RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 LRRC10Q5BKY1 277 aa11.65□□□□□ -0.55
HLA-DQB1-202ENST00000399079 LCE2DQ5TA82 110 aaPredicted RBP11.65□□□□□ -0.55
HLA-DQB1-202ENST00000399079 TMPRSS11AQ6ZMR5 421 aa11.65□□□□□ -0.55
HLA-DQB1-202ENST00000399079 UTS2BQ765I0 119 aa11.65□□□□□ -0.55
HLA-DQB1-202ENST00000399079 PNLDC1Q8NA58 520 aaKnown RBP11.65□□□□□ -0.55
HLA-DQB1-202ENST00000399079 OR13C9Q8NGT0 318 aa11.65□□□□□ -0.55
HLA-DQB1-202ENST00000399079 RGP1Q92546 391 aaPredicted RBP11.65□□□□□ -0.55
HLA-DQB1-202ENST00000399079 SPACA5Q96QH8 159 aa11.65□□□□□ -0.55
HLA-DQB1-202ENST00000399079 PCGF1Q9BSM1 259 aa11.65□□□□□ -0.55
HLA-DQB1-202ENST00000399079 PKIBQ9C010 78 aa11.65□□□□□ -0.55
HLA-DQB1-202ENST00000399079 COMMD4Q9H0A8 199 aa11.65□□□□□ -0.55
HLA-DQB1-202ENST00000399079 RASL12Q9NYN1 266 aa11.65□□□□□ -0.55
HLA-DQB1-202ENST00000399079 SLC25A10Q9UBX3 287 aaPredicted RBP11.65□□□□□ -0.55
HLA-DQB1-202ENST00000399079 SOX21Q9Y651 276 aaPredicted RBP11.65□□□□□ -0.55
HLA-DQB1-202ENST00000399079 ZNF879B4DU55 563 aa11.64□□□□□ -0.55
HLA-DQB1-202ENST00000399079 H0YHG0 523 aa11.64□□□□□ -0.55
HLA-DQB1-202ENST00000399079 LIPFP07098 398 aa11.64□□□□□ -0.55
HLA-DQB1-202ENST00000399079 PPIAL4GP0DN37 164 aa11.64□□□□□ -0.55
HLA-DQB1-202ENST00000399079 MMP9P14780 707 aa11.64□□□□□ -0.55
HLA-DQB1-202ENST00000399079 ATF1P18846 271 aa11.64□□□□□ -0.55
HLA-DQB1-202ENST00000399079 AZGP1P25311 298 aaKnown RBP11.64□□□□□ -0.55
HLA-DQB1-202ENST00000399079 C21orf33P30042 268 aaPredicted RBP11.64□□□□□ -0.55
HLA-DQB1-202ENST00000399079 RBP2P50120 134 aa11.64□□□□□ -0.55
HLA-DQB1-202ENST00000399079 MTCP1P56278 107 aa11.64□□□□□ -0.55
HLA-DQB1-202ENST00000399079 ERVK11-1P61568 191 aa11.64□□□□□ -0.55
HLA-DQB1-202ENST00000399079 SMIM21Q3B7S5 101 aa11.64□□□□□ -0.55
HLA-DQB1-202ENST00000399079 SLC25A26Q70HW3 274 aa11.64□□□□□ -0.55
HLA-DQB1-202ENST00000399079 AHSA2Q719I0 299 aa11.64□□□□□ -0.55
HLA-DQB1-202ENST00000399079 PHC2Q8IXK0 858 aa11.64□□□□□ -0.55
HLA-DQB1-202ENST00000399079 BPIFB2Q8N4F0 458 aa11.64□□□□□ -0.55
HLA-DQB1-202ENST00000399079 CD177Q8N6Q3 437 aa11.64□□□□□ -0.55
HLA-DQB1-202ENST00000399079 TMEM158Q8WZ71 300 aa11.64□□□□□ -0.55
HLA-DQB1-202ENST00000399079 H1FXQ92522 213 aaKnown RBP11.64□□□□□ -0.55
HLA-DQB1-202ENST00000399079 SLAMF9Q96A28 289 aa11.64□□□□□ -0.55
HLA-DQB1-202ENST00000399079 RFT1Q96AA3 541 aa11.64□□□□□ -0.55
HLA-DQB1-202ENST00000399079 MED30Q96HR3 178 aa11.64□□□□□ -0.55
HLA-DQB1-202ENST00000399079 ELL3Q9HB65 397 aaPredicted RBP11.64□□□□□ -0.55
HLA-DQB1-202ENST00000399079 HES4Q9HCC6 221 aa11.64□□□□□ -0.55
HLA-DQB1-202ENST00000399079 BABAM2Q9NXR7 383 aa11.64□□□□□ -0.55
HLA-DQB1-202ENST00000399079 OR14J1Q9UGF5 321 aa11.64□□□□□ -0.55
HLA-DQB1-202ENST00000399079 PSORS1C1Q9UIG5 152 aa11.64□□□□□ -0.55
HLA-DQB1-202ENST00000399079 EXOSC1Q9Y3B2 195 aaKnown RBP11.64□□□□□ -0.55
HLA-DQB1-202ENST00000399079 EFCAB10A6NFE3 127 aa11.63□□□□□ -0.55
HLA-DQB1-202ENST00000399079 SPRY1O43609 319 aaPredicted RBP11.63□□□□□ -0.55
HLA-DQB1-202ENST00000399079 TOX4O94842 621 aa11.63□□□□□ -0.55
HLA-DQB1-202ENST00000399079 ECDO95905 644 aaPredicted RBP11.63□□□□□ -0.55
HLA-DQB1-202ENST00000399079 CCDC159P0C7I6 412 aa11.63□□□□□ -0.55
HLA-DQB1-202ENST00000399079 OCM2P0CE71 109 aa11.63□□□□□ -0.55
HLA-DQB1-202ENST00000399079 OCMP0CE72 109 aaPredicted RBP11.63□□□□□ -0.55
HLA-DQB1-202ENST00000399079 PIPP12273 146 aaPredicted RBP11.63□□□□□ -0.55
HLA-DQB1-202ENST00000399079 NDUFB7P17568 137 aa11.63□□□□□ -0.55
HLA-DQB1-202ENST00000399079 POU3F4P49335 361 aa11.63□□□□□ -0.55
HLA-DQB1-202ENST00000399079 ATP1B3P54709 279 aa11.63□□□□□ -0.55
HLA-DQB1-202ENST00000399079 CDK5R1Q15078 307 aa11.63□□□□□ -0.55
HLA-DQB1-202ENST00000399079 CCDC58Q4VC31 144 aa11.63□□□□□ -0.55
HLA-DQB1-202ENST00000399079 RPL22L1Q6P5R6 122 aaKnown RBP11.63□□□□□ -0.55
HLA-DQB1-202ENST00000399079 BRD3OSQ6XYD6 125 aa11.63□□□□□ -0.55
HLA-DQB1-202ENST00000399079 ZNF485Q8NCK3 441 aa11.63□□□□□ -0.55
HLA-DQB1-202ENST00000399079 LY6G5BQ8NDX9 201 aa11.63□□□□□ -0.55
HLA-DQB1-202ENST00000399079 DNAAF1Q8NEP3 725 aa11.63□□□□□ -0.55
HLA-DQB1-202ENST00000399079 TMEM185AQ8NFB2 350 aa11.63□□□□□ -0.55
HLA-DQB1-202ENST00000399079 ZNF418Q8TF45 676 aaPredicted RBP11.63□□□□□ -0.55
HLA-DQB1-202ENST00000399079 TSEN15Q8WW01 171 aaKnown RBP11.63□□□□□ -0.55
HLA-DQB1-202ENST00000399079 WDFY2Q96P53 400 aa11.63□□□□□ -0.55
HLA-DQB1-202ENST00000399079 OPALINQ96PE5 141 aa11.63□□□□□ -0.55
HLA-DQB1-202ENST00000399079 TBX15Q96SF7 602 aa11.63□□□□□ -0.55
HLA-DQB1-202ENST00000399079 DCTN5Q9BTE1 182 aa11.63□□□□□ -0.55
HLA-DQB1-202ENST00000399079 CNTD2Q9H8S5 307 aa11.63□□□□□ -0.55
HLA-DQB1-202ENST00000399079 PLCXD1Q9NUJ7 323 aa11.63□□□□□ -0.55
HLA-DQB1-202ENST00000399079 CHCHD3Q9NX63 227 aaKnown RBP11.63□□□□□ -0.55
HLA-DQB1-202ENST00000399079 CNOT2Q9NZN8 540 aaKnown RBP11.63□□□□□ -0.55
HLA-DQB1-202ENST00000399079 DHDHQ9UQ10 334 aa11.63□□□□□ -0.55
HLA-DQB1-202ENST00000399079 H0YJX3 145 aa11.62□□□□□ -0.55
HLA-DQB1-202ENST00000399079 GPR37O15354 613 aa11.62□□□□□ -0.55
HLA-DQB1-202ENST00000399079 CALCBP10092 127 aa11.62□□□□□ -0.55
HLA-DQB1-202ENST00000399079 PRKACBP22694 351 aa11.62□□□□□ -0.55
HLA-DQB1-202ENST00000399079 FPR2P25090 351 aa11.62□□□□□ -0.55
HLA-DQB1-202ENST00000399079 PRDX2P32119 198 aa11.62□□□□□ -0.55
HLA-DQB1-202ENST00000399079 NPBWR2P48146 333 aa11.62□□□□□ -0.55
HLA-DQB1-202ENST00000399079 SOX2P48431 317 aa11.62□□□□□ -0.55
HLA-DQB1-202ENST00000399079 DOC2BQ14184 412 aa11.62□□□□□ -0.55
HLA-DQB1-202ENST00000399079 C11orf91Q3C1V1 193 aa11.62□□□□□ -0.55
HLA-DQB1-202ENST00000399079 METTL11BQ5VVY1 283 aa11.62□□□□□ -0.55
HLA-DQB1-202ENST00000399079 CRIP3Q6Q6R5 217 aa11.62□□□□□ -0.55
HLA-DQB1-202ENST00000399079 SERPINA12Q8IW75 414 aa11.62□□□□□ -0.55
HLA-DQB1-202ENST00000399079 ZFP41Q8N8Y5 198 aa11.62□□□□□ -0.55
HLA-DQB1-202ENST00000399079 HAVCR2Q8TDQ0 301 aa11.62□□□□□ -0.55
HLA-DQB1-202ENST00000399079 SDSLQ96GA7 329 aa11.62□□□□□ -0.55
HLA-DQB1-202ENST00000399079 CEP19Q96LK0 163 aa11.62□□□□□ -0.55
HLA-DQB1-202ENST00000399079 MS4A7Q9GZW8 240 aaPredicted RBP11.62□□□□□ -0.55
HLA-DQB1-202ENST00000399079 SIRPDQ9H106 197 aa11.62□□□□□ -0.55
HLA-DQB1-202ENST00000399079 ZCCHC4Q9H5U6 513 aa11.62□□□□□ -0.55
HLA-DQB1-202ENST00000399079 ONECUT1Q9UBC0 465 aa11.62□□□□□ -0.55
HLA-DQB1-202ENST00000399079 IL36RNQ9UBH0 155 aa11.62□□□□□ -0.55
HLA-DQB1-202ENST00000399079 OGG1O15527 345 aa11.61□□□□□ -0.55
HLA-DQB1-202ENST00000399079 CAPZA1P52907 286 aa11.61□□□□□ -0.55
HLA-DQB1-202ENST00000399079 DLX1P56177 255 aa11.61□□□□□ -0.55
HLA-DQB1-202ENST00000399079 CAV3P56539 151 aa11.61□□□□□ -0.55
HLA-DQB1-202ENST00000399079 HILS1P60008 231 aa11.61□□□□□ -0.55
HLA-DQB1-202ENST00000399079 PRB3Q04118 309 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms