RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 CCDC47Q96A33 483 aaKnown RBP-0.21□□□□□ -2.44
SNORD28-201ENST00000384706 CLDN23Q96B33 292 aa-0.21□□□□□ -2.44
SNORD28-201ENST00000384706 TMIGD2Q96BF3 282 aa-0.21□□□□□ -2.44
SNORD28-201ENST00000384706 APH1AQ96BI3 265 aa-0.21□□□□□ -2.44
SNORD28-201ENST00000384706 MRPS24Q96EL2 167 aaKnown RBP-0.21□□□□□ -2.44
SNORD28-201ENST00000384706 ADTRPQ96IZ2 230 aa-0.21□□□□□ -2.44
SNORD28-201ENST00000384706 TEAD3Q99594 435 aa-0.21□□□□□ -2.44
SNORD28-201ENST00000384706 Q9BRP9 147 aa-0.21□□□□□ -2.44
SNORD28-201ENST00000384706 MTG1Q9BT17 334 aaPredicted RBP-0.21□□□□□ -2.44
SNORD28-201ENST00000384706 MRPL20Q9BYC9 149 aaKnown RBP-0.21□□□□□ -2.44
SNORD28-201ENST00000384706 SRRQ9GZT4 340 aa-0.21□□□□□ -2.44
SNORD28-201ENST00000384706 RAB33BQ9H082 229 aa-0.21□□□□□ -2.44
SNORD28-201ENST00000384706 RIBC2Q9H4K1 309 aa-0.21□□□□□ -2.44
SNORD28-201ENST00000384706 RMND5AQ9H871 391 aa-0.21□□□□□ -2.44
SNORD28-201ENST00000384706 POLE3Q9NRF9 147 aa-0.21□□□□□ -2.44
SNORD28-201ENST00000384706 TMEM100Q9NV29 134 aa-0.21□□□□□ -2.44
SNORD28-201ENST00000384706 VAX2Q9UIW0 290 aa-0.21□□□□□ -2.44
SNORD28-201ENST00000384706 FBXL3Q9UKT7 428 aa-0.21□□□□□ -2.44
SNORD28-201ENST00000384706 NDRG2Q9UN36 371 aaKnown RBP-0.21□□□□□ -2.44
SNORD28-201ENST00000384706 SNX6Q9UNH7 406 aa-0.21□□□□□ -2.44
SNORD28-201ENST00000384706 STK38LQ9Y2H1 464 aa-0.21□□□□□ -2.44
SNORD28-201ENST00000384706 PPIL1Q9Y3C6 166 aa-0.21□□□□□ -2.44
SNORD28-201ENST00000384706 ASB3Q9Y575 518 aa-0.21□□□□□ -2.44
SNORD28-201ENST00000384706 USH1CQ9Y6N9 552 aa-0.21□□□□□ -2.44
SNORD28-201ENST00000384706 URGCP-MRPS24S4R325 110 aa-0.21□□□□□ -2.44
SNORD28-201ENST00000384706 USP42Q9H9J4 1324 aaKnown RBP-0.21□□□□□ -2.44
SNORD28-201ENST00000384706 NPHP4O75161 1426 aaPredicted RBP-0.21□□□□□ -2.44
SNORD28-201ENST00000384706 TNRC6BQ9UPQ9 1833 aaKnown RBP-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 HRNRQ86YZ3 2850 aaPredicted RBP-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 DISP1Q96F81 1524 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 FRAS1Q86XX4 4008 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 BRWD1Q9NSI6 2320 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 TNRC6AQ8NDV7 1962 aaKnown RBP-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 LOC102725191A0A1B0GVB3 256 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 SLC22A20A6NK97 555 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 OR52A4PA6NMU1 304 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 ANKRD65E5RJM6 399 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 K7EPK0 472 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 M0R3G1 203 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 PRMT5O14744 637 aaPredicted RBP-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 SLC9A3R1O14745 358 aaPredicted RBP-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 LECT2O14960 151 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 ZBTB5O15062 677 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 GYG2O15488 501 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 SMC2O95347 1197 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 PLEKHA8P1O95397 391 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 SERPINA3P01011 423 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 PDYNP01213 254 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 PTHP01270 115 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 ERCC1P07992 297 aaPredicted RBP-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 SNRPAP09012 282 aaKnown RBP-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 PSKH1P11801 424 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 GTF2F2P13984 249 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 CD36P16671 472 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 ZNF24P17028 368 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 GABRG2P18507 467 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 ATF1P18846 271 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 RAB4AP20338 218 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 CXCR1P25024 350 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 S100A2P29034 98 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 IMPA1P29218 277 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 IL12BP29460 328 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 SLC1A1P43005 524 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 FABP6P51161 128 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 AP1S2P56377 157 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 OR2B6P58173 313 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 OR1Q1Q15612 314 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 TMEM241Q24JQ0 296 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 KRTAP6-1Q3LI64 71 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 FBXL19-AS1Q494R0 122 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 HSP90AB3PQ58FF7 597 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 C10orf91Q5T1B1 145 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 C1QTNF12Q5T7M4 302 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 STEAP4Q687X5 459 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 ANGPTL8Q6UXH0 198 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 CERS6Q6ZMG9 384 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 CCDC121Q6ZUS5 278 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 FAM231DQ6ZW35 169 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 PRNTQ86SH4 94 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 HORMAD1Q86X24 394 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 IQCKQ8N0W5 287 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 ZNF619Q8N2I2 560 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 ZNF555Q8NEP9 628 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 LFNGQ8NES3 379 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 OR11G2Q8NGC1 345 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 OR5T3Q8NGG3 340 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 LYPD6BQ8NI32 183 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 ERMNQ8TAM6 284 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 CAPSLQ8WWF8 208 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 RXFP2Q8WXD0 754 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 MAL2Q969L2 176 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 HIST1H2BAQ96A08 127 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 PYURFQ96I23 114 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 PRRC1Q96M27 445 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 Q96M85 177 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 GLT1D1Q96MS3 346 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 GABRG3Q99928 467 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 SLC39A3Q9BRY0 314 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 TAPBPLQ9BX59 468 aa-0.22□□□□□ -2.44
SNORD28-201ENST00000384706 ROPN1BQ9BZX4 212 aaPredicted RBP-0.22□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms