RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 ACSM1Q08AH1 577 aa17.64■□□□□ 0.41
TSPAN4-206ENST00000397408 SMIM21Q3B7S5 101 aa17.64■□□□□ 0.41
TSPAN4-206ENST00000397408 CHRFAM7AQ494W8 412 aa17.64■□□□□ 0.41
TSPAN4-206ENST00000397408 DUX4L9Q6RFH8 374 aaPredicted RBP17.64■□□□□ 0.41
TSPAN4-206ENST00000397408 ACP7Q6ZNF0 438 aa17.64■□□□□ 0.41
TSPAN4-206ENST00000397408 FAM216BQ8N7L0 139 aa17.64■□□□□ 0.41
TSPAN4-206ENST00000397408 SLAMF9Q96A28 289 aa17.64■□□□□ 0.41
TSPAN4-206ENST00000397408 RFT1Q96AA3 541 aa17.64■□□□□ 0.41
TSPAN4-206ENST00000397408 NEK6Q9HC98 313 aa17.64■□□□□ 0.41
TSPAN4-206ENST00000397408 MMP26Q9NRE1 261 aa17.64■□□□□ 0.41
TSPAN4-206ENST00000397408 RASL12Q9NYN1 266 aa17.64■□□□□ 0.41
TSPAN4-206ENST00000397408 DUX4Q9UBX2 424 aa17.64■□□□□ 0.41
TSPAN4-206ENST00000397408 LPAR3Q9UBY5 353 aa17.64■□□□□ 0.41
TSPAN4-206ENST00000397408 PPIAL4CA0A0B4J2A2 164 aa17.63■□□□□ 0.41
TSPAN4-206ENST00000397408 OR2AT4A6NND4 320 aa17.63■□□□□ 0.41
TSPAN4-206ENST00000397408 TRAPPC2LH3BP13 241 aa17.63■□□□□ 0.41
TSPAN4-206ENST00000397408 HCKP08631 526 aa17.63■□□□□ 0.41
TSPAN4-206ENST00000397408 AMY2BP19961 511 aa17.63■□□□□ 0.41
TSPAN4-206ENST00000397408 NPY4RP50391 375 aa17.63■□□□□ 0.41
TSPAN4-206ENST00000397408 RPS11P62280 158 aaKnown RBP eCLIP17.63■□□□□ 0.41
TSPAN4-206ENST00000397408 ASPHD2Q6ICH7 369 aa17.63■□□□□ 0.41
TSPAN4-206ENST00000397408 SLC36A1Q7Z2H8 476 aa17.63■□□□□ 0.41
TSPAN4-206ENST00000397408 ANGPTL6Q8NI99 470 aa17.63■□□□□ 0.41
TSPAN4-206ENST00000397408 BEX2Q9BXY8 128 aa17.63■□□□□ 0.41
TSPAN4-206ENST00000397408 RASSF4Q9H2L5 321 aa17.63■□□□□ 0.41
TSPAN4-206ENST00000397408 INMTO95050 263 aa17.62■□□□□ 0.41
TSPAN4-206ENST00000397408 ALX3O95076 343 aa17.62■□□□□ 0.41
TSPAN4-206ENST00000397408 CD1AP06126 327 aa17.62■□□□□ 0.41
TSPAN4-206ENST00000397408 HOXB4P17483 251 aaPredicted RBP17.62■□□□□ 0.41
TSPAN4-206ENST00000397408 RAB3AP20336 220 aa17.62■□□□□ 0.41
TSPAN4-206ENST00000397408 GATA3P23771 443 aa17.62■□□□□ 0.41
TSPAN4-206ENST00000397408 Q499Y3 187 aa17.62■□□□□ 0.41
TSPAN4-206ENST00000397408 RNF144BQ7Z419 303 aa17.62■□□□□ 0.41
TSPAN4-206ENST00000397408 OR51A2Q8NGJ7 313 aa17.62■□□□□ 0.41
TSPAN4-206ENST00000397408 OR5D18Q8NGL1 313 aa17.62■□□□□ 0.41
TSPAN4-206ENST00000397408 CEP19Q96LK0 163 aa17.62■□□□□ 0.41
TSPAN4-206ENST00000397408 OR14A2Q96R54 314 aa17.62■□□□□ 0.41
TSPAN4-206ENST00000397408 DNTTIP1Q9H147 329 aa17.62■□□□□ 0.41
TSPAN4-206ENST00000397408 HES4Q9HCC6 221 aa17.62■□□□□ 0.41
TSPAN4-206ENST00000397408 MTCH1Q9NZJ7 389 aa17.62■□□□□ 0.41
TSPAN4-206ENST00000397408 SVEP1Q4LDE5 3571 aa17.61■□□□□ 0.41
TSPAN4-206ENST00000397408 JMJD1CQ15652 2540 aa17.61■□□□□ 0.41
TSPAN4-206ENST00000397408 IGKV1D-17A0A075B6S4 117 aa17.61■□□□□ 0.41
TSPAN4-206ENST00000397408 DVL1O14640 695 aa17.61■□□□□ 0.41
TSPAN4-206ENST00000397408 FCN3O75636 299 aa17.61■□□□□ 0.41
TSPAN4-206ENST00000397408 ACAA1P09110 424 aaPredicted RBP17.61■□□□□ 0.41
TSPAN4-206ENST00000397408 PSG2P11465 335 aa17.61■□□□□ 0.41
TSPAN4-206ENST00000397408 SELLP14151 372 aa17.61■□□□□ 0.41
TSPAN4-206ENST00000397408 MAP2K4P45985 399 aa17.61■□□□□ 0.41
TSPAN4-206ENST00000397408 GABRA2P47869 451 aa17.61■□□□□ 0.41
TSPAN4-206ENST00000397408 RIPPLY3P57055 190 aa17.61■□□□□ 0.41
TSPAN4-206ENST00000397408 GABARAPL2P60520 117 aa17.61■□□□□ 0.41
TSPAN4-206ENST00000397408 ERVK11-1P61568 191 aa17.61■□□□□ 0.41
TSPAN4-206ENST00000397408 IKZF1Q13422 519 aa17.61■□□□□ 0.41
TSPAN4-206ENST00000397408 ATPAF1Q5TC12 328 aaPredicted RBP17.61■□□□□ 0.41
TSPAN4-206ENST00000397408 ZNF529Q6P280 563 aa17.61■□□□□ 0.41
TSPAN4-206ENST00000397408 ZNF788Q6ZQV5 615 aa17.61■□□□□ 0.41
TSPAN4-206ENST00000397408 ST8SIA4Q92187 359 aa17.61■□□□□ 0.41
TSPAN4-206ENST00000397408 ORAI1Q96D31 301 aa17.61■□□□□ 0.41
TSPAN4-206ENST00000397408 GAFA1Q96PS6 74 aa17.61■□□□□ 0.41
TSPAN4-206ENST00000397408 TMPRSS13Q9BYE2 586 aa17.61■□□□□ 0.41
TSPAN4-206ENST00000397408 ZNF222Q9UK12 451 aa17.61■□□□□ 0.41
TSPAN4-206ENST00000397408 IGHV2-70DA0A0C4DH43 119 aa17.6■□□□□ 0.41
TSPAN4-206ENST00000397408 C22orf46C9J442 243 aa17.6■□□□□ 0.41
TSPAN4-206ENST00000397408 J3QLI3 93 aa17.6■□□□□ 0.41
TSPAN4-206ENST00000397408 SPRY1O43609 319 aaPredicted RBP17.6■□□□□ 0.41
TSPAN4-206ENST00000397408 CYB5AP00167 134 aa17.6■□□□□ 0.41
TSPAN4-206ENST00000397408 HSMCR30P0CW71 290 aa17.6■□□□□ 0.41
TSPAN4-206ENST00000397408 PPP3R1P63098 170 aa17.6■□□□□ 0.41
TSPAN4-206ENST00000397408 PAX2Q02962 417 aa17.6■□□□□ 0.41
TSPAN4-206ENST00000397408 TBCEQ15813 527 aaPredicted RBP17.6■□□□□ 0.41
TSPAN4-206ENST00000397408 MKXQ8IYA7 352 aa17.6■□□□□ 0.41
TSPAN4-206ENST00000397408 FGFRL1Q8N441 504 aa17.6■□□□□ 0.41
TSPAN4-206ENST00000397408 INSIG2Q9Y5U4 225 aa17.6■□□□□ 0.41
TSPAN4-206ENST00000397408 LOC105371242A0A075B767 164 aa17.59■□□□□ 0.41
TSPAN4-206ENST00000397408 RFPL4AA6NLU0 287 aa17.59■□□□□ 0.41
TSPAN4-206ENST00000397408 RFPL4AL1F8VTS6 287 aa17.59■□□□□ 0.41
TSPAN4-206ENST00000397408 F8VVB4 439 aa17.59■□□□□ 0.41
TSPAN4-206ENST00000397408 F8VWA3 439 aa17.59■□□□□ 0.41
TSPAN4-206ENST00000397408 SIGLEC5O15389 551 aa17.59■□□□□ 0.41
TSPAN4-206ENST00000397408 MAGEB3O15480 346 aa17.59■□□□□ 0.41
TSPAN4-206ENST00000397408 ANGPTL7O43827 346 aa17.59■□□□□ 0.41
TSPAN4-206ENST00000397408 IL13RA1P78552 427 aa17.59■□□□□ 0.41
TSPAN4-206ENST00000397408 PDZK1IP1Q13113 114 aa17.59■□□□□ 0.41
TSPAN4-206ENST00000397408 KISS1Q15726 138 aa17.59■□□□□ 0.41
TSPAN4-206ENST00000397408 CRIP3Q6Q6R5 217 aa17.59■□□□□ 0.41
TSPAN4-206ENST00000397408 RAB40AQ8WXH6 277 aa17.59■□□□□ 0.41
TSPAN4-206ENST00000397408 UFD1Q92890 307 aa17.59■□□□□ 0.41
TSPAN4-206ENST00000397408 C7orf69Q9H7B7 122 aa17.59■□□□□ 0.41
TSPAN4-206ENST00000397408 TRBV5-7A0A0A0MS05 114 aa17.58■□□□□ 0.41
TSPAN4-206ENST00000397408 ZNF879B4DU55 563 aa17.58■□□□□ 0.41
TSPAN4-206ENST00000397408 NDUFB3O43676 98 aa17.58■□□□□ 0.41
TSPAN4-206ENST00000397408 AVPP01185 164 aa17.58■□□□□ 0.41
TSPAN4-206ENST00000397408 CEBPDP49716 269 aaPredicted RBP17.58■□□□□ 0.41
TSPAN4-206ENST00000397408 DGUOKQ16854 277 aa17.58■□□□□ 0.41
TSPAN4-206ENST00000397408 LRRC10Q5BKY1 277 aa17.58■□□□□ 0.41
TSPAN4-206ENST00000397408 LIPKQ5VXJ0 399 aa17.58■□□□□ 0.41
TSPAN4-206ENST00000397408 BTNL3Q6UXE8 466 aa17.58■□□□□ 0.41
TSPAN4-206ENST00000397408 Q8IYB0 196 aa17.58■□□□□ 0.41
TSPAN4-206ENST00000397408 EMG1Q92979 244 aaKnown RBP17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms