RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 PAN3Q58A45 887 aaKnown RBP3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 TIGD3Q6B0B8 471 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 SLC25A25Q6KCM7 469 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 FAHD1Q6P587 224 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 CBLN3Q6UW01 205 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 C5orf46Q6UWT4 87 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 GRINAQ7Z429 371 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 LHFPL4Q7Z7J7 247 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 HMGN2P46Q86SG4 172 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 MDS2Q8NDY4 140 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 FDCSPQ8NFU4 85 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 OR2M3Q8NG83 312 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 SLC7A13Q8TCU3 470 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 GPR119Q8TDV5 335 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 GIPC3Q8TF64 312 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 ACOT11Q8WXI4 607 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 UPRTQ96BW1 309 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 SLC41A3Q96GZ6 507 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 SIGLEC12Q96PQ1 595 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 PRSS27Q9BQR3 290 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 TMEM43Q9BTV4 400 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 SLC19A3Q9BZV2 496 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 VCXQ9H320 206 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 QPCTLQ9NXS2 382 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 USE1Q9NZ43 259 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 ENOPH1Q9UHY7 261 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 TMCC3Q9ULS5 477 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 BOKQ9UMX3 212 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 KLF13Q9Y2Y9 288 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 CFAP47Q6ZTR5 3102 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 SPTA1P02549 2419 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 CACNA1CQ13936 2221 aa3.66□□□□□ -1.82
HMGB3P19-201ENST00000403971 FRYQ5TBA9 3013 aa3.65□□□□□ -1.82
HMGB3P19-201ENST00000403971 PCNX1Q96RV3 2341 aa3.65□□□□□ -1.82
HMGB3P19-201ENST00000403971 TRAV17A0A0B4J275 112 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 FAM168BA1KXE4 195 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 CPSF4LA6NMK7 179 aaKnown RBP3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 B4DXG7 233 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 F8WDY8 70 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 MKRN2OSH3BPM6 223 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 KLRC4-KLRK1H3BQV0 150 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 ZNF208O43345 1280 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 CCNB2O95067 398 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 ZNF17P17021 662 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 KLK2P20151 261 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 GSTM3P21266 225 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 DPP4P27487 766 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 ELK4P28324 431 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 YAP1P46937 504 aaKnown RBP3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 GSSP48637 474 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 HSPA13P48723 471 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 IDH2P48735 452 aaKnown RBP3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 POLR2HP52434 150 aaKnown RBP3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 CTBP2P56545 445 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 DSCR4P56555 118 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 ARG2P78540 354 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 PRKCDQ05655 676 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 MERTKQ12866 999 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 QPRTQ15274 297 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 INAQ16352 499 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 EXOC3L2Q2M3D2 409 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 NDUFAF6Q330K2 333 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 ANKDD1AQ495B1 522 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 PRAMEF20Q5VT98 475 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 KDM4DQ6B0I6 523 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 C1orf94Q6P1W5 598 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 Q6ZS92 163 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 MBOAT2Q6ZWT7 520 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 TMEM179BQ7Z7N9 219 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 NKAIN4Q8IVV8 208 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 GTPBP8Q8N3Z3 284 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 CLDN22Q8N7P3 220 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 GATSQ8NAP1 163 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 ZFP62Q8NB50 900 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 OR2M7Q8NG81 312 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 OR10G2Q8NGC3 310 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 OR4K17Q8NGC6 315 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 OR4K5Q8NGD3 323 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 OR1J4Q8NGS1 313 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 ZNF563Q8TA94 476 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 PIGXQ8TBF5 258 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 TMEM239Q8WW34 195 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 SH3YL1Q96HL8 342 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 VSIG2Q96IQ7 327 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 OR5M11Q96RB7 305 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 SLC29A1Q99808 456 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 CIB1Q99828 191 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 OPN3Q9H1Y3 402 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 DSN1Q9H410 356 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 COQ10BQ9H8M1 238 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 VNN3Q9NY84 501 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 TAS2R3Q9NYW6 316 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 PDP1Q9P0J1 537 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 RPS6KB2Q9UBS0 482 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 C15orf41Q9Y2V0 281 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 MED31Q9Y3C7 131 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 U3KQV3 271 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 SHANK1Q9Y566 2161 aa3.65□□□□□ -1.83
HMGB3P19-201ENST00000403971 POLEQ07864 2286 aa3.64□□□□□ -1.83
HMGB3P19-201ENST00000403971 MYO7BQ6PIF6 2116 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms