RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 H7C2Y5 167 aa7.19□□□□□ -1.26
PTPRD-204ENST00000397606 ALDH3B1P43353 468 aa7.19□□□□□ -1.26
PTPRD-204ENST00000397606 FAM27E3Q08E93 113 aa7.19□□□□□ -1.26
PTPRD-204ENST00000397606 ASAH1Q13510 395 aa7.19□□□□□ -1.26
PTPRD-204ENST00000397606 SLC9A3R2Q15599 337 aa7.19□□□□□ -1.26
PTPRD-204ENST00000397606 DEDD2Q8WXF8 326 aa7.19□□□□□ -1.26
PTPRD-204ENST00000397606 BCL2L2Q92843 193 aaPredicted RBP7.19□□□□□ -1.26
PTPRD-204ENST00000397606 GALMQ96C23 342 aa7.19□□□□□ -1.26
PTPRD-204ENST00000397606 PLEKHF2Q9H8W4 249 aa7.19□□□□□ -1.26
PTPRD-204ENST00000397606 CSAG2Q9Y5P2 127 aa7.19□□□□□ -1.26
PTPRD-204ENST00000397606 NBASA2RRP1 2371 aa7.19□□□□□ -1.26
PTPRD-204ENST00000397606 ATP6V1G2-DDX39BF2Z307 99 aa7.19□□□□□ -1.26
PTPRD-204ENST00000397606 CTAG2O75638 210 aa7.19□□□□□ -1.26
PTPRD-204ENST00000397606 NGFP01138 241 aa7.19□□□□□ -1.26
PTPRD-204ENST00000397606 RFX2P48378 723 aa7.19□□□□□ -1.26
PTPRD-204ENST00000397606 GK2Q14410 553 aaPredicted RBP7.19□□□□□ -1.26
PTPRD-204ENST00000397606 CEACAM21Q3KPI0 293 aa7.19□□□□□ -1.26
PTPRD-204ENST00000397606 TRAT1Q6PIZ9 186 aa7.19□□□□□ -1.26
PTPRD-204ENST00000397606 MOGAT3Q86VF5 341 aa7.19□□□□□ -1.26
PTPRD-204ENST00000397606 ZNF2Q9BSG1 426 aaPredicted RBP7.19□□□□□ -1.26
PTPRD-204ENST00000397606 CISD1Q9NZ45 108 aaKnown RBP7.19□□□□□ -1.26
PTPRD-204ENST00000397606 IGKV1D-43A0A0B4J1Z2 117 aa7.19□□□□□ -1.26
PTPRD-204ENST00000397606 TRBV5-5A0A0J9YX44 114 aa7.19□□□□□ -1.26
PTPRD-204ENST00000397606 A8MV72 311 aaPredicted RBP7.19□□□□□ -1.26
PTPRD-204ENST00000397606 C3orf80F5H4A9 247 aa7.19□□□□□ -1.26
PTPRD-204ENST00000397606 ZNHIT1O43257 154 aa7.19□□□□□ -1.26
PTPRD-204ENST00000397606 TOXO94900 526 aa7.19□□□□□ -1.26
PTPRD-204ENST00000397606 PDZK1IP1Q13113 114 aa7.19□□□□□ -1.26
PTPRD-204ENST00000397606 OR2AK2Q8NG84 335 aa7.19□□□□□ -1.26
PTPRD-204ENST00000397606 OR2T35Q8NGX2 323 aa7.19□□□□□ -1.26
PTPRD-204ENST00000397606 GIMAP1Q8WWP7 306 aa7.19□□□□□ -1.26
PTPRD-204ENST00000397606 ST8SIA4Q92187 359 aa7.19□□□□□ -1.26
PTPRD-204ENST00000397606 ARHGAP5-AS1Q96IT6 56 aa7.19□□□□□ -1.26
PTPRD-204ENST00000397606 S1PR3Q99500 378 aa7.19□□□□□ -1.26
PTPRD-204ENST00000397606 HSPB11Q9Y547 144 aa7.19□□□□□ -1.26
PTPRD-204ENST00000397606 SNRNP200O75643 2136 aaKnown RBP7.19□□□□□ -1.26
PTPRD-204ENST00000397606 COL6A6A6NMZ7 2263 aa7.19□□□□□ -1.26
PTPRD-204ENST00000397606 IGHV1-2P23083 117 aa7.19□□□□□ -1.26
PTPRD-204ENST00000397606 LAIR2Q6ISS4 152 aa7.19□□□□□ -1.26
PTPRD-204ENST00000397606 SCGB1C1Q8TD33 95 aa7.19□□□□□ -1.26
PTPRD-204ENST00000397606 PLPPR2Q96GM1 343 aa7.19□□□□□ -1.26
PTPRD-204ENST00000397606 SRRQ9GZT4 340 aa7.19□□□□□ -1.26
PTPRD-204ENST00000397606 IL18BPO95998 194 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 IFNA5P01569 189 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 APOA2P02652 100 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 RPP30P78346 268 aaKnown RBP7.18□□□□□ -1.26
PTPRD-204ENST00000397606 MPV17LQ2QL34 196 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 FBXW12Q6X9E4 464 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 DMBX1Q8NFW5 382 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 MED30Q96HR3 178 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 PLEKHB1Q9UF11 243 aaPredicted RBP7.18□□□□□ -1.26
PTPRD-204ENST00000397606 ZNF106Q9H2Y7 1883 aaKnown RBP7.18□□□□□ -1.26
PTPRD-204ENST00000397606 C1QTNF9BB2RNN3 333 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 ENSAO43768 121 aaKnown RBP7.18□□□□□ -1.26
PTPRD-204ENST00000397606 TPPPO94811 219 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 HOXB5P09067 269 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 C1QTNF9P0C862 333 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 KLK2P20151 261 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 CCR6P51684 374 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 B3GALT5-AS1P59052 145 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 H3F3AP84243 136 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 NAAAQ02083 359 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 ZNF362Q5T0B9 420 aaPredicted RBP7.18□□□□□ -1.26
PTPRD-204ENST00000397606 ARRDC1Q8N5I2 433 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 OR8G5Q8NG78 346 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 OR10X1Q8NGY0 326 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 OR14K1Q8NGZ2 314 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 SEH1LQ96EE3 360 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 PGLYRP3Q96LB9 341 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 AKIP1Q9NQ31 210 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 OR2S2Q9NQN1 319 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 ZDHHC8Q9ULC8 765 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 hADV38S2A0JD32 116 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 ETV2O00321 342 aaPredicted RBP7.18□□□□□ -1.26
PTPRD-204ENST00000397606 CYB5BO43169 146 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 ADAM20O43506 726 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 CD3DP04234 171 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 FCGR2CP31995 323 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 HRH1P35367 487 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 GPR12P47775 334 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 RBMXL3Q8N7X1 1067 aaKnown RBP7.18□□□□□ -1.26
PTPRD-204ENST00000397606 RNASE6Q93091 150 aaKnown RBP7.18□□□□□ -1.26
PTPRD-204ENST00000397606 ARL11Q969Q4 196 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 KLHDC3Q9BQ90 382 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 C20orf85Q9H1P6 137 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 LOC390937A0A1W2PQ73 354 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 SDCBPO00560 298 aaPredicted RBP7.18□□□□□ -1.26
PTPRD-204ENST00000397606 PHF1O43189 567 aaPredicted RBP7.18□□□□□ -1.26
PTPRD-204ENST00000397606 IFNA7P01567 189 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 OR4A8P0C604 315 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 CALCRP30988 508 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 SERPINF1P36955 418 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 PDCD1Q15116 288 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 SNAI3Q3KNW1 292 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 PHLDA2Q53GA4 152 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 LGI3Q8N145 548 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 TMEM229BQ8NBD8 167 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 GRPEL2Q8TAA5 225 aa7.18□□□□□ -1.26
PTPRD-204ENST00000397606 KLF14Q8TD94 323 aaPredicted RBP7.18□□□□□ -1.26
PTPRD-204ENST00000397606 C22orf15Q8WYQ4 148 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms