RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 FAM76BQ5HYJ3 339 aa16■□□□□ 0.15
PCDHA1-202ENST00000394633 C10orf128Q5T292 105 aa16■□□□□ 0.15
PCDHA1-202ENST00000394633 RPUSD3Q6P087 351 aaKnown RBP16■□□□□ 0.15
PCDHA1-202ENST00000394633 OPN5Q6U736 354 aa16■□□□□ 0.15
PCDHA1-202ENST00000394633 ETV3LQ6ZN32 361 aa16■□□□□ 0.15
PCDHA1-202ENST00000394633 LYPD6BQ8NI32 183 aa16■□□□□ 0.15
PCDHA1-202ENST00000394633 Q96M66 194 aa16■□□□□ 0.15
PCDHA1-202ENST00000394633 SPSB2Q99619 263 aa16■□□□□ 0.15
PCDHA1-202ENST00000394633 DECR2Q9NUI1 292 aa16■□□□□ 0.15
PCDHA1-202ENST00000394633 ASPMQ8IZT6 3477 aa16■□□□□ 0.15
PCDHA1-202ENST00000394633 FOXL2NBQ6ZUU3 175 aa16■□□□□ 0.15
PCDHA1-202ENST00000394633 TMEM54Q969K7 222 aa16■□□□□ 0.15
PCDHA1-202ENST00000394633 ERGIC1Q969X5 290 aa16■□□□□ 0.15
PCDHA1-202ENST00000394633 CCDC74BQ96LY2 380 aa16■□□□□ 0.15
PCDHA1-202ENST00000394633 CRB3Q9BUF7 120 aa16■□□□□ 0.15
PCDHA1-202ENST00000394633 RNF122Q9H9V4 155 aa16■□□□□ 0.15
PCDHA1-202ENST00000394633 ANXA10Q9UJ72 324 aa16■□□□□ 0.15
PCDHA1-202ENST00000394633 PADI1Q9ULC6 663 aa16■□□□□ 0.15
PCDHA1-202ENST00000394633 POMT1Q9Y6A1 747 aa16■□□□□ 0.15
PCDHA1-202ENST00000394633 IFNA21P01568 189 aa15.99■□□□□ 0.15
PCDHA1-202ENST00000394633 OTX1P32242 354 aaPredicted RBP15.99■□□□□ 0.15
PCDHA1-202ENST00000394633 EIF1P41567 113 aaKnown RBP15.99■□□□□ 0.15
PCDHA1-202ENST00000394633 GUCA1AP43080 201 aaPredicted RBP15.99■□□□□ 0.15
PCDHA1-202ENST00000394633 HIST1H3AP68431 136 aa15.99■□□□□ 0.15
PCDHA1-202ENST00000394633 H3F3AP84243 136 aa15.99■□□□□ 0.15
PCDHA1-202ENST00000394633 HIST2H3PS2Q5TEC6 136 aa15.99■□□□□ 0.15
PCDHA1-202ENST00000394633 ZNF385CQ66K41 422 aaPredicted RBP15.99■□□□□ 0.15
PCDHA1-202ENST00000394633 HIST2H3AQ71DI3 136 aa15.99■□□□□ 0.15
PCDHA1-202ENST00000394633 BSCL2Q96G97 398 aaPredicted RBP15.99■□□□□ 0.15
PCDHA1-202ENST00000394633 AKR1E2Q96JD6 320 aa15.99■□□□□ 0.15
PCDHA1-202ENST00000394633 ZNF385AQ96PM9 386 aaKnown RBP15.99■□□□□ 0.15
PCDHA1-202ENST00000394633 CACFD1Q9UGQ2 172 aa15.99■□□□□ 0.15
PCDHA1-202ENST00000394633 MUC6Q6W4X9 2439 aa15.99■□□□□ 0.15
PCDHA1-202ENST00000394633 IGHV3-15A0A0B4J1V0 119 aa15.99■□□□□ 0.15
PCDHA1-202ENST00000394633 SCGB1D2O95969 90 aa15.99■□□□□ 0.15
PCDHA1-202ENST00000394633 TMEM225BP0DP42 221 aa15.99■□□□□ 0.15
PCDHA1-202ENST00000394633 ZNF133P52736 654 aaPredicted RBP15.99■□□□□ 0.15
PCDHA1-202ENST00000394633 FAM3AP98173 230 aa15.99■□□□□ 0.15
PCDHA1-202ENST00000394633 CLEC9AQ6UXN8 241 aa15.99■□□□□ 0.15
PCDHA1-202ENST00000394633 SFT2D1Q8WV19 159 aa15.99■□□□□ 0.15
PCDHA1-202ENST00000394633 SECTM1Q8WVN6 248 aa15.99■□□□□ 0.15
PCDHA1-202ENST00000394633 LOXL4Q96JB6 756 aa15.99■□□□□ 0.15
PCDHA1-202ENST00000394633 DEFB126Q9BYW3 111 aa15.99■□□□□ 0.15
PCDHA1-202ENST00000394633 PARP12Q9H0J9 701 aaKnown RBP15.99■□□□□ 0.15
PCDHA1-202ENST00000394633 GPR173Q9NS66 373 aa15.99■□□□□ 0.15
PCDHA1-202ENST00000394633 ZNF581Q9P0T4 197 aa15.99■□□□□ 0.15
PCDHA1-202ENST00000394633 CHCHD2Q9Y6H1 151 aaPredicted RBP15.99■□□□□ 0.15
PCDHA1-202ENST00000394633 M0R135 149 aa15.98■□□□□ 0.15
PCDHA1-202ENST00000394633 TOX3O15405 576 aaPredicted RBP15.98■□□□□ 0.15
PCDHA1-202ENST00000394633 OR5H8P0DN80 308 aa15.98■□□□□ 0.15
PCDHA1-202ENST00000394633 FOLR2P14207 255 aa15.98■□□□□ 0.15
PCDHA1-202ENST00000394633 HABP2Q14520 560 aaPredicted RBP15.98■□□□□ 0.15
PCDHA1-202ENST00000394633 SNAI3Q3KNW1 292 aa15.98■□□□□ 0.15
PCDHA1-202ENST00000394633 AKIRIN2Q53H80 203 aa15.98■□□□□ 0.15
PCDHA1-202ENST00000394633 ZNF799Q96GE5 643 aa15.98■□□□□ 0.15
PCDHA1-202ENST00000394633 FAAP24Q9BTP7 215 aa15.98■□□□□ 0.15
PCDHA1-202ENST00000394633 SMCO4Q9NRQ5 59 aa15.98■□□□□ 0.15
PCDHA1-202ENST00000394633 TIMM10BQ9Y5J6 103 aa15.98■□□□□ 0.15
PCDHA1-202ENST00000394633 CD63P08962 238 aa15.98■□□□□ 0.15
PCDHA1-202ENST00000394633 NR2C1P13056 603 aa15.98■□□□□ 0.15
PCDHA1-202ENST00000394633 MEOX2P50222 304 aa15.98■□□□□ 0.15
PCDHA1-202ENST00000394633 RRADP55042 308 aa15.98■□□□□ 0.15
PCDHA1-202ENST00000394633 SWI5Q1ZZU3 235 aa15.98■□□□□ 0.15
PCDHA1-202ENST00000394633 UBAC2Q8NBM4 344 aa15.98■□□□□ 0.15
PCDHA1-202ENST00000394633 OR9K2Q8NGE7 335 aa15.98■□□□□ 0.15
PCDHA1-202ENST00000394633 USB1Q9BQ65 265 aaKnown RBP15.98■□□□□ 0.15
PCDHA1-202ENST00000394633 ARV1Q9H2C2 271 aa15.98■□□□□ 0.15
PCDHA1-202ENST00000394633 PLEKHA2Q9HB19 425 aa15.98■□□□□ 0.15
PCDHA1-202ENST00000394633 AK3Q9UIJ7 227 aa15.98■□□□□ 0.15
PCDHA1-202ENST00000394633 CDX4O14627 284 aaPredicted RBP15.97■□□□□ 0.15
PCDHA1-202ENST00000394633 ANGPTL7O43827 346 aa15.97■□□□□ 0.15
PCDHA1-202ENST00000394633 MBPP02686 304 aaPredicted RBP15.97■□□□□ 0.15
PCDHA1-202ENST00000394633 IFNA4P05014 189 aa15.97■□□□□ 0.15
PCDHA1-202ENST00000394633 FKBP2P26885 142 aaKnown RBP15.97■□□□□ 0.15
PCDHA1-202ENST00000394633 AKR1C3P42330 323 aa15.97■□□□□ 0.15
PCDHA1-202ENST00000394633 PIGPP57054 158 aa15.97■□□□□ 0.15
PCDHA1-202ENST00000394633 B2MP61769 119 aa15.97■□□□□ 0.15
PCDHA1-202ENST00000394633 HGFACQ04756 655 aa15.97■□□□□ 0.15
PCDHA1-202ENST00000394633 SP6Q3SY56 376 aa15.97■□□□□ 0.15
PCDHA1-202ENST00000394633 CLCC1Q96S66 551 aa15.97■□□□□ 0.15
PCDHA1-202ENST00000394633 RBM24Q9BX46 236 aaKnown RBP15.97■□□□□ 0.15
PCDHA1-202ENST00000394633 IFT22Q9H7X7 185 aa15.97■□□□□ 0.15
PCDHA1-202ENST00000394633 KPTNQ9Y664 436 aa15.97■□□□□ 0.15
PCDHA1-202ENST00000394633 DHHO43323 396 aa15.96■□□□□ 0.15
PCDHA1-202ENST00000394633 ZNF205O95201 554 aa15.96■□□□□ 0.15
PCDHA1-202ENST00000394633 PAX6P26367 422 aa15.96■□□□□ 0.15
PCDHA1-202ENST00000394633 OPRM1P35372 400 aa15.96■□□□□ 0.15
PCDHA1-202ENST00000394633 PLXDC2Q6UX71 529 aa15.96■□□□□ 0.15
PCDHA1-202ENST00000394633 DBX2Q6ZNG2 339 aa15.96■□□□□ 0.15
PCDHA1-202ENST00000394633 TMEM123Q8N131 208 aa15.96■□□□□ 0.15
PCDHA1-202ENST00000394633 SGK3Q96BR1 496 aa15.96■□□□□ 0.15
PCDHA1-202ENST00000394633 C10orf35Q96D05 121 aa15.96■□□□□ 0.15
PCDHA1-202ENST00000394633 C14orf79Q96F83 325 aa15.96■□□□□ 0.15
PCDHA1-202ENST00000394633 UCN2Q96RP3 112 aa15.96■□□□□ 0.15
PCDHA1-202ENST00000394633 EGLN1Q9GZT9 426 aa15.96■□□□□ 0.15
PCDHA1-202ENST00000394633 PLEK2Q9NYT0 353 aa15.96■□□□□ 0.15
PCDHA1-202ENST00000394633 FBXO9Q9UK97 447 aaPredicted RBP15.96■□□□□ 0.15
PCDHA1-202ENST00000394633 RARRES3Q9UL19 164 aa15.96■□□□□ 0.15
PCDHA1-202ENST00000394633 EDARQ9UNE0 448 aa15.96■□□□□ 0.15
PCDHA1-202ENST00000394633 STARD10Q9Y365 291 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms