RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 C19orf35Q6ZS72 473 aa15.73■□□□□ 0.11
SMPD4-202ENST00000409031 OR5AU1Q8NGC0 362 aa15.73■□□□□ 0.11
SMPD4-202ENST00000409031 OR3A4PP47883 348 aa15.73■□□□□ 0.11
SMPD4-202ENST00000409031 SUMO3P55854 103 aaPredicted RBP15.73■□□□□ 0.11
SMPD4-202ENST00000409031 FAM3BP58499 235 aaPredicted RBP15.73■□□□□ 0.11
SMPD4-202ENST00000409031 OR8G1Q15617 311 aa15.73■□□□□ 0.11
SMPD4-202ENST00000409031 DMRTC1Q5HYR2 192 aa15.73■□□□□ 0.11
SMPD4-202ENST00000409031 ABHD17BQ5VST6 288 aa15.73■□□□□ 0.11
SMPD4-202ENST00000409031 DPPA3Q6W0C5 159 aa15.73■□□□□ 0.11
SMPD4-202ENST00000409031 BATF2Q8N1L9 274 aa15.73■□□□□ 0.11
SMPD4-202ENST00000409031 ATP5SQ99766 215 aa15.73■□□□□ 0.11
SMPD4-202ENST00000409031 SLC26A1Q9H2B4 701 aa15.73■□□□□ 0.11
SMPD4-202ENST00000409031 NOSIPQ9Y314 301 aaKnown RBP15.73■□□□□ 0.11
SMPD4-202ENST00000409031 HCFC2Q9Y5Z7 792 aa15.73■□□□□ 0.11
SMPD4-202ENST00000409031 SLC38A11Q08AI6 406 aa15.73■□□□□ 0.11
SMPD4-202ENST00000409031 WDR73Q6P4I2 378 aa15.73■□□□□ 0.11
SMPD4-202ENST00000409031 DHRS11Q6UWP2 260 aa15.73■□□□□ 0.11
SMPD4-202ENST00000409031 DGAT2L6Q6ZPD8 337 aa15.73■□□□□ 0.11
SMPD4-202ENST00000409031 SLX1AQ9BQ83 275 aa15.73■□□□□ 0.11
SMPD4-202ENST00000409031 ANGPTL4Q9BY76 406 aa15.73■□□□□ 0.11
SMPD4-202ENST00000409031 CCDC88CQ9P219 2028 aa15.73■□□□□ 0.11
SMPD4-202ENST00000409031 OR10J4P0C629 311 aa15.72■□□□□ 0.11
SMPD4-202ENST00000409031 OTX2P32243 289 aa15.72■□□□□ 0.11
SMPD4-202ENST00000409031 DYNLT3P51808 116 aa15.72■□□□□ 0.11
SMPD4-202ENST00000409031 EWSR1Q01844 656 aaKnown RBP eCLIP15.72■□□□□ 0.11
SMPD4-202ENST00000409031 C17orf78Q8N4C9 275 aa15.72■□□□□ 0.11
SMPD4-202ENST00000409031 PHOSPHO2Q8TCD6 241 aa15.72■□□□□ 0.11
SMPD4-202ENST00000409031 FGF21Q9NSA1 209 aa15.72■□□□□ 0.11
SMPD4-202ENST00000409031 PTRH2Q9Y3E5 179 aaKnown RBP15.72■□□□□ 0.11
SMPD4-202ENST00000409031 A0A1W2PNR3 127 aa15.72■□□□□ 0.11
SMPD4-202ENST00000409031 SHISA3A0PJX4 238 aa15.72■□□□□ 0.11
SMPD4-202ENST00000409031 PRKNO60260 465 aaPredicted RBP15.72■□□□□ 0.11
SMPD4-202ENST00000409031 RPS15P62841 145 aaKnown RBP15.72■□□□□ 0.11
SMPD4-202ENST00000409031 SLC35E3Q7Z769 313 aa15.72■□□□□ 0.11
SMPD4-202ENST00000409031 ADAMTS17Q8TE56 1095 aa15.72■□□□□ 0.11
SMPD4-202ENST00000409031 PTPRFP10586 1907 aa15.72■□□□□ 0.11
SMPD4-202ENST00000409031 SOCS1O15524 211 aa15.72■□□□□ 0.11
SMPD4-202ENST00000409031 EFSO43281 561 aa15.72■□□□□ 0.11
SMPD4-202ENST00000409031 ZIC2O95409 532 aaPredicted RBP15.72■□□□□ 0.11
SMPD4-202ENST00000409031 ZGLP1P0C6A0 271 aa15.72■□□□□ 0.11
SMPD4-202ENST00000409031 FFAR4Q5NUL3 377 aa15.72■□□□□ 0.11
SMPD4-202ENST00000409031 OIT3Q8WWZ8 545 aa15.72■□□□□ 0.11
SMPD4-202ENST00000409031 THOC3Q96J01 351 aaKnown RBP15.72■□□□□ 0.11
SMPD4-202ENST00000409031 FAAP24Q9BTP7 215 aa15.72■□□□□ 0.11
SMPD4-202ENST00000409031 ELOVL1Q9BW60 279 aa15.72■□□□□ 0.11
SMPD4-202ENST00000409031 TPSD1Q9BZJ3 242 aa15.72■□□□□ 0.11
SMPD4-202ENST00000409031 OR5AC2Q9NZP5 309 aa15.72■□□□□ 0.11
SMPD4-202ENST00000409031 DHHO43323 396 aa15.72■□□□□ 0.11
SMPD4-202ENST00000409031 TMEM267Q0VDI3 215 aaPredicted RBP15.72■□□□□ 0.11
SMPD4-202ENST00000409031 MPV17LQ2QL34 196 aa15.72■□□□□ 0.11
SMPD4-202ENST00000409031 MANBALQ9NQG1 85 aa15.72■□□□□ 0.11
SMPD4-202ENST00000409031 CT45A6P0DMU7 189 aa15.71■□□□□ 0.11
SMPD4-202ENST00000409031 CT45A5P0DMU8 189 aa15.71■□□□□ 0.11
SMPD4-202ENST00000409031 CT45A7P0DMV0 189 aa15.71■□□□□ 0.11
SMPD4-202ENST00000409031 TAS2R60P59551 318 aa15.71■□□□□ 0.11
SMPD4-202ENST00000409031 CT45A1Q5HYN5 189 aa15.71■□□□□ 0.11
SMPD4-202ENST00000409031 MRGPREQ86SM8 312 aa15.71■□□□□ 0.11
SMPD4-202ENST00000409031 CT45A3Q8NHU0 189 aa15.71■□□□□ 0.11
SMPD4-202ENST00000409031 ABHD5Q8WTS1 349 aa15.71■□□□□ 0.11
SMPD4-202ENST00000409031 TBX15Q96SF7 602 aa15.71■□□□□ 0.11
SMPD4-202ENST00000409031 SOSTQ9BQB4 213 aa15.71■□□□□ 0.11
SMPD4-202ENST00000409031 KLK13Q9UKR3 277 aa15.71■□□□□ 0.11
SMPD4-202ENST00000409031 HS3ST3A1Q9Y663 406 aa15.71■□□□□ 0.11
SMPD4-202ENST00000409031 KCNAB3O43448 404 aa15.71■□□□□ 0.11
SMPD4-202ENST00000409031 SPRY1O43609 319 aaPredicted RBP15.71■□□□□ 0.11
SMPD4-202ENST00000409031 ATP6V0CP27449 155 aa15.71■□□□□ 0.11
SMPD4-202ENST00000409031 LPAR6P43657 344 aa15.71■□□□□ 0.11
SMPD4-202ENST00000409031 MRPS21P82921 87 aaKnown RBP15.71■□□□□ 0.11
SMPD4-202ENST00000409031 UNQ9370/PRO34162Q6UXP9 181 aa15.71■□□□□ 0.11
SMPD4-202ENST00000409031 NOXO1Q8NFA2 376 aa15.71■□□□□ 0.11
SMPD4-202ENST00000409031 STARD4Q96DR4 205 aa15.71■□□□□ 0.11
SMPD4-202ENST00000409031 PECRQ9BY49 303 aa15.71■□□□□ 0.11
SMPD4-202ENST00000409031 PIPOXQ9P0Z9 390 aa15.71■□□□□ 0.11
SMPD4-202ENST00000409031 MBD1Q9UIS9 605 aaPredicted RBP15.71■□□□□ 0.11
SMPD4-202ENST00000409031 PLRG1O43660 514 aaKnown RBP15.71■□□□□ 0.11
SMPD4-202ENST00000409031 OR7C2O60412 319 aa15.71■□□□□ 0.11
SMPD4-202ENST00000409031 TTRP02766 147 aa15.71■□□□□ 0.11
SMPD4-202ENST00000409031 VDAC1P21796 283 aa15.71■□□□□ 0.11
SMPD4-202ENST00000409031 CD38P28907 300 aa15.71■□□□□ 0.11
SMPD4-202ENST00000409031 FGF8P55075 233 aaPredicted RBP15.71■□□□□ 0.11
SMPD4-202ENST00000409031 FMODQ06828 376 aa15.71■□□□□ 0.11
SMPD4-202ENST00000409031 SHHQ15465 462 aa15.71■□□□□ 0.11
SMPD4-202ENST00000409031 VAX1Q5SQQ9 334 aa15.71■□□□□ 0.11
SMPD4-202ENST00000409031 ZNF547Q8IVP9 402 aa15.71■□□□□ 0.11
SMPD4-202ENST00000409031 DDA1Q9BW61 102 aa15.71■□□□□ 0.11
SMPD4-202ENST00000409031 CDK5RAP2Q96SN8 1893 aa15.71■□□□□ 0.11
SMPD4-202ENST00000409031 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.71■□□□□ 0.1
SMPD4-202ENST00000409031 A0A1B0GX78 115 aa15.71■□□□□ 0.1
SMPD4-202ENST00000409031 DHRS3O75911 302 aa15.71■□□□□ 0.1
SMPD4-202ENST00000409031 CYB5R3P00387 301 aaPredicted RBP15.71■□□□□ 0.1
SMPD4-202ENST00000409031 VSIG8P0DPA2 414 aa15.71■□□□□ 0.1
SMPD4-202ENST00000409031 NUFIP2Q7Z417 695 aaKnown RBP15.71■□□□□ 0.1
SMPD4-202ENST00000409031 ANKRD10Q9NXR5 420 aa15.71■□□□□ 0.1
SMPD4-202ENST00000409031 K7ERU9 68 aa15.7■□□□□ 0.1
SMPD4-202ENST00000409031 CTSVO60911 334 aa15.7■□□□□ 0.1
SMPD4-202ENST00000409031 MESTQ5EB52 335 aa15.7■□□□□ 0.1
SMPD4-202ENST00000409031 ZNF468Q5VIY5 522 aaPredicted RBP15.7■□□□□ 0.1
SMPD4-202ENST00000409031 POLDIP2Q9Y2S7 368 aa15.7■□□□□ 0.1
SMPD4-202ENST00000409031 PAM16Q9Y3D7 125 aa15.7■□□□□ 0.1
SMPD4-202ENST00000409031 TRBV5-5A0A0J9YX44 114 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms