RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 SPINK14Q6IE38 97 aa17.04■□□□□ 0.32
RCCD1-201ENST00000394258 PEG10Q86TG7 708 aaKnown RBP17.04■□□□□ 0.32
RCCD1-201ENST00000394258 RHBDD1Q8TEB9 315 aa17.04■□□□□ 0.32
RCCD1-201ENST00000394258 ABHD3Q8WU67 409 aa17.04■□□□□ 0.32
RCCD1-201ENST00000394258 NTNG2Q96CW9 530 aa17.04■□□□□ 0.32
RCCD1-201ENST00000394258 NECAB3Q96P71 396 aaPredicted RBP17.04■□□□□ 0.32
RCCD1-201ENST00000394258 FAAP24Q9BTP7 215 aa17.04■□□□□ 0.32
RCCD1-201ENST00000394258 TLNRD1Q9H1K6 362 aa17.04■□□□□ 0.32
RCCD1-201ENST00000394258 OR2S2Q9NQN1 319 aa17.04■□□□□ 0.32
RCCD1-201ENST00000394258 GHRLQ9UBU3 117 aa17.04■□□□□ 0.32
RCCD1-201ENST00000394258 DOCK7Q96N67 2140 aa17.04■□□□□ 0.32
RCCD1-201ENST00000394258 TECTAO75443 2155 aa17.04■□□□□ 0.32
RCCD1-201ENST00000394258 A0A1B0GW55 424 aa17.04■□□□□ 0.32
RCCD1-201ENST00000394258 LRRC3CA6NJW4 275 aa17.04■□□□□ 0.32
RCCD1-201ENST00000394258 CRYBA1P05813 215 aa17.04■□□□□ 0.32
RCCD1-201ENST00000394258 DUX4L2P0CJ85 424 aa17.04■□□□□ 0.32
RCCD1-201ENST00000394258 DUX4L3P0CJ86 424 aa17.04■□□□□ 0.32
RCCD1-201ENST00000394258 DUX4L4P0CJ87 422 aa17.04■□□□□ 0.32
RCCD1-201ENST00000394258 DUX4L5P0CJ88 424 aa17.04■□□□□ 0.32
RCCD1-201ENST00000394258 DUX4L6P0CJ89 424 aa17.04■□□□□ 0.32
RCCD1-201ENST00000394258 DUX4L7P0CJ90 424 aa17.04■□□□□ 0.32
RCCD1-201ENST00000394258 CRYGSP22914 178 aa17.04■□□□□ 0.32
RCCD1-201ENST00000394258 GDF1P27539 372 aa17.04■□□□□ 0.32
RCCD1-201ENST00000394258 NPBWR1P48145 328 aa17.04■□□□□ 0.32
RCCD1-201ENST00000394258 CLDN15P56746 228 aa17.04■□□□□ 0.32
RCCD1-201ENST00000394258 CEACAM16Q2WEN9 425 aa17.04■□□□□ 0.32
RCCD1-201ENST00000394258 BATF2Q8N1L9 274 aa17.04■□□□□ 0.32
RCCD1-201ENST00000394258 OR1F12Q8NHA8 337 aa17.04■□□□□ 0.32
RCCD1-201ENST00000394258 CT55Q8WUE5 264 aa17.04■□□□□ 0.32
RCCD1-201ENST00000394258 INTS12Q96CB8 462 aaKnown RBP17.04■□□□□ 0.32
RCCD1-201ENST00000394258 IER2Q9BTL4 223 aa17.04■□□□□ 0.32
RCCD1-201ENST00000394258 TMEM38BQ9NVV0 291 aa17.04■□□□□ 0.32
RCCD1-201ENST00000394258 DUX4Q9UBX2 424 aa17.04■□□□□ 0.32
RCCD1-201ENST00000394258 LOXL2Q9Y4K0 774 aa17.04■□□□□ 0.32
RCCD1-201ENST00000394258 IGKV1-27A0A075B6S5 117 aa17.03■□□□□ 0.32
RCCD1-201ENST00000394258 ZNF716A6NP11 495 aa17.03■□□□□ 0.32
RCCD1-201ENST00000394258 MSTNO14793 375 aa17.03■□□□□ 0.32
RCCD1-201ENST00000394258 CSTBP04080 98 aaKnown RBP17.03■□□□□ 0.32
RCCD1-201ENST00000394258 RPS2P15880 293 aaKnown RBP17.03■□□□□ 0.32
RCCD1-201ENST00000394258 ALDH3B1P43353 468 aa17.03■□□□□ 0.32
RCCD1-201ENST00000394258 SWI5Q1ZZU3 235 aa17.03■□□□□ 0.32
RCCD1-201ENST00000394258 FAM209BQ5JX69 171 aa17.03■□□□□ 0.32
RCCD1-201ENST00000394258 DYRK2Q92630 601 aa17.03■□□□□ 0.32
RCCD1-201ENST00000394258 ZNF407Q9C0G0 2248 aa17.03■□□□□ 0.32
RCCD1-201ENST00000394258 CEACAM18A8MTB9 384 aa17.03■□□□□ 0.32
RCCD1-201ENST00000394258 EIF3GO75821 320 aaKnown RBP eCLIP17.03■□□□□ 0.32
RCCD1-201ENST00000394258 APOC1P02654 83 aa17.03■□□□□ 0.32
RCCD1-201ENST00000394258 OPRM1P35372 400 aa17.03■□□□□ 0.32
RCCD1-201ENST00000394258 TAS2R46P59540 309 aa17.03■□□□□ 0.32
RCCD1-201ENST00000394258 POLR2GP62487 172 aaKnown RBP eCLIP17.03■□□□□ 0.32
RCCD1-201ENST00000394258 PDCD1Q15116 288 aa17.03■□□□□ 0.32
RCCD1-201ENST00000394258 RAB35Q15286 201 aa17.03■□□□□ 0.32
RCCD1-201ENST00000394258 RSU1Q15404 277 aa17.03■□□□□ 0.32
RCCD1-201ENST00000394258 SLC16A14Q7RTX9 510 aa17.03■□□□□ 0.32
RCCD1-201ENST00000394258 SF3B5Q9BWJ5 86 aaKnown RBP17.03■□□□□ 0.32
RCCD1-201ENST00000394258 BIN3Q9NQY0 253 aa17.03■□□□□ 0.32
RCCD1-201ENST00000394258 TRBV6-7A0A0A0MS04 114 aa17.02■□□□□ 0.32
RCCD1-201ENST00000394258 FAM221AA4D161 298 aa17.02■□□□□ 0.32
RCCD1-201ENST00000394258 SERPINE3A8MV23 424 aa17.02■□□□□ 0.32
RCCD1-201ENST00000394258 F8VVB4 439 aa17.02■□□□□ 0.32
RCCD1-201ENST00000394258 F8VWA3 439 aa17.02■□□□□ 0.32
RCCD1-201ENST00000394258 ACTL6AO96019 429 aa17.02■□□□□ 0.32
RCCD1-201ENST00000394258 S100A10P60903 97 aa17.02■□□□□ 0.32
RCCD1-201ENST00000394258 PSG4Q00888 419 aa17.02■□□□□ 0.32
RCCD1-201ENST00000394258 SRYQ05066 204 aa17.02■□□□□ 0.32
RCCD1-201ENST00000394258 PLEKHN1Q494U1 663 aaPredicted RBP17.02■□□□□ 0.32
RCCD1-201ENST00000394258 PEAR1Q5VY43 1037 aaPredicted RBP17.02■□□□□ 0.32
RCCD1-201ENST00000394258 RBMS3Q6XE24 437 aaKnown RBP17.02■□□□□ 0.32
RCCD1-201ENST00000394258 BAP18Q8IXM2 172 aa17.02■□□□□ 0.32
RCCD1-201ENST00000394258 P4HTMQ9NXG6 502 aa17.02■□□□□ 0.32
RCCD1-201ENST00000394258 SFTPBP07988 381 aa17.02■□□□□ 0.31
RCCD1-201ENST00000394258 PTGER4P35408 488 aa17.02■□□□□ 0.31
RCCD1-201ENST00000394258 C9orf135Q5VTT2 229 aa17.02■□□□□ 0.31
RCCD1-201ENST00000394258 H3F3CQ6NXT2 135 aa17.02■□□□□ 0.31
RCCD1-201ENST00000394258 SVBPQ8N300 66 aa17.02■□□□□ 0.31
RCCD1-201ENST00000394258 ZNF2Q9BSG1 426 aaPredicted RBP17.02■□□□□ 0.31
RCCD1-201ENST00000394258 TM2D1Q9BX74 207 aa17.02■□□□□ 0.31
RCCD1-201ENST00000394258 RAB18Q9NP72 206 aa17.02■□□□□ 0.31
RCCD1-201ENST00000394258 C19orf67A6NJJ6 358 aa17.01■□□□□ 0.31
RCCD1-201ENST00000394258 H2AFB1P0C5Y9 115 aa17.01■□□□□ 0.31
RCCD1-201ENST00000394258 TPT1P13693 172 aaKnown RBP17.01■□□□□ 0.31
RCCD1-201ENST00000394258 CYB561P49447 251 aa17.01■□□□□ 0.31
RCCD1-201ENST00000394258 FOXB1Q99853 325 aa17.01■□□□□ 0.31
RCCD1-201ENST00000394258 AIMP2Q13155 320 aaKnown RBP17.01■□□□□ 0.31
RCCD1-201ENST00000394258 ZNF585AQ6P3V2 769 aa17.01■□□□□ 0.31
RCCD1-201ENST00000394258 SLC23A3Q6PIS1 610 aa17.01■□□□□ 0.31
RCCD1-201ENST00000394258 C6orf15Q6UXA7 325 aaPredicted RBP17.01■□□□□ 0.31
RCCD1-201ENST00000394258 RXFP4Q8TDU9 374 aa17.01■□□□□ 0.31
RCCD1-201ENST00000394258 SFT2D1Q8WV19 159 aa17.01■□□□□ 0.31
RCCD1-201ENST00000394258 SCGB3A2Q96PL1 93 aa17.01■□□□□ 0.31
RCCD1-201ENST00000394258 FIGNL2A6NMB9 653 aa17■□□□□ 0.31
RCCD1-201ENST00000394258 SNRPEP62304 92 aaKnown RBP17■□□□□ 0.31
RCCD1-201ENST00000394258 CYCSP99999 105 aaKnown RBP17■□□□□ 0.31
RCCD1-201ENST00000394258 OR2V1Q8NHB1 315 aa17■□□□□ 0.31
RCCD1-201ENST00000394258 STOML3Q8TAV4 291 aa17■□□□□ 0.31
RCCD1-201ENST00000394258 KCNE4Q8WWG9 221 aa17■□□□□ 0.31
RCCD1-201ENST00000394258 Q96M66 194 aa17■□□□□ 0.31
RCCD1-201ENST00000394258 PIGMQ9H3S5 423 aa17■□□□□ 0.31
RCCD1-201ENST00000394258 TREM1Q9NP99 234 aa17■□□□□ 0.31
RCCD1-201ENST00000394258 FGF16O43320 207 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms