTPRN-202ENST00000409251 DOCK11Q5JSL3 2073 aa11.41□□□□□ -0.58
PTPRN-202ENST00000409251 PRSS37A4D1T9 235 aa11.41□□□□□ -0.58
PTPRN-202ENST00000409251 NUDT21O43809 227 aaKnown RBP11.41□□□□□ -0.58
PTPRN-202ENST00000409251 UTS2O95399 124 aa11.41□□□□□ -0.58
PTPRN-202ENST00000409251 ZNF25P17030 456 aaPredicted RBP11.41□□□□□ -0.58
PTPRN-202ENST00000409251 ZNF684Q5T5D7 378 aa11.41□□□□□ -0.58
PTPRN-202ENST00000409251 ZNF283Q8N7M2 679 aa11.41□□□□□ -0.58
PTPRN-202ENST00000409251 Q8WTZ3 238 aa11.41□□□□□ -0.58
PTPRN-202ENST00000409251 LMF2Q9BU23 707 aaKnown RBP11.41□□□□□ -0.58
PTPRN-202ENST00000409251 WWTR1Q9GZV5 400 aa11.41□□□□□ -0.58
PTPRN-202ENST00000409251 DUSP15Q9H1R2 295 aaPredicted RBP11.41□□□□□ -0.58
PTPRN-202ENST00000409251 COPS7AQ9UBW8 275 aa11.41□□□□□ -0.58
PTPRN-202ENST00000409251 WIPF3A6NGB9 483 aa11.41□□□□□ -0.58
PTPRN-202ENST00000409251 NPIPB9F8W1W9 429 aa11.41□□□□□ -0.58
PTPRN-202ENST00000409251 HLA-HP01893 362 aa11.41□□□□□ -0.58
PTPRN-202ENST00000409251 EPHA1P21709 976 aa11.41□□□□□ -0.58
PTPRN-202ENST00000409251 CDX1P47902 265 aaPredicted RBP11.41□□□□□ -0.58
PTPRN-202ENST00000409251 GABRA4P48169 554 aa11.41□□□□□ -0.58
PTPRN-202ENST00000409251 EGR4Q05215 589 aa11.41□□□□□ -0.58
PTPRN-202ENST00000409251 EGR3Q06889 387 aa11.41□□□□□ -0.58
PTPRN-202ENST00000409251 PRAMEF20Q5VT98 475 aa11.41□□□□□ -0.58
PTPRN-202ENST00000409251 C6orf201Q7Z4U5 140 aa11.41□□□□□ -0.58
PTPRN-202ENST00000409251 CYB561D1Q8N8Q1 229 aa11.41□□□□□ -0.58
PTPRN-202ENST00000409251 ZDHHC22Q8N966 263 aa11.41□□□□□ -0.58
PTPRN-202ENST00000409251 TMEM230Q96A57 120 aa11.41□□□□□ -0.58
PTPRN-202ENST00000409251 R4GN57 208 aa11.41□□□□□ -0.58
PTPRN-202ENST00000409251 SLC31A2O15432 143 aa11.4□□□□□ -0.58
PTPRN-202ENST00000409251 ZNF708P17019 499 aa11.4□□□□□ -0.58
PTPRN-202ENST00000409251 SLC35A1P78382 337 aa11.4□□□□□ -0.58
PTPRN-202ENST00000409251 INSM1Q01101 510 aaPredicted RBP11.4□□□□□ -0.58
PTPRN-202ENST00000409251 HGFACQ04756 655 aa11.4□□□□□ -0.58
PTPRN-202ENST00000409251 FAM57BQ71RH2 274 aa11.4□□□□□ -0.58
PTPRN-202ENST00000409251 MRPL41Q8IXM3 137 aaKnown RBP11.4□□□□□ -0.58
PTPRN-202ENST00000409251 SLC22A24Q8N4F4 322 aa11.4□□□□□ -0.58
PTPRN-202ENST00000409251 OR5D14Q8NGL3 314 aa11.4□□□□□ -0.58
PTPRN-202ENST00000409251 OR52N5Q8NH56 324 aa11.4□□□□□ -0.58
PTPRN-202ENST00000409251 GTF3AQ92664 365 aaKnown RBP11.4□□□□□ -0.58
PTPRN-202ENST00000409251 SMIM8Q96KF7 97 aa11.4□□□□□ -0.58
PTPRN-202ENST00000409251 CCDC74BQ96LY2 380 aa11.4□□□□□ -0.58
PTPRN-202ENST00000409251 NMES1Q9C002 83 aa11.4□□□□□ -0.58
PTPRN-202ENST00000409251 TMEM100Q9NV29 134 aa11.4□□□□□ -0.58
PTPRN-202ENST00000409251 LRFN1Q9P244 771 aa11.4□□□□□ -0.58
PTPRN-202ENST00000409251 CHD3Q12873 2000 aaKnown RBP11.4□□□□□ -0.58
PTPRN-202ENST00000409251 FER1L5A0AVI2 2057 aa11.4□□□□□ -0.58
PTPRN-202ENST00000409251 DCHS1Q96JQ0 3298 aa11.4□□□□□ -0.58
PTPRN-202ENST00000409251 OR5H15A6NDH6 313 aa11.4□□□□□ -0.58
PTPRN-202ENST00000409251 OR5H1A6NKK0 313 aa11.4□□□□□ -0.58
PTPRN-202ENST00000409251 F8VVB4 439 aa11.4□□□□□ -0.58
PTPRN-202ENST00000409251 F8VWA3 439 aa11.4□□□□□ -0.58
PTPRN-202ENST00000409251 ANGPTL7O43827 346 aa11.4□□□□□ -0.58
PTPRN-202ENST00000409251 MBP02144 154 aa11.4□□□□□ -0.58
PTPRN-202ENST00000409251 CRABP1P29762 137 aa11.4□□□□□ -0.58
PTPRN-202ENST00000409251 RPL29P47914 159 aaKnown RBP11.4□□□□□ -0.58
PTPRN-202ENST00000409251 RPL23AP62750 156 aaKnown RBP11.4□□□□□ -0.58
PTPRN-202ENST00000409251 MRPS34P82930 218 aaKnown RBP11.4□□□□□ -0.58
PTPRN-202ENST00000409251 LCN15Q6UWW0 184 aa11.4□□□□□ -0.58
PTPRN-202ENST00000409251 LYZL2Q7Z4W2 148 aa11.4□□□□□ -0.58
PTPRN-202ENST00000409251 ZNF429Q86V71 674 aa11.4□□□□□ -0.58
PTPRN-202ENST00000409251 ZNF440Q8IYI8 595 aa11.4□□□□□ -0.58
PTPRN-202ENST00000409251 LIN37Q96GY3 246 aaPredicted RBP11.4□□□□□ -0.58
PTPRN-202ENST00000409251 NIPSNAP3BQ9BS92 247 aa11.4□□□□□ -0.58
PTPRN-202ENST00000409251 SLC26A1Q9H2B4 701 aa11.4□□□□□ -0.58
PTPRN-202ENST00000409251 PLEKHJ1Q9NW61 149 aa11.4□□□□□ -0.58
PTPRN-202ENST00000409251 AK3Q9UIJ7 227 aa11.4□□□□□ -0.58
PTPRN-202ENST00000409251 B3GALT5Q9Y2C3 310 aa11.4□□□□□ -0.58
PTPRN-202ENST00000409251 TIMM10BQ9Y5J6 103 aa11.4□□□□□ -0.58
PTPRN-202ENST00000409251 A0A0U1RQK1 487 aa11.4□□□□□ -0.59
PTPRN-202ENST00000409251 FAM24AA6NFZ4 105 aa11.4□□□□□ -0.59
PTPRN-202ENST00000409251 RAD51DO75771 328 aa11.4□□□□□ -0.59
PTPRN-202ENST00000409251 SCGB1D1O95968 90 aa11.4□□□□□ -0.59
PTPRN-202ENST00000409251 CD5P06127 495 aa11.4□□□□□ -0.59
PTPRN-202ENST00000409251 TRGC1P0CF51 173 aa11.4□□□□□ -0.59
PTPRN-202ENST00000409251 GP1BBP13224 206 aa11.4□□□□□ -0.59
PTPRN-202ENST00000409251 SNCAP37840 140 aa11.4□□□□□ -0.59
PTPRN-202ENST00000409251 FOXK1P85037 733 aa11.4□□□□□ -0.59
PTPRN-202ENST00000409251 BTNL8Q6UX41 500 aa11.4□□□□□ -0.59
PTPRN-202ENST00000409251 ZNF705AQ6ZN79 300 aaPredicted RBP11.4□□□□□ -0.59
PTPRN-202ENST00000409251 MAMDC2Q7Z304 686 aaPredicted RBP11.4□□□□□ -0.59
PTPRN-202ENST00000409251 C9orf40Q8IXQ3 194 aa11.4□□□□□ -0.59
PTPRN-202ENST00000409251 OR13G1Q8NGZ3 307 aa11.4□□□□□ -0.59
PTPRN-202ENST00000409251 OPA3Q9H6K4 179 aa11.4□□□□□ -0.59
PTPRN-202ENST00000409251 CBLN4Q9NTU7 201 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms