RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 C19orf12Q9NSK7 152 aa8.06□□□□□ -1.12
CAPN3-206ENST00000397163 CUTCQ9NTM9 273 aa8.06□□□□□ -1.12
CAPN3-206ENST00000397163 SCAF4O95104 1147 aaKnown RBP8.05□□□□□ -1.12
CAPN3-206ENST00000397163 DANCRP0C864 163 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 JMJD7P0C870 316 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 FOSL2P15408 326 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 CDAP32320 146 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 CAPZBP47756 277 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 ZP4Q12836 540 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 FZD2Q14332 565 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 RHEBQ15382 184 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 FAM57BQ71RH2 274 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 C5orf24Q7Z6I8 188 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 ZNF664Q8N3J9 261 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 MALSU1Q96EH3 234 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 S100A13Q99584 98 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 PBDC1Q9BVG4 233 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 PLEKHA2Q9HB19 425 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.05□□□□□ -1.12
CAPN3-206ENST00000397163 SLCO1B1Q9Y6L6 691 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 PCNX3Q9H6A9 2034 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 A0A087WZY1 265 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 SPTY2D1-AS1A0A0U1RR47 76 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 TCRBV21S2A2A0A5A6 115 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 H0YL77 283 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 XRCC2O43543 280 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 HPNP05981 417 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 NPSP0C0P6 89 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 TRGC1P0CF51 173 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 TAGLN2P37802 199 aaKnown RBP8.05□□□□□ -1.12
CAPN3-206ENST00000397163 CLRN1P58418 232 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 CARD17Q5XLA6 110 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 TMEM92Q6UXU6 159 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 C16orf47Q6ZP98 133 aaPredicted RBP8.05□□□□□ -1.12
CAPN3-206ENST00000397163 ZNF283Q8N7M2 679 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 HSD17B11Q8NBQ5 300 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 GALNT14Q96FL9 552 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 GNRHR2Q96P88 292 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 MOB1AQ9H8S9 216 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 CBLN4Q9NTU7 201 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 ZNF319Q9P2F9 582 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 OR14J1Q9UGF5 321 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 IL17BQ9UHF5 180 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 TDRD6O60522 2096 aaKnown RBP8.05□□□□□ -1.12
CAPN3-206ENST00000397163 C2orf16Q68DN1 1984 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 SMCO3A2RU48 225 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 SHISA8B8ZZ34 492 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 E5RGE8 158 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 DIRAS3O95661 229 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 SEC11BP0C7V7 166 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 GABRA4P48169 554 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 UBE2V2Q15819 145 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 C1QL2Q7Z5L3 287 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 FRZBQ92765 325 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 MUCL1Q96DR8 90 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 DDA1Q9BW61 102 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 PECRQ9BY49 303 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 TPSD1Q9BZJ3 242 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 SLC35B3Q9H1N7 401 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 LMAN1LQ9HAT1 526 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 SUSD2Q9UGT4 822 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 NSG2Q9Y328 171 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 LHFPL6Q9Y693 200 aa8.05□□□□□ -1.12
CAPN3-206ENST00000397163 RP1P56715 2156 aa8.04□□□□□ -1.12
CAPN3-206ENST00000397163 IGKV3D-11A0A0A0MRZ8 115 aa8.04□□□□□ -1.12
CAPN3-206ENST00000397163 IFNL4K9M1U5 179 aa8.04□□□□□ -1.12
CAPN3-206ENST00000397163 RER1O15258 196 aa8.04□□□□□ -1.12
CAPN3-206ENST00000397163 BCAT2O15382 392 aaPredicted RBP8.04□□□□□ -1.12
CAPN3-206ENST00000397163 OPN1LWP04000 364 aa8.04□□□□□ -1.12
CAPN3-206ENST00000397163 CTHP32929 405 aa8.04□□□□□ -1.12
CAPN3-206ENST00000397163 CD200P41217 278 aa8.04□□□□□ -1.12
CAPN3-206ENST00000397163 AFF3P51826 1226 aaKnown RBP8.04□□□□□ -1.12
CAPN3-206ENST00000397163 GABREP78334 506 aa8.04□□□□□ -1.12
CAPN3-206ENST00000397163 RPP30P78346 268 aaKnown RBP8.04□□□□□ -1.12
CAPN3-206ENST00000397163 SLC35A1P78382 337 aa8.04□□□□□ -1.12
CAPN3-206ENST00000397163 NHLH2Q02577 135 aa8.04□□□□□ -1.12
CAPN3-206ENST00000397163 SP6Q3SY56 376 aa8.04□□□□□ -1.12
CAPN3-206ENST00000397163 SOHLH1Q5JUK2 328 aa8.04□□□□□ -1.12
CAPN3-206ENST00000397163 TOMM40LQ969M1 308 aa8.04□□□□□ -1.12
CAPN3-206ENST00000397163 RIMS4Q9H426 269 aaPredicted RBP8.04□□□□□ -1.12
CAPN3-206ENST00000397163 SERINC1Q9NRX5 453 aa8.04□□□□□ -1.12
CAPN3-206ENST00000397163 TUBD1Q9UJT1 453 aa8.04□□□□□ -1.12
CAPN3-206ENST00000397163 CHD3Q12873 2000 aaKnown RBP8.04□□□□□ -1.12
CAPN3-206ENST00000397163 IGKV1D-8A0A087WSZ0 117 aa8.04□□□□□ -1.12
CAPN3-206ENST00000397163 IGKV1-9A0A0C4DH69 117 aa8.04□□□□□ -1.12
CAPN3-206ENST00000397163 A8MWP6 167 aa8.04□□□□□ -1.12
CAPN3-206ENST00000397163 ANOS1P23352 680 aa8.04□□□□□ -1.12
CAPN3-206ENST00000397163 FBXW4P57775 412 aa8.04□□□□□ -1.12
CAPN3-206ENST00000397163 RAB1AP62820 205 aa8.04□□□□□ -1.12
CAPN3-206ENST00000397163 ELOBQ15370 118 aa8.04□□□□□ -1.12
CAPN3-206ENST00000397163 KISS1Q15726 138 aa8.04□□□□□ -1.12
CAPN3-206ENST00000397163 DOK3Q7L591 496 aa8.04□□□□□ -1.12
CAPN3-206ENST00000397163 SUMF2Q8NBJ7 301 aa8.04□□□□□ -1.12
CAPN3-206ENST00000397163 FAM213BQ8TBF2 198 aa8.04□□□□□ -1.12
CAPN3-206ENST00000397163 DDIT4LQ96D03 193 aa8.04□□□□□ -1.12
CAPN3-206ENST00000397163 RAB39BQ96DA2 213 aa8.04□□□□□ -1.12
CAPN3-206ENST00000397163 LRRC61Q9BV99 259 aa8.04□□□□□ -1.12
CAPN3-206ENST00000397163 SCRT1Q9BWW7 348 aa8.04□□□□□ -1.12
CAPN3-206ENST00000397163 WFDC1Q9HC57 220 aa8.04□□□□□ -1.12
CAPN3-206ENST00000397163 PADI1Q9ULC6 663 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms