RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 YIPF5Q969M3 257 aa11.51□□□□□ -0.57
PTPRN2-203ENST00000389418 VWCEQ96DN2 955 aa11.51□□□□□ -0.57
PTPRN2-203ENST00000389418 TRMT61AQ96FX7 289 aaKnown RBP11.51□□□□□ -0.57
PTPRN2-203ENST00000389418 HIF1ANQ9NWT6 349 aa11.51□□□□□ -0.57
PTPRN2-203ENST00000389418 TAAR3PQ9P1P4 343 aa11.51□□□□□ -0.57
PTPRN2-203ENST00000389418 IL17BQ9UHF5 180 aa11.51□□□□□ -0.57
PTPRN2-203ENST00000389418 FGF5P12034 268 aa11.51□□□□□ -0.57
PTPRN2-203ENST00000389418 C17orf78Q8N4C9 275 aa11.51□□□□□ -0.57
PTPRN2-203ENST00000389418 RND1Q92730 232 aa11.51□□□□□ -0.57
PTPRN2-203ENST00000389418 PTP4A1Q93096 173 aa11.51□□□□□ -0.57
PTPRN2-203ENST00000389418 OR5H14A6NHG9 310 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 M6PRP20645 277 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 GABRA4P48169 554 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 RAG2P55895 527 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 PRDX4Q13162 271 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 MARC2Q969Z3 335 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 TCEAL7Q9BRU2 100 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 A0A1W2PQM1 296 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 LNP1A1A4G5 178 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 C3orf80F5H4A9 247 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 SSX4O60224 188 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 GFRA3O60609 400 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 SP9P0CG40 484 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 CA6P23280 308 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 ZBTB25P24278 435 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 MPGP29372 298 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 RPL35P42766 123 aaKnown RBP11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 CSN1S1P47710 185 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 RAB7AP51149 207 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 PPP1CBP62140 327 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 C9orf40Q8IXQ3 194 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 GPA33Q99795 319 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 CSAG2Q9Y5P2 127 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 PUS1Q9Y606 427 aaKnown RBP eCLIP11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 SHANK1Q9Y566 2161 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 LRP3O75074 770 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 H2AFB1P0C5Y9 115 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 LIFP15018 202 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 HIST1H1DP16402 221 aaKnown RBP11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 VMA21Q3ZAQ7 101 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 TUSC5Q8IXB3 177 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 OR52B4Q8NGK2 314 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 CCL17Q92583 94 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 RAB1BQ9H0U4 201 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 SLC26A1Q9H2B4 701 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 PTPRFP10586 1907 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 PDCD6O75340 191 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 YIF1AO95070 293 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 MT-ND4LP03901 98 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 CD3EP07766 207 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 ACKR3P25106 362 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 OR2M3Q8NG83 312 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 FGF11Q92914 225 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 PINX1Q96BK5 328 aaKnown RBP11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 PILRAQ9UKJ1 303 aa11.5□□□□□ -0.57
PTPRN2-203ENST00000389418 NGFP01138 241 aa11.49□□□□□ -0.57
PTPRN2-203ENST00000389418 ZFP36L2P47974 494 aaKnown RBP11.49□□□□□ -0.57
PTPRN2-203ENST00000389418 SELENOPP49908 381 aa11.49□□□□□ -0.57
PTPRN2-203ENST00000389418 RAB5CP51148 216 aa11.49□□□□□ -0.57
PTPRN2-203ENST00000389418 SPANXN5Q5MJ07 72 aa11.49□□□□□ -0.57
PTPRN2-203ENST00000389418 THNSL2Q86YJ6 484 aa11.49□□□□□ -0.57
PTPRN2-203ENST00000389418 ZNF485Q8NCK3 441 aa11.49□□□□□ -0.57
PTPRN2-203ENST00000389418 LIN37Q96GY3 246 aaPredicted RBP11.49□□□□□ -0.57
PTPRN2-203ENST00000389418 CXXC4Q9H2H0 198 aa11.49□□□□□ -0.57
PTPRN2-203ENST00000389418 GAL3ST2Q9H3Q3 398 aa11.49□□□□□ -0.57
PTPRN2-203ENST00000389418 SLC52A3Q9NQ40 469 aa11.49□□□□□ -0.57
PTPRN2-203ENST00000389418 HRASP01112 189 aa11.49□□□□□ -0.57
PTPRN2-203ENST00000389418 ASB5Q8WWX0 329 aa11.49□□□□□ -0.57
PTPRN2-203ENST00000389418 RAB1CQ92928 201 aa11.49□□□□□ -0.57
PTPRN2-203ENST00000389418 PDGFAP04085 211 aa11.49□□□□□ -0.57
PTPRN2-203ENST00000389418 TGM1P22735 817 aa11.49□□□□□ -0.57
PTPRN2-203ENST00000389418 FPR2P25090 351 aa11.49□□□□□ -0.57
PTPRN2-203ENST00000389418 RPL12P30050 165 aaKnown RBP11.49□□□□□ -0.57
PTPRN2-203ENST00000389418 TAGLN2P37802 199 aaKnown RBP11.49□□□□□ -0.57
PTPRN2-203ENST00000389418 MVDP53602 400 aa11.49□□□□□ -0.57
PTPRN2-203ENST00000389418 GNB1P62873 340 aa11.49□□□□□ -0.57
PTPRN2-203ENST00000389418 ARL16Q0P5N6 197 aa11.49□□□□□ -0.57
PTPRN2-203ENST00000389418 ZXDCQ2QGD7 858 aaPredicted RBP11.49□□□□□ -0.57
PTPRN2-203ENST00000389418 CMBLQ96DG6 245 aa11.49□□□□□ -0.57
PTPRN2-203ENST00000389418 PILRBQ9UKJ0 227 aa11.49□□□□□ -0.57
PTPRN2-203ENST00000389418 hADV38S2A0JD32 116 aa11.48□□□□□ -0.57
PTPRN2-203ENST00000389418 PYCARD-AS1I3L0S3 204 aa11.48□□□□□ -0.57
PTPRN2-203ENST00000389418 AKR7A2O43488 359 aa11.48□□□□□ -0.57
PTPRN2-203ENST00000389418 TIAF1O95411 115 aa11.48□□□□□ -0.57
PTPRN2-203ENST00000389418 SP1P08047 785 aa11.48□□□□□ -0.57
PTPRN2-203ENST00000389418 BPIFB3P59826 476 aa11.48□□□□□ -0.57
PTPRN2-203ENST00000389418 FAM181AQ8N9Y4 354 aa11.48□□□□□ -0.57
PTPRN2-203ENST00000389418 OR2M7Q8NG81 312 aa11.48□□□□□ -0.57
PTPRN2-203ENST00000389418 ZNF721Q8TF20 911 aa11.48□□□□□ -0.57
PTPRN2-203ENST00000389418 SFT2D1Q8WV19 159 aa11.48□□□□□ -0.57
PTPRN2-203ENST00000389418 CLDN23Q96B33 292 aa11.48□□□□□ -0.57
PTPRN2-203ENST00000389418 TNFAIP6P98066 277 aaPredicted RBP11.48□□□□□ -0.57
PTPRN2-203ENST00000389418 COL19A1Q14993 1142 aa11.48□□□□□ -0.57
PTPRN2-203ENST00000389418 ACOT6Q3I5F7 207 aaPredicted RBP11.48□□□□□ -0.57
PTPRN2-203ENST00000389418 SCARF2Q96GP6 870 aaPredicted RBP11.48□□□□□ -0.57
PTPRN2-203ENST00000389418 ZNF251Q9BRH9 671 aa11.48□□□□□ -0.57
PTPRN2-203ENST00000389418 TGIF2Q9GZN2 237 aa11.48□□□□□ -0.57
PTPRN2-203ENST00000389418 MTFP1Q9UDX5 166 aa11.48□□□□□ -0.57
PTPRN2-203ENST00000389418 KPTNQ9Y664 436 aa11.48□□□□□ -0.57
PTPRN2-203ENST00000389418 OTOFQ9HC10 1997 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms