RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 RIPPLY2Q5TAB7 128 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 HES3Q5TGS1 186 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 GSG1LQ6UXU4 331 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 TUSC5Q8IXB3 177 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 OR5H2Q8NGV7 314 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 COQ8AQ8NI60 647 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 C10orf35Q96D05 121 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 WBP1Q96G27 269 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 CXorf58Q96LI9 332 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 PHB2Q99623 299 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 RTBDNQ9BSG5 229 aaPredicted RBP6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 SH3BGRL2Q9UJC5 107 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 CACNA1HO95180 2353 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 ARID1AO14497 2285 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 DMXL1Q9Y485 3027 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 A0A096LPE4 126 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 IGKV1-12A0A0C4DH73 117 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 A0A1W2PPZ6 126 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 ZNF503-AS2A6NEH8 195 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 DBX1A6NMT0 343 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 C21orf140B9A014 251 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 EEF1E1-BLOC1S5C9J1V9 151 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 TEX46H3BTG2 121 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 BET1O15155 118 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 MRPL33O75394 65 aaKnown RBP6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 DUS4LO95620 317 aaKnown RBP6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 IGKV1D-12P01611 117 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 RPLP1P05386 114 aaKnown RBP6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 EDN3P14138 238 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 HLA-GP17693 338 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 GK2Q14410 553 aaPredicted RBP6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 TAF9Q16594 264 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 PABPC1L2AQ5JQF8 200 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 ZNF660Q6AZW8 331 aaPredicted RBP6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 ARRDC1Q8N5I2 433 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 TMEM251Q8N6I4 163 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 CSNK2A3Q8NEV1 391 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 FNDC9Q8TBE3 224 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 LOXL4Q96JB6 756 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 Q96M66 194 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 CALHM2Q9HA72 323 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 RDH8Q9NYR8 311 aa6.91□□□□□ -1.3
PDLIM5-204ENST00000380176 TRAV20A0A0B4J274 112 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 FIGNL2A6NMB9 653 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 MPTX1A8MV57 137 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 I3L521 148 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 NMBP08949 121 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 CCL2P13500 99 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 GLRA1P23415 457 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 CPT2P23786 658 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 SUPT4H1P63272 117 aaKnown RBP6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 AANATQ16613 207 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 C11orf87Q6NUJ2 197 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 JMJD6Q6NYC1 403 aaPredicted RBP6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 FAHD2BQ6P2I3 314 aaPredicted RBP6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 OVCH2Q7RTZ1 564 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 LHFPL1Q86WI0 220 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 FAHD2AQ96GK7 314 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 FAAP24Q9BTP7 215 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 ZNF701Q9NV72 531 aaPredicted RBP6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 PLEKHJ1Q9NW61 149 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 EHFQ9NZC4 300 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 CHTOPQ9Y3Y2 248 aaKnown RBP6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 IGKV3D-15A0A087WSY6 115 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 hCG_38984A0A1B0GV85 526 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 C13orf42A0A1B0GVH6 325 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 RNF222A6NCQ9 220 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 DHRS7CA6NNS2 312 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 CEACAM18A8MTB9 384 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 NRASP01111 189 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 RLN2P04090 185 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 ZNF708P17019 499 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 OR3A2P47893 321 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 RRADP55042 308 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 ARF1P84077 181 aaKnown RBP6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 SLC9A3R2Q15599 337 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 FAM189A2Q15884 450 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 TMEM128Q5BJH2 165 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 TMEM42Q69YG0 159 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 FAM219AQ8IW50 185 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 BATF2Q8N1L9 274 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 ASB13Q8WXK3 278 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 DYRK2Q92630 601 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 TMEM45BQ96B21 275 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 SPSB1Q96BD6 273 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 TNFSF18Q9UNG2 199 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 OSGIN2Q9Y236 505 aa6.9□□□□□ -1.3
PDLIM5-204ENST00000380176 SERPINE3A8MV23 424 aa6.9□□□□□ -1.31
PDLIM5-204ENST00000380176 ADAP1O75689 374 aa6.9□□□□□ -1.31
PDLIM5-204ENST00000380176 ZNF205O95201 554 aa6.9□□□□□ -1.31
PDLIM5-204ENST00000380176 SFTPBP07988 381 aa6.9□□□□□ -1.31
PDLIM5-204ENST00000380176 SERPINF1P36955 418 aa6.9□□□□□ -1.31
PDLIM5-204ENST00000380176 RBP2P50120 134 aa6.9□□□□□ -1.31
PDLIM5-204ENST00000380176 PDCD1Q15116 288 aa6.9□□□□□ -1.31
PDLIM5-204ENST00000380176 RSU1Q15404 277 aa6.9□□□□□ -1.31
PDLIM5-204ENST00000380176 TGIF1Q15583 401 aa6.9□□□□□ -1.31
PDLIM5-204ENST00000380176 PIGYQ3MUY2 71 aa6.9□□□□□ -1.31
PDLIM5-204ENST00000380176 RPUSD3Q6P087 351 aaKnown RBP6.9□□□□□ -1.31
PDLIM5-204ENST00000380176 LPCAT3Q6P1A2 487 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms