RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 DSCAML1Q8TD84 2053 aa15.76■□□□□ 0.11
SMARCB1-204ENST00000407422 IGKV1-27A0A075B6S5 117 aa15.76■□□□□ 0.11
SMARCB1-204ENST00000407422 CLPSL1A2RUU4 121 aa15.76■□□□□ 0.11
SMARCB1-204ENST00000407422 H0YAE9 185 aa15.76■□□□□ 0.11
SMARCB1-204ENST00000407422 SLC1A7O00341 560 aa15.76■□□□□ 0.11
SMARCB1-204ENST00000407422 EI24O14681 340 aa15.76■□□□□ 0.11
SMARCB1-204ENST00000407422 ENTPD6O75354 484 aa15.76■□□□□ 0.11
SMARCB1-204ENST00000407422 RPL15P61313 204 aaKnown RBP15.76■□□□□ 0.11
SMARCB1-204ENST00000407422 ISL1P61371 349 aa15.76■□□□□ 0.11
SMARCB1-204ENST00000407422 TMED1Q13445 227 aa15.76■□□□□ 0.11
SMARCB1-204ENST00000407422 BLMHQ13867 455 aa15.76■□□□□ 0.11
SMARCB1-204ENST00000407422 ZIK1Q3SY52 487 aaPredicted RBP15.76■□□□□ 0.11
SMARCB1-204ENST00000407422 NCR3LG1Q68D85 454 aa15.76■□□□□ 0.11
SMARCB1-204ENST00000407422 OR4M1Q8NGD0 313 aa15.76■□□□□ 0.11
SMARCB1-204ENST00000407422 IMPAD1Q9NX62 359 aa15.76■□□□□ 0.11
SMARCB1-204ENST00000407422 F8VVB4 439 aa15.75■□□□□ 0.11
SMARCB1-204ENST00000407422 F8VWA3 439 aa15.75■□□□□ 0.11
SMARCB1-204ENST00000407422 KIR3DL2P43630 455 aa15.75■□□□□ 0.11
SMARCB1-204ENST00000407422 ERVFRD-1P60508 538 aa15.75■□□□□ 0.11
SMARCB1-204ENST00000407422 ERVK11-1P61568 191 aa15.75■□□□□ 0.11
SMARCB1-204ENST00000407422 RPL31P62899 125 aaKnown RBP15.75■□□□□ 0.11
SMARCB1-204ENST00000407422 TMEM200BQ69YZ2 307 aa15.75■□□□□ 0.11
SMARCB1-204ENST00000407422 C17orf107Q6ZR85 190 aa15.75■□□□□ 0.11
SMARCB1-204ENST00000407422 HRASLS5Q96KN8 279 aa15.75■□□□□ 0.11
SMARCB1-204ENST00000407422 INMTO95050 263 aa15.74■□□□□ 0.11
SMARCB1-204ENST00000407422 PAHP00439 452 aa15.74■□□□□ 0.11
SMARCB1-204ENST00000407422 KRTAP10-3P60369 221 aa15.74■□□□□ 0.11
SMARCB1-204ENST00000407422 IL24Q13007 206 aa15.74■□□□□ 0.11
SMARCB1-204ENST00000407422 MKXQ8IYA7 352 aa15.74■□□□□ 0.11
SMARCB1-204ENST00000407422 C11orf42Q8N5U0 333 aa15.74■□□□□ 0.11
SMARCB1-204ENST00000407422 OR5D13Q8NGL4 314 aa15.74■□□□□ 0.11
SMARCB1-204ENST00000407422 LINC01006Q8NI28 216 aa15.74■□□□□ 0.11
SMARCB1-204ENST00000407422 TRUB1Q8WWH5 349 aaKnown RBP15.74■□□□□ 0.11
SMARCB1-204ENST00000407422 ADI1Q9BV57 179 aa15.74■□□□□ 0.11
SMARCB1-204ENST00000407422 PKIBQ9C010 78 aa15.74■□□□□ 0.11
SMARCB1-204ENST00000407422 USE1Q9NZ43 259 aa15.74■□□□□ 0.11
SMARCB1-204ENST00000407422 MTCH1Q9NZJ7 389 aa15.74■□□□□ 0.11
SMARCB1-204ENST00000407422 AASSQ9UDR5 926 aa15.74■□□□□ 0.11
SMARCB1-204ENST00000407422 VPREB3Q9UKI3 123 aa15.74■□□□□ 0.11
SMARCB1-204ENST00000407422 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.74■□□□□ 0.11
SMARCB1-204ENST00000407422 SLC7A11Q9UPY5 501 aa15.74■□□□□ 0.11
SMARCB1-204ENST00000407422 LOC107986453A0A1B0GWG9 222 aa15.73■□□□□ 0.11
SMARCB1-204ENST00000407422 E9PQ18 207 aa15.73■□□□□ 0.11
SMARCB1-204ENST00000407422 ANGPTL7O43827 346 aa15.73■□□□□ 0.11
SMARCB1-204ENST00000407422 ACSM1Q08AH1 577 aa15.73■□□□□ 0.11
SMARCB1-204ENST00000407422 FAM220AQ7Z4H9 259 aa15.73■□□□□ 0.11
SMARCB1-204ENST00000407422 RNFT2Q96EX2 444 aa15.73■□□□□ 0.11
SMARCB1-204ENST00000407422 AJUBAQ96IF1 538 aa15.73■□□□□ 0.11
SMARCB1-204ENST00000407422 CHST5Q9GZS9 411 aa15.73■□□□□ 0.11
SMARCB1-204ENST00000407422 RNF114Q9Y508 228 aa15.73■□□□□ 0.11
SMARCB1-204ENST00000407422 J3QRE1 110 aa15.72■□□□□ 0.11
SMARCB1-204ENST00000407422 TK1P04183 234 aa15.72■□□□□ 0.11
SMARCB1-204ENST00000407422 CCL3L1P16619 93 aa15.72■□□□□ 0.11
SMARCB1-204ENST00000407422 PAX6P26367 422 aa15.72■□□□□ 0.11
SMARCB1-204ENST00000407422 TREML4Q6UXN2 200 aa15.72■□□□□ 0.11
SMARCB1-204ENST00000407422 GDPGP1Q6ZNW5 385 aa15.72■□□□□ 0.11
SMARCB1-204ENST00000407422 Q6ZSV7 163 aa15.72■□□□□ 0.11
SMARCB1-204ENST00000407422 CBR4Q8N4T8 237 aa15.72■□□□□ 0.11
SMARCB1-204ENST00000407422 ZSCAN4Q8NAM6 433 aaPredicted RBP15.72■□□□□ 0.11
SMARCB1-204ENST00000407422 SLAMF9Q96A28 289 aa15.72■□□□□ 0.11
SMARCB1-204ENST00000407422 SF3B6Q9Y3B4 125 aaKnown RBP15.72■□□□□ 0.11
SMARCB1-204ENST00000407422 ORC6Q9Y5N6 252 aa15.72■□□□□ 0.11
SMARCB1-204ENST00000407422 BTBD17A6NE02 478 aa15.72■□□□□ 0.11
SMARCB1-204ENST00000407422 UBCP0CG48 685 aaKnown RBP15.72■□□□□ 0.11
SMARCB1-204ENST00000407422 PIPP12273 146 aaPredicted RBP15.72■□□□□ 0.11
SMARCB1-204ENST00000407422 ALDH3A2P51648 485 aa15.72■□□□□ 0.11
SMARCB1-204ENST00000407422 FUT6P51993 359 aa15.72■□□□□ 0.11
SMARCB1-204ENST00000407422 OR12D2P58182 307 aa15.72■□□□□ 0.11
SMARCB1-204ENST00000407422 SNRPGP62308 76 aaKnown RBP15.72■□□□□ 0.11
SMARCB1-204ENST00000407422 ZNF273Q14593 569 aa15.72■□□□□ 0.11
SMARCB1-204ENST00000407422 SLC25A30Q5SVS4 291 aa15.72■□□□□ 0.11
SMARCB1-204ENST00000407422 OR2G2Q8NGZ5 317 aa15.72■□□□□ 0.11
SMARCB1-204ENST00000407422 ADAT3Q96EY9 351 aaPredicted RBP15.72■□□□□ 0.11
SMARCB1-204ENST00000407422 CEP19Q96LK0 163 aa15.72■□□□□ 0.11
SMARCB1-204ENST00000407422 CITED1Q99966 193 aa15.72■□□□□ 0.11
SMARCB1-204ENST00000407422 FRRS1LQ9P0K9 344 aa15.72■□□□□ 0.11
SMARCB1-204ENST00000407422 MEX3AA1L020 520 aaKnown RBP15.71■□□□□ 0.11
SMARCB1-204ENST00000407422 GATBO75879 557 aaKnown RBP15.71■□□□□ 0.11
SMARCB1-204ENST00000407422 NANOS3P60323 173 aaKnown RBP15.71■□□□□ 0.11
SMARCB1-204ENST00000407422 COL10A1Q03692 680 aa15.71■□□□□ 0.11
SMARCB1-204ENST00000407422 ZFP1Q6P2D0 407 aa15.71■□□□□ 0.11
SMARCB1-204ENST00000407422 BRICD5Q6PL45 260 aa15.71■□□□□ 0.11
SMARCB1-204ENST00000407422 CCDC121Q6ZUS5 278 aa15.71■□□□□ 0.11
SMARCB1-204ENST00000407422 SLC25A26Q70HW3 274 aa15.71■□□□□ 0.11
SMARCB1-204ENST00000407422 BEND2Q8NDZ0 799 aa15.71■□□□□ 0.11
SMARCB1-204ENST00000407422 MBOAT4Q96T53 435 aa15.71■□□□□ 0.11
SMARCB1-204ENST00000407422 DAPL1A0PJW8 107 aa15.7■□□□□ 0.1
SMARCB1-204ENST00000407422 K7N7A8 449 aa15.7■□□□□ 0.1
SMARCB1-204ENST00000407422 SERPINA3P01011 423 aa15.7■□□□□ 0.1
SMARCB1-204ENST00000407422 PROK1P58294 105 aa15.7■□□□□ 0.1
SMARCB1-204ENST00000407422 OCLNQ16625 522 aa15.7■□□□□ 0.1
SMARCB1-204ENST00000407422 MIDNQ504T8 468 aa15.7■□□□□ 0.1
SMARCB1-204ENST00000407422 DHRS7BQ6IAN0 325 aaPredicted RBP15.7■□□□□ 0.1
SMARCB1-204ENST00000407422 ASCC1Q8N9N2 400 aaKnown RBP15.7■□□□□ 0.1
SMARCB1-204ENST00000407422 CCDC54Q8NEL0 328 aa15.7■□□□□ 0.1
SMARCB1-204ENST00000407422 BORCS8Q96FH0 119 aa15.7■□□□□ 0.1
SMARCB1-204ENST00000407422 FAM234AQ9H0X4 552 aa15.7■□□□□ 0.1
SMARCB1-204ENST00000407422 IGKV1-9A0A0C4DH69 117 aa15.69■□□□□ 0.1
SMARCB1-204ENST00000407422 A0A1W2PPH5 198 aa15.69■□□□□ 0.1
SMARCB1-204ENST00000407422 SLC16A6O15403 523 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms