RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 MOB1BQ7L9L4 216 aa14.61□□□□□ -0.07
SCN3B-202ENST00000392770 ZFP62Q8NB50 900 aaPredicted RBP14.61□□□□□ -0.07
SCN3B-202ENST00000392770 PSMB3P49720 205 aa14.6□□□□□ -0.07
SCN3B-202ENST00000392770 THBS3P49746 956 aa14.6□□□□□ -0.07
SCN3B-202ENST00000392770 QPCTLQ9NXS2 382 aa14.6□□□□□ -0.07
SCN3B-202ENST00000392770 OR5B21A6NL26 309 aa14.6□□□□□ -0.07
SCN3B-202ENST00000392770 AQP7O14520 342 aa14.6□□□□□ -0.07
SCN3B-202ENST00000392770 SFT2D2O95562 160 aa14.6□□□□□ -0.07
SCN3B-202ENST00000392770 C9orf152Q5JTZ5 239 aa14.6□□□□□ -0.07
SCN3B-202ENST00000392770 NEURL2Q9BR09 285 aa14.6□□□□□ -0.07
SCN3B-202ENST00000392770 ESRP2Q9H6T0 727 aaKnown RBP14.6□□□□□ -0.07
SCN3B-202ENST00000392770 BIN3Q9NQY0 253 aa14.6□□□□□ -0.07
SCN3B-202ENST00000392770 HS3ST3B1Q9Y662 390 aa14.6□□□□□ -0.07
SCN3B-202ENST00000392770 BCL2L11O43521 198 aa14.6□□□□□ -0.07
SCN3B-202ENST00000392770 TXNDC12O95881 172 aa14.6□□□□□ -0.07
SCN3B-202ENST00000392770 PDGFAP04085 211 aa14.6□□□□□ -0.07
SCN3B-202ENST00000392770 OR13C7P0DN81 318 aa14.6□□□□□ -0.07
SCN3B-202ENST00000392770 C11orf87Q6NUJ2 197 aa14.6□□□□□ -0.07
SCN3B-202ENST00000392770 DAZAP1Q96EP5 407 aaKnown RBP14.6□□□□□ -0.07
SCN3B-202ENST00000392770 PFDN5Q99471 154 aa14.6□□□□□ -0.07
SCN3B-202ENST00000392770 C9orf170A2RU37 121 aa14.6□□□□□ -0.07
SCN3B-202ENST00000392770 GPR37O15354 613 aa14.6□□□□□ -0.07
SCN3B-202ENST00000392770 TNFAIP6P98066 277 aaPredicted RBP14.6□□□□□ -0.07
SCN3B-202ENST00000392770 HLXQ14774 488 aaPredicted RBP14.6□□□□□ -0.07
SCN3B-202ENST00000392770 FBXW5Q969U6 566 aa14.6□□□□□ -0.07
SCN3B-202ENST00000392770 ARV1Q9H2C2 271 aa14.6□□□□□ -0.07
SCN3B-202ENST00000392770 PIGMQ9H3S5 423 aa14.6□□□□□ -0.07
SCN3B-202ENST00000392770 RELL2Q8NC24 303 aaPredicted RBP14.59□□□□□ -0.07
SCN3B-202ENST00000392770 PLPPR2Q96GM1 343 aa14.59□□□□□ -0.07
SCN3B-202ENST00000392770 AICDAQ9GZX7 198 aa14.59□□□□□ -0.07
SCN3B-202ENST00000392770 KIAA1456Q9P272 454 aa14.59□□□□□ -0.07
SCN3B-202ENST00000392770 DEFB108AA8MXU0 73 aa14.59□□□□□ -0.07
SCN3B-202ENST00000392770 SOCS1O15524 211 aa14.59□□□□□ -0.07
SCN3B-202ENST00000392770 H2AFB1P0C5Y9 115 aa14.59□□□□□ -0.07
SCN3B-202ENST00000392770 CT45A6P0DMU7 189 aa14.59□□□□□ -0.07
SCN3B-202ENST00000392770 CT45A5P0DMU8 189 aa14.59□□□□□ -0.07
SCN3B-202ENST00000392770 CT45A7P0DMV0 189 aa14.59□□□□□ -0.07
SCN3B-202ENST00000392770 CT45A1Q5HYN5 189 aa14.59□□□□□ -0.07
SCN3B-202ENST00000392770 SOHLH1Q5JUK2 328 aa14.59□□□□□ -0.07
SCN3B-202ENST00000392770 CT45A3Q8NHU0 189 aa14.59□□□□□ -0.07
SCN3B-202ENST00000392770 CA5BP1Q8WTZ4 195 aa14.59□□□□□ -0.07
SCN3B-202ENST00000392770 SLC35E1Q96K37 410 aa14.59□□□□□ -0.07
SCN3B-202ENST00000392770 GPX7Q96SL4 187 aaPredicted RBP14.59□□□□□ -0.07
SCN3B-202ENST00000392770 ZNF485Q8NCK3 441 aa14.59□□□□□ -0.07
SCN3B-202ENST00000392770 OR10P1Q8NGE3 313 aa14.59□□□□□ -0.07
SCN3B-202ENST00000392770 STRAPQ9Y3F4 350 aaKnown RBP14.59□□□□□ -0.07
SCN3B-202ENST00000392770 RFPL4AA6NLU0 287 aa14.59□□□□□ -0.07
SCN3B-202ENST00000392770 RFPL4AL1F8VTS6 287 aa14.59□□□□□ -0.07
SCN3B-202ENST00000392770 ZIC2O95409 532 aaPredicted RBP14.59□□□□□ -0.07
SCN3B-202ENST00000392770 DHRS2Q13268 280 aa14.59□□□□□ -0.07
SCN3B-202ENST00000392770 ERGIC1Q969X5 290 aa14.59□□□□□ -0.07
SCN3B-202ENST00000392770 GMPPAQ96IJ6 420 aaPredicted RBP14.59□□□□□ -0.07
SCN3B-202ENST00000392770 UPK3AO75631 287 aa14.59□□□□□ -0.07
SCN3B-202ENST00000392770 RPL35P42766 123 aaKnown RBP14.59□□□□□ -0.07
SCN3B-202ENST00000392770 GNPNAT1Q96EK6 184 aaPredicted RBP14.59□□□□□ -0.07
SCN3B-202ENST00000392770 MYOZ1Q9NP98 299 aaPredicted RBP14.59□□□□□ -0.07
SCN3B-202ENST00000392770 BTBD17A6NE02 478 aa14.58□□□□□ -0.07
SCN3B-202ENST00000392770 PGA4P0DJD7 388 aa14.58□□□□□ -0.07
SCN3B-202ENST00000392770 PGA3P0DJD8 388 aa14.58□□□□□ -0.07
SCN3B-202ENST00000392770 OR5AP2Q8NGF4 316 aa14.58□□□□□ -0.07
SCN3B-202ENST00000392770 GNB4Q9HAV0 340 aa14.58□□□□□ -0.07
SCN3B-202ENST00000392770 PCOLCEQ15113 449 aa14.58□□□□□ -0.08
SCN3B-202ENST00000392770 LFNGQ8NES3 379 aa14.58□□□□□ -0.08
SCN3B-202ENST00000392770 ADAT3Q96EY9 351 aaPredicted RBP14.58□□□□□ -0.08
SCN3B-202ENST00000392770 TRMT61AQ96FX7 289 aaKnown RBP14.58□□□□□ -0.08
SCN3B-202ENST00000392770 ERRFI1Q9UJM3 462 aaPredicted RBP14.58□□□□□ -0.08
SCN3B-202ENST00000392770 MEX3AA1L020 520 aaKnown RBP14.58□□□□□ -0.08
SCN3B-202ENST00000392770 TOR2AQ5JU69 321 aa14.58□□□□□ -0.08
SCN3B-202ENST00000392770 OR8U1Q8NH10 309 aa14.58□□□□□ -0.08
SCN3B-202ENST00000392770 MARVELD1Q9BSK0 173 aa14.58□□□□□ -0.08
SCN3B-202ENST00000392770 LAMP3Q9UQV4 416 aa14.58□□□□□ -0.08
SCN3B-202ENST00000392770 GNG10P50151 68 aa14.58□□□□□ -0.08
SCN3B-202ENST00000392770 PMP22Q01453 160 aa14.57□□□□□ -0.08
SCN3B-202ENST00000392770 ZNF75AQ96N20 296 aa14.57□□□□□ -0.08
SCN3B-202ENST00000392770 RPS10-NUDT3A0A1W2PQS6 291 aa14.57□□□□□ -0.08
SCN3B-202ENST00000392770 RPS10P46783 165 aaKnown RBP14.57□□□□□ -0.08
SCN3B-202ENST00000392770 RAG2P55895 527 aa14.57□□□□□ -0.08
SCN3B-202ENST00000392770 OR10AD1Q8NGE0 317 aa14.57□□□□□ -0.08
SCN3B-202ENST00000392770 C3orf85A0A1B0GTC6 90 aa14.57□□□□□ -0.08
SCN3B-202ENST00000392770 GEMIN2O14893 280 aaKnown RBP14.57□□□□□ -0.08
SCN3B-202ENST00000392770 NKX2-8O15522 239 aa14.57□□□□□ -0.08
SCN3B-202ENST00000392770 FBXW9Q5XUX1 488 aa14.57□□□□□ -0.08
SCN3B-202ENST00000392770 Q6ZRG5 221 aa14.57□□□□□ -0.08
SCN3B-202ENST00000392770 CHRNA10Q9GZZ6 450 aa14.57□□□□□ -0.08
SCN3B-202ENST00000392770 IGKV1D-42A0A075B6H8 117 aa14.57□□□□□ -0.08
SCN3B-202ENST00000392770 GALR2O43603 387 aaPredicted RBP14.57□□□□□ -0.08
SCN3B-202ENST00000392770 GNB2P62879 340 aa14.57□□□□□ -0.08
SCN3B-202ENST00000392770 FAM74A1Q5RGS3 127 aa14.57□□□□□ -0.08
SCN3B-202ENST00000392770 DUSP18Q8NEJ0 188 aa14.57□□□□□ -0.08
SCN3B-202ENST00000392770 CIB3Q96Q77 187 aaPredicted RBP14.57□□□□□ -0.08
SCN3B-202ENST00000392770 RAB18Q9NP72 206 aa14.57□□□□□ -0.08
SCN3B-202ENST00000392770 TMEM251Q8N6I4 163 aa14.57□□□□□ -0.08
SCN3B-202ENST00000392770 MS4A18H0YCH9 400 aa14.56□□□□□ -0.08
SCN3B-202ENST00000392770 DCTN6O00399 190 aa14.56□□□□□ -0.08
SCN3B-202ENST00000392770 MS4A18Q3C1V0 323 aa14.56□□□□□ -0.08
SCN3B-202ENST00000392770 M0R1X1 148 aa14.56□□□□□ -0.08
SCN3B-202ENST00000392770 PNPP00491 289 aa14.56□□□□□ -0.08
SCN3B-202ENST00000392770 TTRP02766 147 aa14.56□□□□□ -0.08
SCN3B-202ENST00000392770 MMP16P51512 607 aa14.56□□□□□ -0.08
SCN3B-202ENST00000392770 IL34Q6ZMJ4 242 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms