RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 DUX4L2P0CJ85 424 aa13.79□□□□□ -0.2
CXCL1-201ENST00000395761 DUX4L3P0CJ86 424 aa13.79□□□□□ -0.2
CXCL1-201ENST00000395761 DUX4L4P0CJ87 422 aa13.79□□□□□ -0.2
CXCL1-201ENST00000395761 DUX4L5P0CJ88 424 aa13.79□□□□□ -0.2
CXCL1-201ENST00000395761 DUX4L6P0CJ89 424 aa13.79□□□□□ -0.2
CXCL1-201ENST00000395761 DUX4L7P0CJ90 424 aa13.79□□□□□ -0.2
CXCL1-201ENST00000395761 MUC1P15941 1255 aaPredicted RBP13.79□□□□□ -0.2
CXCL1-201ENST00000395761 AMY2BP19961 511 aa13.79□□□□□ -0.2
CXCL1-201ENST00000395761 GLRA1P23415 457 aa13.79□□□□□ -0.2
CXCL1-201ENST00000395761 MPZP25189 248 aa13.79□□□□□ -0.2
CXCL1-201ENST00000395761 AZGP1P25311 298 aaKnown RBP13.79□□□□□ -0.2
CXCL1-201ENST00000395761 FGF9P31371 208 aaPredicted RBP13.79□□□□□ -0.2
CXCL1-201ENST00000395761 PITPNBP48739 271 aa13.79□□□□□ -0.2
CXCL1-201ENST00000395761 FABP5Q01469 135 aa13.79□□□□□ -0.2
CXCL1-201ENST00000395761 CNN3Q15417 329 aaKnown RBP13.79□□□□□ -0.2
CXCL1-201ENST00000395761 KCNJ8Q15842 424 aa13.79□□□□□ -0.2
CXCL1-201ENST00000395761 CR1LQ2VPA4 569 aa13.79□□□□□ -0.2
CXCL1-201ENST00000395761 ESCO2Q56NI9 601 aa13.79□□□□□ -0.2
CXCL1-201ENST00000395761 FAM120AOSQ5T036 256 aa13.79□□□□□ -0.2
CXCL1-201ENST00000395761 DUX4L9Q6RFH8 374 aaPredicted RBP13.79□□□□□ -0.2
CXCL1-201ENST00000395761 IL17RELQ6ZVW7 336 aa13.79□□□□□ -0.2
CXCL1-201ENST00000395761 PARP16Q8N5Y8 322 aa13.79□□□□□ -0.2
CXCL1-201ENST00000395761 OR8B3Q8NGG8 313 aa13.79□□□□□ -0.2
CXCL1-201ENST00000395761 BORCS8Q96FH0 119 aa13.79□□□□□ -0.2
CXCL1-201ENST00000395761 OR8B2Q96RD0 313 aa13.79□□□□□ -0.2
CXCL1-201ENST00000395761 CCL13Q99616 98 aa13.79□□□□□ -0.2
CXCL1-201ENST00000395761 MMP26Q9NRE1 261 aa13.79□□□□□ -0.2
CXCL1-201ENST00000395761 DUX4Q9UBX2 424 aa13.79□□□□□ -0.2
CXCL1-201ENST00000395761 STUB1Q9UNE7 303 aa13.79□□□□□ -0.2
CXCL1-201ENST00000395761 ZFHX3Q15911 3703 aa13.79□□□□□ -0.2
CXCL1-201ENST00000395761 ARHGAP32A7KAX9 2087 aa13.78□□□□□ -0.2
CXCL1-201ENST00000395761 CRLF1O75462 422 aa13.78□□□□□ -0.2
CXCL1-201ENST00000395761 FCN3O75636 299 aa13.78□□□□□ -0.2
CXCL1-201ENST00000395761 GPX5O75715 221 aa13.78□□□□□ -0.2
CXCL1-201ENST00000395761 RGS9O75916 674 aaPredicted RBP13.78□□□□□ -0.2
CXCL1-201ENST00000395761 PLATP00750 562 aa13.78□□□□□ -0.2
CXCL1-201ENST00000395761 CD2P06729 351 aa13.78□□□□□ -0.2
CXCL1-201ENST00000395761 PGA5P0DJD9 388 aa13.78□□□□□ -0.2
CXCL1-201ENST00000395761 HOXB4P17483 251 aaPredicted RBP13.78□□□□□ -0.2
CXCL1-201ENST00000395761 PRKACBP22694 351 aa13.78□□□□□ -0.2
CXCL1-201ENST00000395761 CPT2P23786 658 aa13.78□□□□□ -0.2
CXCL1-201ENST00000395761 MAPK3P27361 379 aaPredicted RBP13.78□□□□□ -0.2
CXCL1-201ENST00000395761 MTCP1P56278 107 aa13.78□□□□□ -0.2
CXCL1-201ENST00000395761 TIMM50Q3ZCQ8 353 aa13.78□□□□□ -0.2
CXCL1-201ENST00000395761 ASPHD2Q6ICH7 369 aa13.78□□□□□ -0.2
CXCL1-201ENST00000395761 FAHD2BQ6P2I3 314 aaPredicted RBP13.78□□□□□ -0.2
CXCL1-201ENST00000395761 NLRC3Q7RTR2 1065 aa13.78□□□□□ -0.2
CXCL1-201ENST00000395761 ANKRD13BQ86YJ7 626 aa13.78□□□□□ -0.2
CXCL1-201ENST00000395761 SERPINA12Q8IW75 414 aa13.78□□□□□ -0.2
CXCL1-201ENST00000395761 POC1AQ8NBT0 407 aa13.78□□□□□ -0.2
CXCL1-201ENST00000395761 DNAAF1Q8NEP3 725 aa13.78□□□□□ -0.2
CXCL1-201ENST00000395761 ORAI1Q96D31 301 aa13.78□□□□□ -0.2
CXCL1-201ENST00000395761 FAHD2AQ96GK7 314 aa13.78□□□□□ -0.2
CXCL1-201ENST00000395761 DERL3Q96Q80 235 aa13.78□□□□□ -0.2
CXCL1-201ENST00000395761 SPACA5Q96QH8 159 aa13.78□□□□□ -0.2
CXCL1-201ENST00000395761 FUNDC2Q9BWH2 189 aa13.78□□□□□ -0.2
CXCL1-201ENST00000395761 SSBP3Q9BWW4 388 aaPredicted RBP13.78□□□□□ -0.2
CXCL1-201ENST00000395761 PKIBQ9C010 78 aa13.78□□□□□ -0.2
CXCL1-201ENST00000395761 SMURF1Q9HCE7 757 aa13.78□□□□□ -0.2
CXCL1-201ENST00000395761 TMEM160Q9NX00 188 aa13.78□□□□□ -0.2
CXCL1-201ENST00000395761 DNAJB11Q9UBS4 358 aa13.78□□□□□ -0.2
CXCL1-201ENST00000395761 SSR3Q9UNL2 185 aa13.78□□□□□ -0.2
CXCL1-201ENST00000395761 POLR3KQ9Y2Y1 108 aaPredicted RBP13.78□□□□□ -0.2
CXCL1-201ENST00000395761 A8MXK9 166 aa13.77□□□□□ -0.21
CXCL1-201ENST00000395761 F8VVB4 439 aa13.77□□□□□ -0.21
CXCL1-201ENST00000395761 F8VWA3 439 aa13.77□□□□□ -0.21
CXCL1-201ENST00000395761 GABRPO00591 440 aa13.77□□□□□ -0.21
CXCL1-201ENST00000395761 NDUFA2O43678 99 aa13.77□□□□□ -0.21
CXCL1-201ENST00000395761 NOS1APO75052 506 aaPredicted RBP13.77□□□□□ -0.21
CXCL1-201ENST00000395761 ALX3O95076 343 aa13.77□□□□□ -0.21
CXCL1-201ENST00000395761 UCHL1P09936 223 aa13.77□□□□□ -0.21
CXCL1-201ENST00000395761 GADD45AP24522 165 aa13.77□□□□□ -0.21
CXCL1-201ENST00000395761 RBP2P50120 134 aa13.77□□□□□ -0.21
CXCL1-201ENST00000395761 ATP1B3P54709 279 aa13.77□□□□□ -0.21
CXCL1-201ENST00000395761 GNB2P62879 340 aa13.77□□□□□ -0.21
CXCL1-201ENST00000395761 IL24Q13007 206 aa13.77□□□□□ -0.21
CXCL1-201ENST00000395761 WDR25Q64LD2 544 aaPredicted RBP13.77□□□□□ -0.21
CXCL1-201ENST00000395761 STUMQ69YW2 141 aa13.77□□□□□ -0.21
CXCL1-201ENST00000395761 CRIP3Q6Q6R5 217 aa13.77□□□□□ -0.21
CXCL1-201ENST00000395761 CEACAM19Q7Z692 300 aa13.77□□□□□ -0.21
CXCL1-201ENST00000395761 SATL1Q86VE3 508 aa13.77□□□□□ -0.21
CXCL1-201ENST00000395761 FGFRL1Q8N441 504 aa13.77□□□□□ -0.21
CXCL1-201ENST00000395761 PIP4P2Q8N4L2 257 aa13.77□□□□□ -0.21
CXCL1-201ENST00000395761 OR5D14Q8NGL3 314 aa13.77□□□□□ -0.21
CXCL1-201ENST00000395761 ANGPTL6Q8NI99 470 aa13.77□□□□□ -0.21
CXCL1-201ENST00000395761 TMEM106AQ96A25 262 aa13.77□□□□□ -0.21
CXCL1-201ENST00000395761 SPSB1Q96BD6 273 aa13.77□□□□□ -0.21
CXCL1-201ENST00000395761 C12orf43Q96C57 262 aaKnown RBP13.77□□□□□ -0.21
CXCL1-201ENST00000395761 OR14A2Q96R54 314 aa13.77□□□□□ -0.21
CXCL1-201ENST00000395761 OR51E2Q9H255 320 aa13.77□□□□□ -0.21
CXCL1-201ENST00000395761 TAS2R4Q9NYW5 299 aa13.77□□□□□ -0.21
CXCL1-201ENST00000395761 MTCH1Q9NZJ7 389 aa13.77□□□□□ -0.21
CXCL1-201ENST00000395761 NLKQ9UBE8 527 aa13.77□□□□□ -0.21
CXCL1-201ENST00000395761 CLN8Q9UBY8 286 aa13.77□□□□□ -0.21
CXCL1-201ENST00000395761 SVEP1Q4LDE5 3571 aa13.77□□□□□ -0.21
CXCL1-201ENST00000395761 TMPRSS2O15393 492 aa13.76□□□□□ -0.21
CXCL1-201ENST00000395761 PIN1P1O15428 100 aa13.76□□□□□ -0.21
CXCL1-201ENST00000395761 AVPP01185 164 aa13.76□□□□□ -0.21
CXCL1-201ENST00000395761 OCMP0CE72 109 aaPredicted RBP13.76□□□□□ -0.21
CXCL1-201ENST00000395761 ERVK11-1P61568 191 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms