RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 J3QT63 122 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 DLGAP1O14490 977 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 SIGLEC5O15389 551 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 HOXA3O43365 443 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 SULT1C4O75897 302 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 NXPH2O95156 264 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 ECDO95905 644 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 IGHV1-69P01742 117 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 LIPFP07098 398 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 ACAA1P09110 424 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 PGA5P0DJD9 388 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 DBTP11182 482 aaKnown RBP4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 ZNF19P17023 458 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 GABRB1P18505 474 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 CCL1P22362 96 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 CFPP27918 469 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 CAPZA1P52907 286 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 IL13RA1P78552 427 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 ZNF91Q05481 1191 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 TMED1Q13445 227 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 UBE2V2Q15819 145 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 CDONQ4KMG0 1287 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 AWAT1Q58HT5 328 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 LRRC10Q5BKY1 277 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 ACP7Q6ZNF0 438 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 ZBTB49Q6ZSB9 765 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 Q6ZSR3 168 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 FAM220AQ7Z4H9 259 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 LHFPL3Q86UP9 236 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 ENTHD1Q8IYW4 607 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 FAM185AQ8N0U4 392 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 Q8N7P7 452 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 POC1AQ8NBT0 407 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 LY6G5BQ8NDX9 201 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 OR2G2Q8NGZ5 317 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 ZNF671Q8TAW3 534 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 TRUB1Q8WWH5 349 aaKnown RBP4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 C12orf43Q96C57 262 aaKnown RBP4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 ADAT3Q96EY9 351 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 MED30Q96HR3 178 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 C4orf36Q96KX1 117 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 DCTN5Q9BTE1 182 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 C9orf16Q9BUW7 83 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 CNTD2Q9H8S5 307 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 PLEKHA1Q9HB21 404 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 OR14J1Q9UGF5 321 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 MYRFQ9Y2G1 1151 aa4.74□□□□□ -1.65
HMGB1P20-201ENST00000402555 VWFP04275 2813 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 NOTCH1P46531 2555 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 IGKV1-9A0A0C4DH69 117 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 LOC100130705A0A1B0GUX0 176 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 DHRS7CA6NNS2 312 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 E9PI62 339 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 RNASEK-C17orf49H0YIS7 233 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 SLC16A6O15403 523 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 CLIC3O95833 236 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 RNASE1P07998 156 aaKnown RBP4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 MELTFP08582 738 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 HTR1AP08908 422 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 HKR1P10072 659 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 CALCBP10092 127 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 RAB6AP20340 208 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 OMGP23515 440 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 MPZP25189 248 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 PRDX2P32119 198 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 COMPP49747 757 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 ACTC1P68032 377 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 ACTA1P68133 377 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 PDCD1Q15116 288 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 SMN1Q16637 294 aaKnown RBP4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 LRRC36Q1X8D7 754 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 SMIM21Q3B7S5 101 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 SLC25A30Q5SVS4 291 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 MEDAGQ5VYS4 303 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 LPCAT4Q643R3 524 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 RNF144BQ7Z419 303 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 ZNF573Q86YE8 665 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 C10orf67Q8IYJ2 551 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 ACBD7Q8N6N7 88 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 C3orf56Q8N813 242 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 OR4M1Q8NGD0 313 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 OR51A4Q8NGJ6 313 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 RHOXF1Q8NHV9 184 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 C8orf46Q8TAG6 207 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 APH1BQ8WW43 257 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 GATAD2BQ8WXI9 593 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 TNFRSF14Q92956 283 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 SLAMF9Q96A28 289 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 SLC25A28Q96A46 364 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 RFT1Q96AA3 541 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 FGGYQ96C11 551 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 PELI1Q96FA3 418 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 SDSLQ96GA7 329 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 NRIP2Q9BQI9 281 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 ADI1Q9BV57 179 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 ALG8Q9BVK2 526 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 CHIAQ9BZP6 476 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 CHST5Q9GZS9 411 aa4.73□□□□□ -1.65
HMGB1P20-201ENST00000402555 DNTTIP1Q9H147 329 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms