RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 C1orf123Q9NWV4 160 aa20.54■□□□□ 0.88
LRFN4-202ENST00000393952 TRAPPC2LH3BP13 241 aa20.53■□□□□ 0.88
LRFN4-202ENST00000393952 CSTBP04080 98 aaKnown RBP20.53■□□□□ 0.88
LRFN4-202ENST00000393952 MGMTP16455 207 aa20.53■□□□□ 0.88
LRFN4-202ENST00000393952 COL8A1P27658 744 aa20.53■□□□□ 0.88
LRFN4-202ENST00000393952 DTX2Q86UW9 622 aa20.53■□□□□ 0.88
LRFN4-202ENST00000393952 OR4M1Q8NGD0 313 aa20.53■□□□□ 0.88
LRFN4-202ENST00000393952 TMEM59Q9BXS4 323 aa20.53■□□□□ 0.88
LRFN4-202ENST00000393952 RBFOX1Q9NWB1 397 aaKnown RBP20.53■□□□□ 0.88
LRFN4-202ENST00000393952 EXTL2Q9UBQ6 330 aa20.53■□□□□ 0.88
LRFN4-202ENST00000393952 POLDIP2Q9Y2S7 368 aa20.53■□□□□ 0.88
LRFN4-202ENST00000393952 DCHS2Q6V1P9 2916 aa20.52■□□□□ 0.88
LRFN4-202ENST00000393952 TPD52L2O43399 206 aaKnown RBP20.52■□□□□ 0.88
LRFN4-202ENST00000393952 ZNF780AO75290 641 aaPredicted RBP20.52■□□□□ 0.88
LRFN4-202ENST00000393952 RBMXP38159 391 aaKnown RBP20.52■□□□□ 0.88
LRFN4-202ENST00000393952 TLE4Q04727 773 aa20.52■□□□□ 0.88
LRFN4-202ENST00000393952 GPR176Q14439 515 aa20.52■□□□□ 0.88
LRFN4-202ENST00000393952 FAM209AQ5JX71 171 aa20.52■□□□□ 0.88
LRFN4-202ENST00000393952 METAP1DQ6UB28 335 aaPredicted RBP20.52■□□□□ 0.88
LRFN4-202ENST00000393952 WDR82Q6UXN9 313 aa20.52■□□□□ 0.88
LRFN4-202ENST00000393952 MFSD4AQ8N468 514 aa20.52■□□□□ 0.88
LRFN4-202ENST00000393952 TRAF4Q9BUZ4 470 aaPredicted RBP20.52■□□□□ 0.88
LRFN4-202ENST00000393952 LPAR5Q9H1C0 372 aa20.52■□□□□ 0.88
LRFN4-202ENST00000393952 ATG5Q9H1Y0 275 aa20.52■□□□□ 0.88
LRFN4-202ENST00000393952 CLEC4MQ9H2X3 399 aaPredicted RBP20.52■□□□□ 0.88
LRFN4-202ENST00000393952 DOPEY2Q9Y3R5 2298 aa20.52■□□□□ 0.87
LRFN4-202ENST00000393952 hCG_1807616A0A1W2PRN6 198 aa20.51■□□□□ 0.87
LRFN4-202ENST00000393952 PMELP40967 661 aa20.51■□□□□ 0.87
LRFN4-202ENST00000393952 GATA4P43694 442 aa20.51■□□□□ 0.87
LRFN4-202ENST00000393952 PPOXP50336 477 aa20.51■□□□□ 0.87
LRFN4-202ENST00000393952 CDH24Q86UP0 819 aa20.51■□□□□ 0.87
LRFN4-202ENST00000393952 RAB40AQ8WXH6 277 aa20.51■□□□□ 0.87
LRFN4-202ENST00000393952 SELENOIQ9C0D9 397 aa20.51■□□□□ 0.87
LRFN4-202ENST00000393952 FN3KRPQ9HA64 309 aa20.51■□□□□ 0.87
LRFN4-202ENST00000393952 LAMP3Q9UQV4 416 aa20.51■□□□□ 0.87
LRFN4-202ENST00000393952 INHBBP09529 407 aa20.51■□□□□ 0.87
LRFN4-202ENST00000393952 PGA5P0DJD9 388 aa20.51■□□□□ 0.87
LRFN4-202ENST00000393952 RPS27AP62979 156 aaKnown RBP20.51■□□□□ 0.87
LRFN4-202ENST00000393952 TESK1Q15569 626 aa20.51■□□□□ 0.87
LRFN4-202ENST00000393952 PCGF3Q3KNV8 242 aa20.51■□□□□ 0.87
LRFN4-202ENST00000393952 SPANXN2Q5MJ10 180 aa20.51■□□□□ 0.87
LRFN4-202ENST00000393952 IZUMO1Q8IYV9 350 aa20.51■□□□□ 0.87
LRFN4-202ENST00000393952 OSR2Q8N2R0 312 aa20.51■□□□□ 0.87
LRFN4-202ENST00000393952 S100A16Q96FQ6 103 aaKnown RBP20.51■□□□□ 0.87
LRFN4-202ENST00000393952 VRK1Q99986 396 aaPredicted RBP20.51■□□□□ 0.87
LRFN4-202ENST00000393952 NICN1Q9BSH3 213 aa20.51■□□□□ 0.87
LRFN4-202ENST00000393952 EGLN1Q9GZT9 426 aa20.51■□□□□ 0.87
LRFN4-202ENST00000393952 PCDHB16Q9NRJ7 776 aa20.51■□□□□ 0.87
LRFN4-202ENST00000393952 DECR2Q9NUI1 292 aa20.51■□□□□ 0.87
LRFN4-202ENST00000393952 AKR7A2O43488 359 aa20.5■□□□□ 0.87
LRFN4-202ENST00000393952 GTF2F2P13984 249 aa20.5■□□□□ 0.87
LRFN4-202ENST00000393952 ETV6P41212 452 aa20.5■□□□□ 0.87
LRFN4-202ENST00000393952 GMFBP60983 142 aa20.5■□□□□ 0.87
LRFN4-202ENST00000393952 HOXA4Q00056 320 aaPredicted RBP20.5■□□□□ 0.87
LRFN4-202ENST00000393952 ELP2Q6IA86 826 aa20.5■□□□□ 0.87
LRFN4-202ENST00000393952 POC1AQ8NBT0 407 aa20.5■□□□□ 0.87
LRFN4-202ENST00000393952 Q8NFD4 153 aa20.5■□□□□ 0.87
LRFN4-202ENST00000393952 NRIP2Q9BQI9 281 aa20.5■□□□□ 0.87
LRFN4-202ENST00000393952 SAP30LQ9HAJ7 183 aa20.5■□□□□ 0.87
LRFN4-202ENST00000393952 GCM1Q9NP62 436 aa20.5■□□□□ 0.87
LRFN4-202ENST00000393952 V9GYH0 126 aa20.5■□□□□ 0.87
LRFN4-202ENST00000393952 DSCAMO60469 2012 aa20.49■□□□□ 0.87
LRFN4-202ENST00000393952 A0A0A6YYD4 124 aa20.49■□□□□ 0.87
LRFN4-202ENST00000393952 TNFRSF1AP19438 455 aa20.49■□□□□ 0.87
LRFN4-202ENST00000393952 CDK2P24941 298 aa20.49■□□□□ 0.87
LRFN4-202ENST00000393952 TALDO1P37837 337 aa20.49■□□□□ 0.87
LRFN4-202ENST00000393952 ERVK11-1P61568 191 aa20.49■□□□□ 0.87
LRFN4-202ENST00000393952 PIGYQ3MUY2 71 aa20.49■□□□□ 0.87
LRFN4-202ENST00000393952 OR51T1Q8NGJ9 327 aa20.49■□□□□ 0.87
LRFN4-202ENST00000393952 LRRC29Q8WV35 223 aa20.49■□□□□ 0.87
LRFN4-202ENST00000393952 S100ZQ8WXG8 99 aa20.49■□□□□ 0.87
LRFN4-202ENST00000393952 Q96M66 194 aa20.49■□□□□ 0.87
LRFN4-202ENST00000393952 URM1Q9BTM9 101 aaKnown RBP20.49■□□□□ 0.87
LRFN4-202ENST00000393952 PLEKHF2Q9H8W4 249 aa20.49■□□□□ 0.87
LRFN4-202ENST00000393952 TREM2Q9NZC2 230 aa20.49■□□□□ 0.87
LRFN4-202ENST00000393952 IL36RNQ9UBH0 155 aa20.49■□□□□ 0.87
LRFN4-202ENST00000393952 DYSFO75923 2080 aa20.49■□□□□ 0.87
LRFN4-202ENST00000393952 FABP12A6NFH5 140 aa20.48■□□□□ 0.87
LRFN4-202ENST00000393952 NOS1APO75052 506 aaPredicted RBP20.48■□□□□ 0.87
LRFN4-202ENST00000393952 ACAA1P09110 424 aaPredicted RBP20.48■□□□□ 0.87
LRFN4-202ENST00000393952 VEGFCP49767 419 aa20.48■□□□□ 0.87
LRFN4-202ENST00000393952 SNU13P55769 128 aaKnown RBP20.48■□□□□ 0.87
LRFN4-202ENST00000393952 FGF12P61328 243 aa20.48■□□□□ 0.87
LRFN4-202ENST00000393952 MOGAT2Q3SYC2 334 aa20.48■□□□□ 0.87
LRFN4-202ENST00000393952 TGIF2LYQ8IUE0 185 aa20.48■□□□□ 0.87
LRFN4-202ENST00000393952 ZNF295-AS1Q8N0V1 137 aa20.48■□□□□ 0.87
LRFN4-202ENST00000393952 TM2D1Q9BX74 207 aa20.48■□□□□ 0.87
LRFN4-202ENST00000393952 CACNG6Q9BXT2 260 aa20.48■□□□□ 0.87
LRFN4-202ENST00000393952 GCN1Q92616 2671 aaKnown RBP20.48■□□□□ 0.87
LRFN4-202ENST00000393952 METTL21EPA6NDL7 271 aa20.47■□□□□ 0.87
LRFN4-202ENST00000393952 CLDN25C9JDP6 229 aa20.47■□□□□ 0.87
LRFN4-202ENST00000393952 WNT9BO14905 357 aa20.47■□□□□ 0.87
LRFN4-202ENST00000393952 PRKACAP17612 351 aa20.47■□□□□ 0.87
LRFN4-202ENST00000393952 RBM11P57052 281 aaKnown RBP20.47■□□□□ 0.87
LRFN4-202ENST00000393952 FAM131AQ6UXB0 335 aa20.47■□□□□ 0.87
LRFN4-202ENST00000393952 Q8IYB0 196 aa20.47■□□□□ 0.87
LRFN4-202ENST00000393952 FAM58AQ8N1B3 248 aa20.47■□□□□ 0.87
LRFN4-202ENST00000393952 OR10Z1Q8NGY1 313 aa20.47■□□□□ 0.87
LRFN4-202ENST00000393952 EMG1Q92979 244 aaKnown RBP20.47■□□□□ 0.87
LRFN4-202ENST00000393952 ERGIC1Q969X5 290 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms