RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 DNAJC8O75937 253 aaPredicted RBP11.89□□□□□ -0.51
SEC13-206ENST00000397102 OR2F2O95006 317 aa11.89□□□□□ -0.51
SEC13-206ENST00000397102 HTR1DP28221 377 aa11.89□□□□□ -0.51
SEC13-206ENST00000397102 SLC6A1P30531 599 aa11.89□□□□□ -0.51
SEC13-206ENST00000397102 BRS3P32247 399 aa11.89□□□□□ -0.51
SEC13-206ENST00000397102 MYCNOSP40205 109 aa11.89□□□□□ -0.51
SEC13-206ENST00000397102 HMGA2P52926 109 aa11.89□□□□□ -0.51
SEC13-206ENST00000397102 PSME3P61289 254 aa11.89□□□□□ -0.51
SEC13-206ENST00000397102 RIPPLY1Q0D2K3 151 aa11.89□□□□□ -0.51
SEC13-206ENST00000397102 ZBTB49Q6ZSB9 765 aa11.89□□□□□ -0.51
SEC13-206ENST00000397102 TCF23Q7RTU1 214 aa11.89□□□□□ -0.51
SEC13-206ENST00000397102 TRPM8Q7Z2W7 1104 aa11.89□□□□□ -0.51
SEC13-206ENST00000397102 ZNF573Q86YE8 665 aa11.89□□□□□ -0.51
SEC13-206ENST00000397102 ZNF676Q8N7Q3 588 aa11.89□□□□□ -0.51
SEC13-206ENST00000397102 ZNF454Q8N9F8 522 aa11.89□□□□□ -0.51
SEC13-206ENST00000397102 ASCC1Q8N9N2 400 aaKnown RBP11.89□□□□□ -0.51
SEC13-206ENST00000397102 THEM6Q8WUY1 208 aa11.89□□□□□ -0.51
SEC13-206ENST00000397102 RBM14Q96PK6 669 aaKnown RBP11.89□□□□□ -0.51
SEC13-206ENST00000397102 CLEC7AQ9BXN2 247 aa11.89□□□□□ -0.51
SEC13-206ENST00000397102 MED20Q9H944 212 aa11.89□□□□□ -0.51
SEC13-206ENST00000397102 IL1RAPQ9NPH3 570 aa11.89□□□□□ -0.51
SEC13-206ENST00000397102 CMC2Q9NRP2 79 aa11.89□□□□□ -0.51
SEC13-206ENST00000397102 ARMC1Q9NVT9 282 aa11.89□□□□□ -0.51
SEC13-206ENST00000397102 VNN3Q9NY84 501 aa11.89□□□□□ -0.51
SEC13-206ENST00000397102 SLC22A13Q9Y226 551 aa11.89□□□□□ -0.51
SEC13-206ENST00000397102 LYVE1Q9Y5Y7 322 aa11.89□□□□□ -0.51
SEC13-206ENST00000397102 SH2D7A6NKC9 451 aaPredicted RBP11.88□□□□□ -0.51
SEC13-206ENST00000397102 FAM183AA6NL82 134 aa11.88□□□□□ -0.51
SEC13-206ENST00000397102 ZNF737O75373 536 aa11.88□□□□□ -0.51
SEC13-206ENST00000397102 KRT36O76013 467 aa11.88□□□□□ -0.51
SEC13-206ENST00000397102 GASTP01350 101 aa11.88□□□□□ -0.51
SEC13-206ENST00000397102 AMY1AP04745 511 aa11.88□□□□□ -0.51
SEC13-206ENST00000397102 AMY2AP04746 511 aa11.88□□□□□ -0.51
SEC13-206ENST00000397102 CD24P25063 80 aa11.88□□□□□ -0.51
SEC13-206ENST00000397102 MEF2CQ06413 473 aaPredicted RBP11.88□□□□□ -0.51
SEC13-206ENST00000397102 ZNF684Q5T5D7 378 aa11.88□□□□□ -0.51
SEC13-206ENST00000397102 LCN1P1Q5VSP4 162 aa11.88□□□□□ -0.51
SEC13-206ENST00000397102 GDPD3Q7L5L3 318 aa11.88□□□□□ -0.51
SEC13-206ENST00000397102 BATF2Q8N1L9 274 aa11.88□□□□□ -0.51
SEC13-206ENST00000397102 OR4P4Q8NGL7 312 aa11.88□□□□□ -0.51
SEC13-206ENST00000397102 STMN2Q93045 179 aa11.88□□□□□ -0.51
SEC13-206ENST00000397102 P2RX4Q99571 388 aa11.88□□□□□ -0.51
SEC13-206ENST00000397102 ASCL2Q99929 193 aa11.88□□□□□ -0.51
SEC13-206ENST00000397102 TMEM133Q9H2Q1 129 aa11.88□□□□□ -0.51
SEC13-206ENST00000397102 SPAG4Q9NPE6 437 aa11.88□□□□□ -0.51
SEC13-206ENST00000397102 ENPP5Q9UJA9 477 aa11.88□□□□□ -0.51
SEC13-206ENST00000397102 hADV38S2A0JD32 116 aa11.87□□□□□ -0.51
SEC13-206ENST00000397102 ACOD1A6NK06 481 aa11.87□□□□□ -0.51
SEC13-206ENST00000397102 GSC2O15499 205 aa11.87□□□□□ -0.51
SEC13-206ENST00000397102 SOX14O95416 240 aa11.87□□□□□ -0.51
SEC13-206ENST00000397102 NRASP01111 189 aa11.87□□□□□ -0.51
SEC13-206ENST00000397102 ARHGDIBP52566 201 aa11.87□□□□□ -0.51
SEC13-206ENST00000397102 GP2P55259 537 aaKnown RBP11.87□□□□□ -0.51
SEC13-206ENST00000397102 C9orf152Q5JTZ5 239 aa11.87□□□□□ -0.51
SEC13-206ENST00000397102 KCTD18Q6PI47 426 aaPredicted RBP11.87□□□□□ -0.51
SEC13-206ENST00000397102 C8orf86Q6ZUL3 223 aa11.87□□□□□ -0.51
SEC13-206ENST00000397102 OR2W3Q7Z3T1 314 aa11.87□□□□□ -0.51
SEC13-206ENST00000397102 COMMD2Q86X83 199 aa11.87□□□□□ -0.51
SEC13-206ENST00000397102 OR8H2Q8N162 312 aa11.87□□□□□ -0.51
SEC13-206ENST00000397102 RNF148Q8N7C7 305 aa11.87□□□□□ -0.51
SEC13-206ENST00000397102 Q8NFD4 153 aa11.87□□□□□ -0.51
SEC13-206ENST00000397102 BCAS4Q8TDM0 211 aa11.87□□□□□ -0.51
SEC13-206ENST00000397102 DPM3Q9P2X0 92 aa11.87□□□□□ -0.51
SEC13-206ENST00000397102 MAGEL2Q9UJ55 1249 aa11.87□□□□□ -0.51
SEC13-206ENST00000397102 PIGLQ9Y2B2 252 aa11.87□□□□□ -0.51
SEC13-206ENST00000397102 LINC00312Q9Y6C7 94 aa11.87□□□□□ -0.51
SEC13-206ENST00000397102 LCE6AA0A183 80 aa11.86□□□□□ -0.51
SEC13-206ENST00000397102 NUDT19A8MXV4 375 aa11.86□□□□□ -0.51
SEC13-206ENST00000397102 M0QZK8 103 aa11.86□□□□□ -0.51
SEC13-206ENST00000397102 TNFRSF11BO00300 401 aa11.86□□□□□ -0.51
SEC13-206ENST00000397102 SELENOFO60613 162 aa11.86□□□□□ -0.51
SEC13-206ENST00000397102 CCNB2O95067 398 aa11.86□□□□□ -0.51
SEC13-206ENST00000397102 IGLV3-1P01715 115 aa11.86□□□□□ -0.51
SEC13-206ENST00000397102 MPZP25189 248 aa11.86□□□□□ -0.51
SEC13-206ENST00000397102 ERVK11-1P61568 191 aa11.86□□□□□ -0.51
SEC13-206ENST00000397102 C18orf65Q6ZTR6 163 aa11.86□□□□□ -0.51
SEC13-206ENST00000397102 KRT77Q7Z794 578 aa11.86□□□□□ -0.51
SEC13-206ENST00000397102 ZNF329Q86UD4 541 aa11.86□□□□□ -0.51
SEC13-206ENST00000397102 AQP11Q8NBQ7 271 aa11.86□□□□□ -0.51
SEC13-206ENST00000397102 OTULINQ96BN8 352 aa11.86□□□□□ -0.51
SEC13-206ENST00000397102 PRR25Q96S07 402 aa11.86□□□□□ -0.51
SEC13-206ENST00000397102 OR51V1Q9H2C8 321 aa11.86□□□□□ -0.51
SEC13-206ENST00000397102 ZFP57Q9NU63 452 aa11.86□□□□□ -0.51
SEC13-206ENST00000397102 FAM206AQ9NX38 181 aa11.86□□□□□ -0.51
SEC13-206ENST00000397102 HHLA2Q9UM44 414 aa11.86□□□□□ -0.51
SEC13-206ENST00000397102 KLHDC2Q9Y2U9 406 aa11.86□□□□□ -0.51
SEC13-206ENST00000397102 DNAH7Q8WXX0 4024 aa11.85□□□□□ -0.51
SEC13-206ENST00000397102 PQLC2LA1A4F0 135 aa11.85□□□□□ -0.51
SEC13-206ENST00000397102 H2AFXP16104 143 aaPredicted RBP11.85□□□□□ -0.51
SEC13-206ENST00000397102 CHATP28329 748 aa11.85□□□□□ -0.51
SEC13-206ENST00000397102 PLBD1Q6P4A8 553 aa11.85□□□□□ -0.51
SEC13-206ENST00000397102 KLHL30-AS1Q8NEE0 82 aa11.85□□□□□ -0.51
SEC13-206ENST00000397102 OR51E1Q8TCB6 317 aa11.85□□□□□ -0.51
SEC13-206ENST00000397102 SNX22Q96L94 193 aa11.85□□□□□ -0.51
SEC13-206ENST00000397102 NSMCE2Q96MF7 247 aa11.85□□□□□ -0.51
SEC13-206ENST00000397102 GPR84Q9NQS5 396 aa11.85□□□□□ -0.51
SEC13-206ENST00000397102 PAPOLBQ9NRJ5 636 aaKnown RBP11.85□□□□□ -0.51
SEC13-206ENST00000397102 HUWE1Q7Z6Z7 4374 aaKnown RBP11.84□□□□□ -0.51
SEC13-206ENST00000397102 TMEM269A0A1B0GVZ9 245 aa11.84□□□□□ -0.51
SEC13-206ENST00000397102 PSMD9O00233 223 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms