RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 THOC3Q96J01 351 aaKnown RBP4.39□□□□□ -1.71
PTPRD-203ENST00000381196 NDFIP1Q9BT67 221 aa4.39□□□□□ -1.71
PTPRD-203ENST00000381196 RSG1Q9BU20 258 aa4.39□□□□□ -1.71
PTPRD-203ENST00000381196 WDR61Q9GZS3 305 aaKnown RBP4.39□□□□□ -1.71
PTPRD-203ENST00000381196 TMEM167BQ9NRX6 74 aa4.39□□□□□ -1.71
PTPRD-203ENST00000381196 ATXN7L1Q9ULK2 861 aaPredicted RBP4.39□□□□□ -1.71
PTPRD-203ENST00000381196 LSM5Q9Y4Y9 91 aaKnown RBP4.39□□□□□ -1.71
PTPRD-203ENST00000381196 HS3ST3A1Q9Y663 406 aa4.39□□□□□ -1.71
PTPRD-203ENST00000381196 LY96Q9Y6Y9 160 aa4.39□□□□□ -1.71
PTPRD-203ENST00000381196 LRRK2Q5S007 2527 aa4.39□□□□□ -1.71
PTPRD-203ENST00000381196 HEATR5AQ86XA9 2040 aa4.39□□□□□ -1.71
PTPRD-203ENST00000381196 FEZF1A0PJY2 475 aa4.39□□□□□ -1.71
PTPRD-203ENST00000381196 YY2O15391 372 aa4.39□□□□□ -1.71
PTPRD-203ENST00000381196 DRD5P21918 477 aa4.39□□□□□ -1.71
PTPRD-203ENST00000381196 F2RP25116 425 aa4.39□□□□□ -1.71
PTPRD-203ENST00000381196 APOBEC1P41238 236 aaKnown RBP4.39□□□□□ -1.71
PTPRD-203ENST00000381196 NKX2-1P43699 371 aaPredicted RBP4.39□□□□□ -1.71
PTPRD-203ENST00000381196 GABRA4P48169 554 aa4.39□□□□□ -1.71
PTPRD-203ENST00000381196 Q6AWC8 147 aa4.39□□□□□ -1.71
PTPRD-203ENST00000381196 OR8G2PQ6IF36 304 aa4.39□□□□□ -1.71
PTPRD-203ENST00000381196 GFRALQ6UXV0 394 aa4.39□□□□□ -1.71
PTPRD-203ENST00000381196 FCRLAQ7L513 359 aa4.39□□□□□ -1.71
PTPRD-203ENST00000381196 CHST2Q9Y4C5 530 aa4.39□□□□□ -1.71
PTPRD-203ENST00000381196 DENND4AQ7Z401 1863 aa4.39□□□□□ -1.71
PTPRD-203ENST00000381196 TRAV34A0A0B4J273 112 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 ALG1L2C9J202 215 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 J3QR06 171 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 HOXC4P09017 264 aaPredicted RBP4.38□□□□□ -1.71
PTPRD-203ENST00000381196 MEOX1P50221 254 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 OR2G6Q5TZ20 316 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 TCTN3Q6NUS6 607 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 Q6ZSR9 355 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 LINC01465Q8N7H1 131 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 FAAP24Q9BTP7 215 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 MS4A8Q9BY19 250 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 WNT16Q9UBV4 365 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 PPIL1Q9Y3C6 166 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 TICRRQ7Z2Z1 1910 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 ZNF727A8MUV8 499 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 FABP2P12104 132 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 G6PCP35575 357 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 PMVKQ15126 192 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 DMKNQ6E0U4 476 aaPredicted RBP4.38□□□□□ -1.71
PTPRD-203ENST00000381196 STAC2Q6ZMT1 411 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 SLCO4C1Q6ZQN7 724 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 GDF7Q7Z4P5 450 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 ZG16BQ96DA0 208 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 DTD2Q96FN9 168 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 TAAR6Q96RI8 345 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 SAP30LQ9HAJ7 183 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 GSN-AS1Q9NRJ2 163 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 ZNF355PQ9NSJ1 428 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 M0QZ24 198 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 SMAD9O15198 467 aaKnown RBP4.38□□□□□ -1.71
PTPRD-203ENST00000381196 PPP1R17O96001 155 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 QDPRP09417 244 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 NQO2P16083 231 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 HOXA11P31270 313 aaPredicted RBP4.38□□□□□ -1.71
PTPRD-203ENST00000381196 ZNF93P35789 620 aaPredicted RBP4.38□□□□□ -1.71
PTPRD-203ENST00000381196 COMPP49747 757 aaPredicted RBP4.38□□□□□ -1.71
PTPRD-203ENST00000381196 PCBP4P57723 403 aaKnown RBP4.38□□□□□ -1.71
PTPRD-203ENST00000381196 SLC25A26Q70HW3 274 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 TP53INP2Q8IXH6 220 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 TTC9BQ8N6N2 239 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 EDARADDQ8WWZ3 215 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 SLC35A4Q96G79 324 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 AKR1E2Q96JD6 320 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 LINC00052Q96N35 136 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 TNRC6AQ8NDV7 1962 aaKnown RBP4.38□□□□□ -1.71
PTPRD-203ENST00000381196 XRCC2O43543 280 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 PRICKLE3O43900 615 aaPredicted RBP4.38□□□□□ -1.71
PTPRD-203ENST00000381196 GCM2O75603 506 aaPredicted RBP4.38□□□□□ -1.71
PTPRD-203ENST00000381196 CRYBA1P05813 215 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 NGFRP08138 427 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 ACKR3P25106 362 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 GLIPR1P48060 266 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 PTTG1IPP53801 180 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 OR1Q1Q15612 314 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 C10orf91Q5T1B1 145 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 NPWQ8N729 165 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 OR2AE1Q8NHA4 323 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 SGCZQ96LD1 299 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 SAMD8Q96LT4 415 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 DERL3Q96Q80 235 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 KLF16Q9BXK1 252 aaPredicted RBP4.38□□□□□ -1.71
PTPRD-203ENST00000381196 OSGIN2Q9Y236 505 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 PUS1Q9Y606 427 aaKnown RBP eCLIP4.38□□□□□ -1.71
PTPRD-203ENST00000381196 FAM90A9PA6NNJ1 464 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 UPK1AO00322 258 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 TRHRP34981 398 aaPredicted RBP4.38□□□□□ -1.71
PTPRD-203ENST00000381196 TMPRSS3P57727 454 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 SRSF7Q16629 238 aaKnown RBP eCLIP4.38□□□□□ -1.71
PTPRD-203ENST00000381196 VHLLQ6RSH7 139 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 OR52L2PQ8NGH6 319 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 ABCA7Q8IZY2 2146 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 A0A1B0GWJ7 208 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 C2CD4DB7Z1M9 353 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 MT-CO3P00414 261 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 C1QAP02745 245 aa4.38□□□□□ -1.71
PTPRD-203ENST00000381196 ZNF888P0CJ79 500 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms