RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 LIPKQ5VXJ0 399 aa13.12□□□□□ -0.31
MBD1-207ENST00000398488 ACP7Q6ZNF0 438 aa13.12□□□□□ -0.31
MBD1-207ENST00000398488 SPARTQ8N0X7 666 aa13.12□□□□□ -0.31
MBD1-207ENST00000398488 OR52N4Q8NGI2 321 aa13.12□□□□□ -0.31
MBD1-207ENST00000398488 OR5D14Q8NGL3 314 aa13.12□□□□□ -0.31
MBD1-207ENST00000398488 ANGPTL6Q8NI99 470 aa13.12□□□□□ -0.31
MBD1-207ENST00000398488 TMEM186Q96B77 213 aa13.12□□□□□ -0.31
MBD1-207ENST00000398488 PPIL3Q9H2H8 161 aaKnown RBP13.12□□□□□ -0.31
MBD1-207ENST00000398488 HES4Q9HCC6 221 aa13.12□□□□□ -0.31
MBD1-207ENST00000398488 ACOT13Q9NPJ3 140 aa13.12□□□□□ -0.31
MBD1-207ENST00000398488 IL36RNQ9UBH0 155 aa13.12□□□□□ -0.31
MBD1-207ENST00000398488 ZNF222Q9UK12 451 aa13.12□□□□□ -0.31
MBD1-207ENST00000398488 ALX3O95076 343 aa13.11□□□□□ -0.31
MBD1-207ENST00000398488 MUC1P15941 1255 aaPredicted RBP13.11□□□□□ -0.31
MBD1-207ENST00000398488 PCMT1P22061 227 aa13.11□□□□□ -0.31
MBD1-207ENST00000398488 PITPNBP48739 271 aa13.11□□□□□ -0.31
MBD1-207ENST00000398488 ATP1B3P54709 279 aa13.11□□□□□ -0.31
MBD1-207ENST00000398488 RPS25P62851 125 aaKnown RBP13.11□□□□□ -0.31
MBD1-207ENST00000398488 TPBGQ13641 420 aa13.11□□□□□ -0.31
MBD1-207ENST00000398488 TBCEQ15813 527 aaPredicted RBP13.11□□□□□ -0.31
MBD1-207ENST00000398488 WDR25Q64LD2 544 aaPredicted RBP13.11□□□□□ -0.31
MBD1-207ENST00000398488 UNQ9370/PRO34162Q6UXP9 181 aa13.11□□□□□ -0.31
MBD1-207ENST00000398488 C1orf229Q6ZS94 237 aaPredicted RBP13.11□□□□□ -0.31
MBD1-207ENST00000398488 C1QL2Q7Z5L3 287 aa13.11□□□□□ -0.31
MBD1-207ENST00000398488 CD177Q8N6Q3 437 aa13.11□□□□□ -0.31
MBD1-207ENST00000398488 OR51F2Q8NH61 342 aa13.11□□□□□ -0.31
MBD1-207ENST00000398488 DACT3Q96B18 629 aaPredicted RBP13.11□□□□□ -0.31
MBD1-207ENST00000398488 SPSB1Q96BD6 273 aa13.11□□□□□ -0.31
MBD1-207ENST00000398488 GAFA1Q96PS6 74 aa13.11□□□□□ -0.31
MBD1-207ENST00000398488 DERL3Q96Q80 235 aa13.11□□□□□ -0.31
MBD1-207ENST00000398488 TMED9Q9BVK6 235 aa13.11□□□□□ -0.31
MBD1-207ENST00000398488 NLKQ9UBE8 527 aa13.11□□□□□ -0.31
MBD1-207ENST00000398488 DNAJB11Q9UBS4 358 aa13.11□□□□□ -0.31
MBD1-207ENST00000398488 BLOC1S6Q9UL45 172 aa13.11□□□□□ -0.31
MBD1-207ENST00000398488 SF3B6Q9Y3B4 125 aaKnown RBP13.11□□□□□ -0.31
MBD1-207ENST00000398488 OR2AT4A6NND4 320 aa13.1□□□□□ -0.31
MBD1-207ENST00000398488 A8MXK9 166 aa13.1□□□□□ -0.31
MBD1-207ENST00000398488 ZNF879B4DU55 563 aa13.1□□□□□ -0.31
MBD1-207ENST00000398488 C22orf46C9J442 243 aa13.1□□□□□ -0.31
MBD1-207ENST00000398488 BCL3P20749 454 aa13.1□□□□□ -0.31
MBD1-207ENST00000398488 ZP1P60852 638 aa13.1□□□□□ -0.31
MBD1-207ENST00000398488 PDZK1IP1Q13113 114 aa13.1□□□□□ -0.31
MBD1-207ENST00000398488 SSX1Q16384 188 aa13.1□□□□□ -0.31
MBD1-207ENST00000398488 DGUOKQ16854 277 aa13.1□□□□□ -0.31
MBD1-207ENST00000398488 CR1LQ2VPA4 569 aa13.1□□□□□ -0.31
MBD1-207ENST00000398488 ZNF788Q6ZQV5 615 aa13.1□□□□□ -0.31
MBD1-207ENST00000398488 LHFPL2Q6ZUX7 228 aa13.1□□□□□ -0.31
MBD1-207ENST00000398488 OR8B3Q8NGG8 313 aa13.1□□□□□ -0.31
MBD1-207ENST00000398488 TMEM203Q969S6 136 aa13.1□□□□□ -0.31
MBD1-207ENST00000398488 TMIGD2Q96BF3 282 aa13.1□□□□□ -0.31
MBD1-207ENST00000398488 OR8B2Q96RD0 313 aa13.1□□□□□ -0.31
MBD1-207ENST00000398488 MGLLQ99685 303 aa13.1□□□□□ -0.31
MBD1-207ENST00000398488 SSBP3Q9BWW4 388 aaPredicted RBP13.1□□□□□ -0.31
MBD1-207ENST00000398488 YTHDF1Q9BYJ9 559 aaKnown RBP13.1□□□□□ -0.31
MBD1-207ENST00000398488 NOX4Q9NPH5 578 aa13.1□□□□□ -0.31
MBD1-207ENST00000398488 RBFOX1Q9NWB1 397 aaKnown RBP13.1□□□□□ -0.31
MBD1-207ENST00000398488 KAAG1Q9UBP8 84 aa13.1□□□□□ -0.31
MBD1-207ENST00000398488 KCNS2Q9ULS6 477 aa13.1□□□□□ -0.31
MBD1-207ENST00000398488 RFPL4AA6NLU0 287 aa13.09□□□□□ -0.31
MBD1-207ENST00000398488 RFPL4AL1F8VTS6 287 aa13.09□□□□□ -0.31
MBD1-207ENST00000398488 DVL1O14640 695 aa13.09□□□□□ -0.31
MBD1-207ENST00000398488 TMPRSS2O15393 492 aa13.09□□□□□ -0.31
MBD1-207ENST00000398488 HCKP08631 526 aa13.09□□□□□ -0.31
MBD1-207ENST00000398488 ACAA1P09110 424 aaPredicted RBP13.09□□□□□ -0.31
MBD1-207ENST00000398488 RAB3AP20336 220 aa13.09□□□□□ -0.31
MBD1-207ENST00000398488 MLLT11Q13015 90 aaPredicted RBP13.09□□□□□ -0.31
MBD1-207ENST00000398488 KISS1Q15726 138 aa13.09□□□□□ -0.31
MBD1-207ENST00000398488 ACSM3Q53FZ2 586 aa13.09□□□□□ -0.31
MBD1-207ENST00000398488 ESCO2Q56NI9 601 aa13.09□□□□□ -0.31
MBD1-207ENST00000398488 FAM120AOSQ5T036 256 aa13.09□□□□□ -0.31
MBD1-207ENST00000398488 ATPAF1Q5TC12 328 aaPredicted RBP13.09□□□□□ -0.31
MBD1-207ENST00000398488 TMEM91Q6ZNR0 172 aa13.09□□□□□ -0.31
MBD1-207ENST00000398488 GLCCI1Q86VQ1 547 aa13.09□□□□□ -0.31
MBD1-207ENST00000398488 PHC2Q8IXK0 858 aa13.09□□□□□ -0.31
MBD1-207ENST00000398488 C12orf43Q96C57 262 aaKnown RBP13.09□□□□□ -0.31
MBD1-207ENST00000398488 CEP19Q96LK0 163 aa13.09□□□□□ -0.31
MBD1-207ENST00000398488 TMPRSS13Q9BYE2 586 aa13.09□□□□□ -0.31
MBD1-207ENST00000398488 ISYNA1Q9NPH2 558 aa13.09□□□□□ -0.31
MBD1-207ENST00000398488 LRCH1Q9Y2L9 728 aa13.09□□□□□ -0.31
MBD1-207ENST00000398488 POLDIP2Q9Y2S7 368 aa13.09□□□□□ -0.31
MBD1-207ENST00000398488 POLR3KQ9Y2Y1 108 aaPredicted RBP13.09□□□□□ -0.31
MBD1-207ENST00000398488 MAB21L2Q9Y586 359 aa13.09□□□□□ -0.31
MBD1-207ENST00000398488 TRAV20A0A0B4J274 112 aa13.08□□□□□ -0.31
MBD1-207ENST00000398488 GABRPO00591 440 aa13.08□□□□□ -0.31
MBD1-207ENST00000398488 FOXH1O75593 365 aa13.08□□□□□ -0.31
MBD1-207ENST00000398488 GPX5O75715 221 aa13.08□□□□□ -0.31
MBD1-207ENST00000398488 SC5DO75845 299 aa13.08□□□□□ -0.31
MBD1-207ENST00000398488 NXPH2O95156 264 aa13.08□□□□□ -0.31
MBD1-207ENST00000398488 CD2P06729 351 aa13.08□□□□□ -0.31
MBD1-207ENST00000398488 SFTPBP07988 381 aa13.08□□□□□ -0.31
MBD1-207ENST00000398488 CPEP16870 476 aa13.08□□□□□ -0.31
MBD1-207ENST00000398488 HOXB4P17483 251 aaPredicted RBP13.08□□□□□ -0.31
MBD1-207ENST00000398488 TGFBR2P37173 567 aa13.08□□□□□ -0.31
MBD1-207ENST00000398488 GNB2P62879 340 aa13.08□□□□□ -0.31
MBD1-207ENST00000398488 IKZF1Q13422 519 aa13.08□□□□□ -0.31
MBD1-207ENST00000398488 UFD1Q92890 307 aa13.08□□□□□ -0.31
MBD1-207ENST00000398488 RASL12Q9NYN1 266 aa13.08□□□□□ -0.31
MBD1-207ENST00000398488 CLN8Q9UBY8 286 aa13.08□□□□□ -0.31
MBD1-207ENST00000398488 OPN4Q9UHM6 478 aa13.08□□□□□ -0.31
MBD1-207ENST00000398488 WNK2Q9Y3S1 2297 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms